RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 LINC00310P59036 64 aa7.13□□□□□ -1.27
TPM1-227ENST00000560970 DAZ4Q86SG3 579 aaKnown RBP7.13□□□□□ -1.27
TPM1-227ENST00000560970 NIT1Q86X76 327 aa7.13□□□□□ -1.27
TPM1-227ENST00000560970 OR10D4PQ8NGN7 298 aa7.13□□□□□ -1.27
TPM1-227ENST00000560970 DAZ3Q9NR90 486 aaKnown RBP7.13□□□□□ -1.27
TPM1-227ENST00000560970 LAMTOR2Q9Y2Q5 125 aa7.13□□□□□ -1.27
TPM1-227ENST00000560970 H7C1H1 209 aa7.12□□□□□ -1.27
TPM1-227ENST00000560970 AMN1Q8IY45 258 aa7.12□□□□□ -1.27
TPM1-227ENST00000560970 ORMDL3Q8N138 153 aa7.12□□□□□ -1.27
TPM1-227ENST00000560970 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
TPM1-227ENST00000560970 CHCHD1Q96BP2 118 aaKnown RBP7.12□□□□□ -1.27
TPM1-227ENST00000560970 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
TPM1-227ENST00000560970 RNF185Q96GF1 192 aa7.12□□□□□ -1.27
TPM1-227ENST00000560970 DNAJC30Q96LL9 226 aa7.12□□□□□ -1.27
TPM1-227ENST00000560970 PLA2G1BP04054 148 aaKnown RBP7.11□□□□□ -1.27
TPM1-227ENST00000560970 IQCJQ1A5X6 159 aa7.11□□□□□ -1.27
TPM1-227ENST00000560970 MRPL51Q4U2R6 128 aaKnown RBP7.11□□□□□ -1.27
TPM1-227ENST00000560970 Q6ZSA8 131 aa7.11□□□□□ -1.27
TPM1-227ENST00000560970 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
TPM1-227ENST00000560970 C12orf57Q99622 126 aa7.11□□□□□ -1.27
TPM1-227ENST00000560970 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
TPM1-227ENST00000560970 D6R8Y8 96 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 NUPR1O60356 82 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 HSBP1O75506 76 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 RAB4AP20338 218 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 PMCHP20382 165 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 CKS2P33552 79 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 MPV17L2Q567V2 206 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 RNASEKQ6P5S7 137 aaKnown RBP7.1□□□□□ -1.27
TPM1-227ENST00000560970 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 FAM30AQ9NZY2 134 aa7.1□□□□□ -1.27
TPM1-227ENST00000560970 AMTP48728 403 aa7.09□□□□□ -1.27
TPM1-227ENST00000560970 TM2D2Q9BX73 214 aa7.09□□□□□ -1.27
TPM1-227ENST00000560970 IGHV1-24A0A0C4DH33 117 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 SMKR1H3BMG3 65 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 NCR2O95944 276 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 LINC00614P0C842 121 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 GAGE6Q13070 117 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 WFDC2Q14508 124 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 JOSD1Q15040 202 aaPredicted RBP7.08□□□□□ -1.28
TPM1-227ENST00000560970 TMEM97Q5BJF2 176 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 PYY3Q5JQD4 70 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 URB1-AS1Q96HZ7 61 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 CHCHD7Q9BUK0 85 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 MAP1LC3AQ9H492 121 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 KLK12Q9UKR0 248 aa7.08□□□□□ -1.28
TPM1-227ENST00000560970 TRBV25-1A0A075B6N4 114 aa7.07□□□□□ -1.28
TPM1-227ENST00000560970 A0A087WX48 190 aa7.07□□□□□ -1.28
TPM1-227ENST00000560970 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
TPM1-227ENST00000560970 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
TPM1-227ENST00000560970 NPYP01303 97 aa7.07□□□□□ -1.28
TPM1-227ENST00000560970 FA2HQ7L5A8 372 aa7.07□□□□□ -1.28
TPM1-227ENST00000560970 Q8N976 141 aa7.07□□□□□ -1.28
TPM1-227ENST00000560970 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.06□□□□□ -1.28
TPM1-227ENST00000560970 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 SDHAF1A6NFY7 115 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 PRSS47A8MTI9 375 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 TMEM262E9PQX1 116 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 PPP1R17O96001 155 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 RBX1P62877 108 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 COTL1Q14019 142 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 NRACQ8N912 160 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 PRSS3P2Q8NHM4 247 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 TMEM243Q9BU79 118 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 NXT2Q9NPJ8 142 aaKnown RBP7.06□□□□□ -1.28
TPM1-227ENST00000560970 AP5S1Q9NUS5 200 aa7.06□□□□□ -1.28
TPM1-227ENST00000560970 LINC01546A6NGU7 62 aa7.05□□□□□ -1.28
TPM1-227ENST00000560970 LECT2O14960 151 aa7.05□□□□□ -1.28
TPM1-227ENST00000560970 TNFRSF6BO95407 300 aa7.05□□□□□ -1.28
TPM1-227ENST00000560970 CLPSL2Q6UWE3 100 aa7.05□□□□□ -1.28
TPM1-227ENST00000560970 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
TPM1-227ENST00000560970 SCXQ7RTU7 201 aa7.05□□□□□ -1.28
TPM1-227ENST00000560970 UBE2WQ96B02 151 aa7.05□□□□□ -1.28
TPM1-227ENST00000560970 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
TPM1-227ENST00000560970 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 ANGP03950 147 aaKnown RBP7.04□□□□□ -1.28
TPM1-227ENST00000560970 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 FAM19A2Q8N3H0 131 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 C20orf203Q8NBC4 194 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 RMI2Q96E14 147 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 C20orf78Q9BR46 151 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 COX11Q9Y6N1 276 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 FAT3Q8TDW7 4589 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
TPM1-227ENST00000560970 HMCN2Q8NDA2 5059 aa7.03□□□□□ -1.28
TPM1-227ENST00000560970 IGKV2D-24A0A075B6R9 120 aa7.03□□□□□ -1.28
TPM1-227ENST00000560970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.03□□□□□ -1.28
TPM1-227ENST00000560970 IGKV2-29A2NJV5 120 aaPredicted RBP7.03□□□□□ -1.28
TPM1-227ENST00000560970 TSHBP01222 138 aa7.03□□□□□ -1.28
TPM1-227ENST00000560970 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
TPM1-227ENST00000560970 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
TPM1-227ENST00000560970 PKIAP61925 76 aa7.03□□□□□ -1.28
TPM1-227ENST00000560970 Q8N8P6 123 aa7.03□□□□□ -1.28
TPM1-227ENST00000560970 ST20Q9HBF5 79 aa7.03□□□□□ -1.28
TPM1-227ENST00000560970 HSPB8Q9UJY1 196 aa7.03□□□□□ -1.28
TPM1-227ENST00000560970 LOC389332A0A1B0GUA5 103 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 I3L3M4 83 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 K7EMI3 77 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 LEPROTL1O95214 131 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms