RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SMIM3Q9BZL3 60 aa3.59□□□□□ -1.83
HERC1-208ENST00000560462 TREM1Q9NP99 234 aa3.59□□□□□ -1.83
HERC1-208ENST00000560462 A6NDN8 102 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 F6UZH7 168 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 SMKR1H3BMG3 65 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 RPL12P30050 165 aaKnown RBP3.58□□□□□ -1.84
HERC1-208ENST00000560462 TAS2R45P59539 299 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 DEFA1P59665 94 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 DEFA3P59666 94 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 RAB2AP61019 212 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 ZNF266Q14584 549 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 HIGD2BQ4VC39 106 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 Q6AWC8 147 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 HYLS1Q96M11 299 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 NAGKQ9UJ70 344 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 LENEPQ9Y5L5 61 aa3.58□□□□□ -1.84
HERC1-208ENST00000560462 IGHV3-73A0A0B4J1V6 119 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 TMEM262E9PQX1 116 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 M0R2P5 195 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 GNG5P63218 68 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 ZNF726P1Q15940 193 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 FAM74A1Q5RGS3 127 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 GOLT1AQ6ZVE7 132 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 CMTM2Q8TAZ6 248 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 SCGB1C1Q8TD33 95 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 PKIGQ9Y2B9 76 aa3.57□□□□□ -1.84
HERC1-208ENST00000560462 TRAV21A0A0B4J279 112 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 HMGB3O15347 200 aaKnown RBP3.56□□□□□ -1.84
HERC1-208ENST00000560462 TYMSP04818 313 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 ARL14EPLP0DKL9 152 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 MGST1P10620 155 aaKnown RBP3.56□□□□□ -1.84
HERC1-208ENST00000560462 CDC34P49427 236 aaPredicted RBP3.56□□□□□ -1.84
HERC1-208ENST00000560462 CLPSL2Q6UWE3 100 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 FP248Q71RG6 208 aaPredicted RBP3.56□□□□□ -1.84
HERC1-208ENST00000560462 LINC00304Q8N9R0 145 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 TSKUQ8WUA8 353 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 WFDC1Q9HC57 220 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 OTORQ9NRC9 128 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 ALG5Q9Y673 324 aa3.56□□□□□ -1.84
HERC1-208ENST00000560462 RAB19A4D1S5 217 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 GNRH2O43555 120 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 RAB4AP20338 218 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 MPV17L2Q567V2 206 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 TVP23CQ96ET8 276 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 KCNS1Q96KK3 526 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 NDFIP1Q9BT67 221 aa3.55□□□□□ -1.84
HERC1-208ENST00000560462 GCGP01275 180 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 TCRAP04437 139 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 ATP6V0CP27449 155 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 ZNF80P51504 273 aaPredicted RBP3.54□□□□□ -1.84
HERC1-208ENST00000560462 KIAA0087Q14695 138 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 CFAP126Q5VTH2 177 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 C5orf17Q8NAS9 161 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 OR2G3Q8NGZ4 309 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 ASB13Q8WXK3 278 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 AQP10Q96PS8 301 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 PSMG3Q9BT73 122 aaPredicted RBP3.54□□□□□ -1.84
HERC1-208ENST00000560462 PRR34Q9NV39 138 aa3.54□□□□□ -1.84
HERC1-208ENST00000560462 A0A1W2PNN7 141 aa3.53□□□□□ -1.84
HERC1-208ENST00000560462 PTTG1O95997 202 aa3.53□□□□□ -1.84
HERC1-208ENST00000560462 GCHFRP30047 84 aa3.53□□□□□ -1.84
HERC1-208ENST00000560462 CTAG1AP78358 180 aa3.53□□□□□ -1.84
HERC1-208ENST00000560462 FLI1Q01543 452 aaPredicted RBP3.53□□□□□ -1.84
HERC1-208ENST00000560462 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
HERC1-208ENST00000560462 PHF5AQ7RTV0 110 aaKnown RBP3.53□□□□□ -1.84
HERC1-208ENST00000560462 CBLN2Q8IUK8 224 aa3.53□□□□□ -1.84
HERC1-208ENST00000560462 PSG8Q9UQ74 426 aa3.53□□□□□ -1.84
HERC1-208ENST00000560462 FXYD6-FXYD2A0A087WZ82 144 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 CXorf1O96002 111 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 GIPP09681 153 aaPredicted RBP3.52□□□□□ -1.85
HERC1-208ENST00000560462 RNASE3P12724 160 aaKnown RBP3.52□□□□□ -1.85
HERC1-208ENST00000560462 FGF8P55075 233 aaPredicted RBP3.52□□□□□ -1.85
HERC1-208ENST00000560462 SERF2P84101 59 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 SMUG1Q53HV7 270 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 PRNTQ86SH4 94 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 Q86TA4 180 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 LINC00269Q8N2A0 174 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 MED28Q9H204 178 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 TMEM167BQ9NRX6 74 aa3.52□□□□□ -1.85
HERC1-208ENST00000560462 CTXND1A0A1B0GTU2 59 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 GZMBP10144 247 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 RAB5AP20339 215 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 UBE2G2P60604 165 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 Q5BKY6 102 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 COA6Q5JTJ3 125 aaKnown RBP3.51□□□□□ -1.85
HERC1-208ENST00000560462 RPL7L1Q6DKI1 246 aaKnown RBP3.51□□□□□ -1.85
HERC1-208ENST00000560462 C15orf56Q8N910 161 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 BATF3Q9NR55 127 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 EPDR1Q9UM22 224 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 TNFSF18Q9UNG2 199 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 ARL2-SNX15V9GYD0 113 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 V9GYY9 64 aa3.51□□□□□ -1.85
HERC1-208ENST00000560462 BORCS7-ASMTA0A0B4J1R7 106 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 A0A1W2PRE2 83 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 H3BVH4 76 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 PEX7O00628 323 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms