RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 TMEM242Q9NWH2 141 aa11.98□□□□□ -0.49
LINC01220-202ENST00000561000 A0A1B0GW15 77 aa11.97□□□□□ -0.49
LINC01220-202ENST00000561000 TSHBP01222 138 aa11.97□□□□□ -0.49
LINC01220-202ENST00000561000 POLR2KP53803 58 aaKnown RBP11.97□□□□□ -0.49
LINC01220-202ENST00000561000 D6R8Y8 96 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 NPYP01303 97 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 APOC3P02656 99 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 CNBPP62633 177 aaKnown RBP11.96□□□□□ -0.49
LINC01220-202ENST00000561000 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 ATP5L2Q7Z4Y8 100 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 ST20Q9HBF5 79 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 RPS10P5Q9NQ39 176 aa11.96□□□□□ -0.49
LINC01220-202ENST00000561000 LRP1Q07954 4544 aaKnown RBP11.96□□□□□ -0.5
LINC01220-202ENST00000561000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.95□□□□□ -0.5
LINC01220-202ENST00000561000 IGKV3OR2-268A0A0C4DH90 116 aa11.95□□□□□ -0.5
LINC01220-202ENST00000561000 IGKV2-29A2NJV5 120 aaPredicted RBP11.95□□□□□ -0.5
LINC01220-202ENST00000561000 HNRNPA3P51991 378 aaKnown RBP11.95□□□□□ -0.5
LINC01220-202ENST00000561000 IGHV3-64A0A075B6Q5 118 aa11.94□□□□□ -0.5
LINC01220-202ENST00000561000 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.94□□□□□ -0.5
LINC01220-202ENST00000561000 SLPIP03973 132 aa11.94□□□□□ -0.5
LINC01220-202ENST00000561000 TMEM136Q6ZRR5 245 aa11.94□□□□□ -0.5
LINC01220-202ENST00000561000 BTF3L4Q96K17 158 aa11.94□□□□□ -0.5
LINC01220-202ENST00000561000 GAGE12HA6NDE8 117 aa11.93□□□□□ -0.5
LINC01220-202ENST00000561000 I3L3M4 83 aa11.93□□□□□ -0.5
LINC01220-202ENST00000561000 TNFRSF6BO95407 300 aa11.93□□□□□ -0.5
LINC01220-202ENST00000561000 PMCHP20382 165 aa11.93□□□□□ -0.5
LINC01220-202ENST00000561000 CKS2P33552 79 aa11.93□□□□□ -0.5
LINC01220-202ENST00000561000 IMMP2LQ96T52 175 aa11.93□□□□□ -0.5
LINC01220-202ENST00000561000 S100A8P05109 93 aa11.92□□□□□ -0.5
LINC01220-202ENST00000561000 SUMO2P61956 95 aaKnown RBP11.92□□□□□ -0.5
LINC01220-202ENST00000561000 RHEBQ15382 184 aa11.92□□□□□ -0.5
LINC01220-202ENST00000561000 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
LINC01220-202ENST00000561000 TRBV27A0A0K0K1C4 114 aa11.91□□□□□ -0.5
LINC01220-202ENST00000561000 APCSP02743 223 aa11.91□□□□□ -0.5
LINC01220-202ENST00000561000 CHTF8P0CG12 524 aa11.91□□□□□ -0.5
LINC01220-202ENST00000561000 ESDP10768 282 aa11.9□□□□□ -0.5
LINC01220-202ENST00000561000 RNASEKQ6P5S7 137 aaKnown RBP11.9□□□□□ -0.5
LINC01220-202ENST00000561000 CFAP161Q6P656 301 aa11.9□□□□□ -0.5
LINC01220-202ENST00000561000 FAT3Q8TDW7 4589 aa11.9□□□□□ -0.5
LINC01220-202ENST00000561000 TRBV24-1A0A075B6N3 115 aa11.89□□□□□ -0.51
LINC01220-202ENST00000561000 A0A087WYN8 130 aa11.89□□□□□ -0.51
LINC01220-202ENST00000561000 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
LINC01220-202ENST00000561000 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
LINC01220-202ENST00000561000 KIAA1644Q3SXP7 199 aa11.89□□□□□ -0.51
LINC01220-202ENST00000561000 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
LINC01220-202ENST00000561000 HIGD2BQ4VC39 106 aa11.88□□□□□ -0.51
LINC01220-202ENST00000561000 C15orf56Q8N910 161 aa11.88□□□□□ -0.51
LINC01220-202ENST00000561000 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
LINC01220-202ENST00000561000 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
LINC01220-202ENST00000561000 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
LINC01220-202ENST00000561000 SVBPQ8N300 66 aa11.87□□□□□ -0.51
LINC01220-202ENST00000561000 VCYO14598 125 aa11.86□□□□□ -0.51
LINC01220-202ENST00000561000 TCAPO15273 167 aa11.86□□□□□ -0.51
LINC01220-202ENST00000561000 FGF6P10767 208 aa11.86□□□□□ -0.51
LINC01220-202ENST00000561000 SPACA4Q8TDM5 124 aa11.86□□□□□ -0.51
LINC01220-202ENST00000561000 C20orf78Q9BR46 151 aa11.86□□□□□ -0.51
LINC01220-202ENST00000561000 PKHD1L1Q86WI1 4243 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 TRAV9-1A0A075B6T8 112 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 LOC389332A0A1B0GUA5 103 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 H7C423 109 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 SNAPINO95295 136 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 S100PP25815 95 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 COX6A2Q02221 97 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 YPEL4Q96NS1 127 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 PLA2G2DQ9UNK4 145 aa11.85□□□□□ -0.51
LINC01220-202ENST00000561000 PPBPP02775 128 aa11.84□□□□□ -0.51
LINC01220-202ENST00000561000 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
LINC01220-202ENST00000561000 NDUFA5Q16718 116 aa11.84□□□□□ -0.51
LINC01220-202ENST00000561000 PPP1R17O96001 155 aa11.83□□□□□ -0.52
LINC01220-202ENST00000561000 FCER1GP30273 86 aa11.83□□□□□ -0.52
LINC01220-202ENST00000561000 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
LINC01220-202ENST00000561000 Q6ZRU5 148 aa11.83□□□□□ -0.52
LINC01220-202ENST00000561000 PRSS3P2Q8NHM4 247 aa11.83□□□□□ -0.52
LINC01220-202ENST00000561000 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 PHOX2AO14813 284 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 MAJINQ3KP22 176 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 RNASE13Q5GAN3 156 aaKnown RBP11.82□□□□□ -0.52
LINC01220-202ENST00000561000 CBLN2Q8IUK8 224 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 FAM104AQ969W3 186 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 TMEM101Q96IK0 257 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 PLAC8Q9NZF1 115 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 HMCN2Q8NDA2 5059 aa11.82□□□□□ -0.52
LINC01220-202ENST00000561000 XCL1P47992 114 aa11.81□□□□□ -0.52
LINC01220-202ENST00000561000 OR5A1Q8NGJ0 315 aa11.81□□□□□ -0.52
LINC01220-202ENST00000561000 C7orf33Q8WU49 177 aa11.81□□□□□ -0.52
LINC01220-202ENST00000561000 KIR2DL4Q99706 377 aa11.81□□□□□ -0.52
LINC01220-202ENST00000561000 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
LINC01220-202ENST00000561000 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
LINC01220-202ENST00000561000 FOXI1Q12951 378 aa11.8□□□□□ -0.52
LINC01220-202ENST00000561000 MRPL18Q9H0U6 180 aaKnown RBP11.8□□□□□ -0.52
LINC01220-202ENST00000561000 UBE2D4Q9Y2X8 147 aa11.8□□□□□ -0.52
LINC01220-202ENST00000561000 GVQW2A0A096LPI5 108 aaPredicted RBP11.79□□□□□ -0.52
LINC01220-202ENST00000561000 PRSS47A8MTI9 375 aa11.79□□□□□ -0.52
LINC01220-202ENST00000561000 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
LINC01220-202ENST00000561000 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
LINC01220-202ENST00000561000 CCL25O15444 150 aa11.78□□□□□ -0.52
LINC01220-202ENST00000561000 MT1HL1P0DM35 61 aa11.78□□□□□ -0.52
LINC01220-202ENST00000561000 Q6ZUT4 128 aa11.78□□□□□ -0.52
LINC01220-202ENST00000561000 MRPL52Q86TS9 123 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms