RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FHL2Q14192 279 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 RHOHQ15669 191 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 ZFP2Q6ZN57 461 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 Q6ZN92 141 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 LINC00173Q6ZV60 143 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 CYSLTR1Q9Y271 337 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 TRGV4A0A0C4DH28 118 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 SDHAF1A6NFY7 115 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 M0QY20 66 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 LYPD5Q6UWN5 251 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 MIEN1Q9BRT3 115 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 UQCR10Q9UDW1 63 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
SMAD3-214ENST00000560402 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
SMAD3-214ENST00000560402 LINC00587B1AMM8 73 aa9.23□□□□□ -0.93
SMAD3-214ENST00000560402 RS1O15537 224 aa9.23□□□□□ -0.93
SMAD3-214ENST00000560402 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
SMAD3-214ENST00000560402 TOMM6Q96B49 74 aa9.23□□□□□ -0.93
SMAD3-214ENST00000560402 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
SMAD3-214ENST00000560402 TRAV4A0A0B4J268 109 aa9.22□□□□□ -0.93
SMAD3-214ENST00000560402 I3L3M4 83 aa9.22□□□□□ -0.93
SMAD3-214ENST00000560402 K7EQD1 137 aa9.22□□□□□ -0.93
SMAD3-214ENST00000560402 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
SMAD3-214ENST00000560402 CFAP126Q5VTH2 177 aa9.22□□□□□ -0.93
SMAD3-214ENST00000560402 OR4C5Q8NGB2 326 aa9.22□□□□□ -0.93
SMAD3-214ENST00000560402 DNAH10OSP0CZ25 163 aa9.21□□□□□ -0.94
SMAD3-214ENST00000560402 C2orf66Q6UXQ4 117 aa9.21□□□□□ -0.94
SMAD3-214ENST00000560402 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.94
SMAD3-214ENST00000560402 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
SMAD3-214ENST00000560402 C10orf126Q8N4M7 172 aa9.21□□□□□ -0.94
SMAD3-214ENST00000560402 ZNF479Q96JC4 524 aa9.21□□□□□ -0.94
SMAD3-214ENST00000560402 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
SMAD3-214ENST00000560402 DPM2O94777 84 aa9.2□□□□□ -0.94
SMAD3-214ENST00000560402 GYPEP15421 78 aa9.2□□□□□ -0.94
SMAD3-214ENST00000560402 PAPPA-AS1Q5QFB9 102 aa9.2□□□□□ -0.94
SMAD3-214ENST00000560402 ERASQ7Z444 233 aa9.2□□□□□ -0.94
SMAD3-214ENST00000560402 TMEM141Q96I45 108 aa9.2□□□□□ -0.94
SMAD3-214ENST00000560402 PMCHL2Q9BQD1 86 aa9.2□□□□□ -0.94
SMAD3-214ENST00000560402 A0A087WTM6 91 aa9.19□□□□□ -0.94
SMAD3-214ENST00000560402 TRAV12-1A0A0B4J245 112 aa9.19□□□□□ -0.94
SMAD3-214ENST00000560402 PLNP26678 52 aa9.19□□□□□ -0.94
SMAD3-214ENST00000560402 HNRNPA3P51991 378 aaKnown RBP9.19□□□□□ -0.94
SMAD3-214ENST00000560402 TIRAPP58753 221 aa9.19□□□□□ -0.94
SMAD3-214ENST00000560402 WFDC10BQ8IUB3 73 aa9.19□□□□□ -0.94
SMAD3-214ENST00000560402 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 IGHV3-73A0A0B4J1V6 119 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 TRBV10-1A0A0K0K1A3 114 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 IGKCP01834 107 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 IGLC3P0DOY3 106 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 SMAGPQ0VAQ4 97 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 UFSP1Q6NVU6 142 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
SMAD3-214ENST00000560402 A0A087WX48 190 aa9.17□□□□□ -0.94
SMAD3-214ENST00000560402 RPL36AP83881 106 aaKnown RBP9.17□□□□□ -0.94
SMAD3-214ENST00000560402 ODF1Q14990 250 aa9.17□□□□□ -0.94
SMAD3-214ENST00000560402 LBHQ53QV2 105 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-214ENST00000560402 RPL36ALQ969Q0 106 aaKnown RBP9.17□□□□□ -0.94
SMAD3-214ENST00000560402 hDV102S1A0JD36 115 aa9.16□□□□□ -0.94
SMAD3-214ENST00000560402 COTL1Q14019 142 aa9.16□□□□□ -0.94
SMAD3-214ENST00000560402 SLC25A34Q6PIV7 304 aa9.16□□□□□ -0.94
SMAD3-214ENST00000560402 F8VRH5 84 aa9.15□□□□□ -0.94
SMAD3-214ENST00000560402 M0R143 59 aa9.15□□□□□ -0.94
SMAD3-214ENST00000560402 NPSP0C0P6 89 aa9.15□□□□□ -0.94
SMAD3-214ENST00000560402 XGP55808 180 aa9.15□□□□□ -0.94
SMAD3-214ENST00000560402 CHTOPQ9Y3Y2 248 aaKnown RBP9.15□□□□□ -0.94
SMAD3-214ENST00000560402 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
SMAD3-214ENST00000560402 TSHBP01222 138 aa9.14□□□□□ -0.95
SMAD3-214ENST00000560402 LINC01556Q5JQF7 62 aa9.14□□□□□ -0.95
SMAD3-214ENST00000560402 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
SMAD3-214ENST00000560402 NTN5Q8WTR8 489 aaPredicted RBP9.14□□□□□ -0.95
SMAD3-214ENST00000560402 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
SMAD3-214ENST00000560402 HERC1Q15751 4861 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 PSCAO43653 123 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 GCSHP23434 173 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 PMVKQ15126 192 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 MAJINQ3KP22 176 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 Q5VSD8 79 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 DAZ4Q86SG3 579 aaKnown RBP9.13□□□□□ -0.95
SMAD3-214ENST00000560402 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 BAALCQ8WXS3 180 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 PRADC1Q9BSG0 188 aa9.13□□□□□ -0.95
SMAD3-214ENST00000560402 DAZ3Q9NR90 486 aaKnown RBP9.13□□□□□ -0.95
SMAD3-214ENST00000560402 TRAV8-6A0A0B4J262 113 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 TRBV6-4A0A1B0GX49 114 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 INAFM2P0DMQ5 153 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 COX8AP10176 69 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 FUSP35637 526 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMAD3-214ENST00000560402 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 HERVK_113P61574 105 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 TMEM97Q5BJF2 176 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 SPANXA1Q9NS26 97 aa9.12□□□□□ -0.95
SMAD3-214ENST00000560402 MRPL35Q9NZE8 188 aaKnown RBP9.12□□□□□ -0.95
SMAD3-214ENST00000560402 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-214ENST00000560402 FAT1Q14517 4588 aa9.11□□□□□ -0.95
SMAD3-214ENST00000560402 IGIPA6NJ69 53 aa9.11□□□□□ -0.95
SMAD3-214ENST00000560402 PYGO1Q9Y3Y4 419 aa9.11□□□□□ -0.95
SMAD3-214ENST00000560402 IGLV5-52A0A0A0MRZ9 124 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms