RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 H0Y9J4 135 aa11.21□□□□□ -0.61
TPM1-226ENST00000560959 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
TPM1-226ENST00000560959 TRBV6-5A0A0K0K1A5 114 aa11.2□□□□□ -0.62
TPM1-226ENST00000560959 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
TPM1-226ENST00000560959 BCL2P10415 239 aa11.2□□□□□ -0.62
TPM1-226ENST00000560959 PMCHP20382 165 aa11.2□□□□□ -0.62
TPM1-226ENST00000560959 MEF2BQ02080 365 aaPredicted RBP11.2□□□□□ -0.62
TPM1-226ENST00000560959 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
TPM1-226ENST00000560959 SMIM15Q7Z3B0 74 aa11.2□□□□□ -0.62
TPM1-226ENST00000560959 TSKUQ8WUA8 353 aa11.2□□□□□ -0.62
TPM1-226ENST00000560959 C2orf48Q96LS8 159 aa11.2□□□□□ -0.62
TPM1-226ENST00000560959 KRTAP9-6A0A140TA67 174 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 RAB19A4D1S5 217 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 MALP21145 153 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 ZNF345Q14585 488 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 PRR4Q16378 134 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 RNF151Q2KHN1 245 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 NUDT10Q8NFP7 164 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 NUDT11Q96G61 164 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 CAMK2N2Q96S95 79 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 FAT4Q6V0I7 4981 aa11.19□□□□□ -0.62
TPM1-226ENST00000560959 TRAV1-1A0A0B4J248 108 aa11.18□□□□□ -0.62
TPM1-226ENST00000560959 C1orf196B1AJZ1 125 aa11.18□□□□□ -0.62
TPM1-226ENST00000560959 LCE2AQ5TA79 106 aaPredicted RBP11.18□□□□□ -0.62
TPM1-226ENST00000560959 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
TPM1-226ENST00000560959 GNG13Q9P2W3 67 aa11.18□□□□□ -0.62
TPM1-226ENST00000560959 COX7A2LO14548 114 aa11.17□□□□□ -0.62
TPM1-226ENST00000560959 TRBV20OR9-2A0A075B6H5 130 aa11.16□□□□□ -0.62
TPM1-226ENST00000560959 PDE6DO43924 150 aa11.16□□□□□ -0.62
TPM1-226ENST00000560959 BCL2L11O43521 198 aa11.15□□□□□ -0.62
TPM1-226ENST00000560959 TSHBP01222 138 aa11.15□□□□□ -0.62
TPM1-226ENST00000560959 KRTAP1-4P0C5Y4 121 aa11.15□□□□□ -0.62
TPM1-226ENST00000560959 RPL13AP40429 203 aaKnown RBP11.15□□□□□ -0.62
TPM1-226ENST00000560959 RPL18AQ02543 176 aaKnown RBP11.15□□□□□ -0.62
TPM1-226ENST00000560959 A0A087WZ39 114 aa11.14□□□□□ -0.63
TPM1-226ENST00000560959 FOXA3P55318 350 aaPredicted RBP11.14□□□□□ -0.63
TPM1-226ENST00000560959 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
TPM1-226ENST00000560959 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
TPM1-226ENST00000560959 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
TPM1-226ENST00000560959 F8WDY8 70 aa11.12□□□□□ -0.63
TPM1-226ENST00000560959 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
TPM1-226ENST00000560959 MED9Q9NWA0 146 aa11.12□□□□□ -0.63
TPM1-226ENST00000560959 CARHSP1Q9Y2V2 147 aaKnown RBP11.12□□□□□ -0.63
TPM1-226ENST00000560959 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
TPM1-226ENST00000560959 C7orf77A4D0Y5 90 aa11.11□□□□□ -0.63
TPM1-226ENST00000560959 HMSDA8MTL9 139 aa11.11□□□□□ -0.63
TPM1-226ENST00000560959 TEX46H3BTG2 121 aa11.11□□□□□ -0.63
TPM1-226ENST00000560959 UBE2D1P51668 147 aa11.11□□□□□ -0.63
TPM1-226ENST00000560959 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
TPM1-226ENST00000560959 OPRPNQ99935 248 aaPredicted RBP11.11□□□□□ -0.63
TPM1-226ENST00000560959 TMEM242Q9NWH2 141 aa11.11□□□□□ -0.63
TPM1-226ENST00000560959 MRPL35Q9NZE8 188 aaKnown RBP11.11□□□□□ -0.63
TPM1-226ENST00000560959 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
TPM1-226ENST00000560959 KANTRA0A1W2PQU2 76 aa11.09□□□□□ -0.63
TPM1-226ENST00000560959 KRTAP11-1Q8IUC1 163 aa11.09□□□□□ -0.63
TPM1-226ENST00000560959 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
TPM1-226ENST00000560959 RNASE7Q9H1E1 156 aaKnown RBP11.09□□□□□ -0.63
TPM1-226ENST00000560959 TLX1NBP0CAT3 122 aa11.08□□□□□ -0.64
TPM1-226ENST00000560959 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
TPM1-226ENST00000560959 TMEM241Q24JQ0 296 aa11.07□□□□□ -0.64
TPM1-226ENST00000560959 C5orf38Q86SI9 138 aa11.07□□□□□ -0.64
TPM1-226ENST00000560959 SMLR1H3BR10 107 aa11.06□□□□□ -0.64
TPM1-226ENST00000560959 K7EN84 100 aa11.06□□□□□ -0.64
TPM1-226ENST00000560959 OCC1Q8TAD7 63 aa11.06□□□□□ -0.64
TPM1-226ENST00000560959 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
TPM1-226ENST00000560959 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
TPM1-226ENST00000560959 VCYO14598 125 aa11.05□□□□□ -0.64
TPM1-226ENST00000560959 FAM168BA1KXE4 195 aa11.04□□□□□ -0.64
TPM1-226ENST00000560959 A8MWL6 223 aa11.04□□□□□ -0.64
TPM1-226ENST00000560959 NDUFA1O15239 70 aa11.03□□□□□ -0.64
TPM1-226ENST00000560959 TAGLN2P37802 199 aaKnown RBP11.03□□□□□ -0.64
TPM1-226ENST00000560959 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
TPM1-226ENST00000560959 FCER1GP30273 86 aa11.02□□□□□ -0.65
TPM1-226ENST00000560959 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.65
TPM1-226ENST00000560959 GATCO43716 136 aaKnown RBP11.01□□□□□ -0.65
TPM1-226ENST00000560959 RAB4AP20338 218 aa11.01□□□□□ -0.65
TPM1-226ENST00000560959 FAM231DQ6ZW35 169 aa11.01□□□□□ -0.65
TPM1-226ENST00000560959 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
TPM1-226ENST00000560959 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
TPM1-226ENST00000560959 PPP1R17O96001 155 aa11□□□□□ -0.65
TPM1-226ENST00000560959 UBE2BP63146 152 aa11□□□□□ -0.65
TPM1-226ENST00000560959 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
TPM1-226ENST00000560959 CT83Q5H943 113 aa11□□□□□ -0.65
TPM1-226ENST00000560959 KRTAP7-1Q8IUC3 87 aa11□□□□□ -0.65
TPM1-226ENST00000560959 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
TPM1-226ENST00000560959 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
TPM1-226ENST00000560959 ORAOV1Q8WV07 137 aa10.99□□□□□ -0.65
TPM1-226ENST00000560959 TMEM18Q96B42 140 aa10.99□□□□□ -0.65
TPM1-226ENST00000560959 KIR2DL4Q99706 377 aa10.99□□□□□ -0.65
TPM1-226ENST00000560959 M0QXV9 152 aa10.98□□□□□ -0.65
TPM1-226ENST00000560959 ZNF861PO60384 105 aa10.98□□□□□ -0.65
TPM1-226ENST00000560959 C10orf25Q5T742 122 aa10.98□□□□□ -0.65
TPM1-226ENST00000560959 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
TPM1-226ENST00000560959 A0A1B0GUT8 65 aa10.97□□□□□ -0.65
TPM1-226ENST00000560959 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
TPM1-226ENST00000560959 UNQ6190/PRO20217Q6UXQ8 127 aa10.97□□□□□ -0.65
TPM1-226ENST00000560959 Q6ZUT4 128 aa10.97□□□□□ -0.65
TPM1-226ENST00000560959 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
TPM1-226ENST00000560959 TSPAN13O95857 204 aa10.96□□□□□ -0.65
TPM1-226ENST00000560959 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms