RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CKS2P33552 79 aa7.5□□□□□ -1.21
RABGGTA-216ENST00000560243 MRPL52Q86TS9 123 aaKnown RBP7.5□□□□□ -1.21
RABGGTA-216ENST00000560243 CLRN3Q8NCR9 226 aa7.5□□□□□ -1.21
RABGGTA-216ENST00000560243 BTF3L4Q96K17 158 aa7.5□□□□□ -1.21
RABGGTA-216ENST00000560243 TRBV24-1A0A075B6N3 115 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 LINC00862A6NCI5 91 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 D6R8Y8 96 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 TNFRSF6BO95407 300 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 PPP1R17O96001 155 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 NPYP01303 97 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 XCL1P47992 114 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 CNBPP62633 177 aaKnown RBP7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 FOXI1Q12951 378 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 SDIM1Q6ZPB5 146 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 CDC42SE2Q9NRR3 84 aa7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
RABGGTA-216ENST00000560243 F8W036 122 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 CCL25O15444 150 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 S100A8P05109 93 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 PNRC1Q12796 327 aaPredicted RBP7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 HIGD2BQ4VC39 106 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 RNASE13Q5GAN3 156 aaKnown RBP7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 C20orf78Q9BR46 151 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 HERC1Q15751 4861 aa7.48□□□□□ -1.21
RABGGTA-216ENST00000560243 MT-ND4LP03901 98 aa7.47□□□□□ -1.21
RABGGTA-216ENST00000560243 ADCYAP1P18509 176 aa7.47□□□□□ -1.21
RABGGTA-216ENST00000560243 KIR2DL4Q99706 377 aa7.47□□□□□ -1.21
RABGGTA-216ENST00000560243 SMIM2Q9BVW6 85 aa7.47□□□□□ -1.21
RABGGTA-216ENST00000560243 UBE2D4Q9Y2X8 147 aa7.47□□□□□ -1.21
RABGGTA-216ENST00000560243 RPL39P62891 51 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-216ENST00000560243 RPL32P62910 135 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-216ENST00000560243 Q6ZUT4 128 aa7.46□□□□□ -1.22
RABGGTA-216ENST00000560243 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
RABGGTA-216ENST00000560243 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.22
RABGGTA-216ENST00000560243 LINC00526Q96FQ7 95 aa7.46□□□□□ -1.22
RABGGTA-216ENST00000560243 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
RABGGTA-216ENST00000560243 TCAPO15273 167 aa7.45□□□□□ -1.22
RABGGTA-216ENST00000560243 CHTF8P0CG12 524 aa7.45□□□□□ -1.22
RABGGTA-216ENST00000560243 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
RABGGTA-216ENST00000560243 CFAP161Q6P656 301 aa7.45□□□□□ -1.22
RABGGTA-216ENST00000560243 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
RABGGTA-216ENST00000560243 PRELID3AQ96N28 172 aa7.45□□□□□ -1.22
RABGGTA-216ENST00000560243 CSDC2Q9Y534 153 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-216ENST00000560243 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 GVQW2A0A096LPI5 108 aaPredicted RBP7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 TMEM218A2RU14 115 aa7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 PPBPP02775 128 aa7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 SS18Q15532 418 aa7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 TMEM136Q6ZRR5 245 aa7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 ORMDL3Q8N138 153 aa7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 OPRPNQ99935 248 aaPredicted RBP7.44□□□□□ -1.22
RABGGTA-216ENST00000560243 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
RABGGTA-216ENST00000560243 TRAV13-1A0A0B4J241 112 aa7.43□□□□□ -1.22
RABGGTA-216ENST00000560243 PHOX2AO14813 284 aa7.43□□□□□ -1.22
RABGGTA-216ENST00000560243 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
RABGGTA-216ENST00000560243 TIMM21Q9BVV7 248 aa7.43□□□□□ -1.22
RABGGTA-216ENST00000560243 LOC389332A0A1B0GUA5 103 aa7.42□□□□□ -1.22
RABGGTA-216ENST00000560243 COX6A2Q02221 97 aa7.42□□□□□ -1.22
RABGGTA-216ENST00000560243 CIRBPQ14011 172 aaKnown RBP7.42□□□□□ -1.22
RABGGTA-216ENST00000560243 UQCC3Q6UW78 93 aa7.42□□□□□ -1.22
RABGGTA-216ENST00000560243 PRSS3P2Q8NHM4 247 aa7.42□□□□□ -1.22
RABGGTA-216ENST00000560243 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
RABGGTA-216ENST00000560243 IGHV1-58A0A0C4DH39 117 aa7.41□□□□□ -1.22
RABGGTA-216ENST00000560243 C1orf196B1AJZ1 125 aa7.41□□□□□ -1.22
RABGGTA-216ENST00000560243 SMAGPQ0VAQ4 97 aa7.41□□□□□ -1.22
RABGGTA-216ENST00000560243 COMMD7Q86VX2 200 aa7.41□□□□□ -1.22
RABGGTA-216ENST00000560243 TMEM18Q96B42 140 aa7.41□□□□□ -1.22
RABGGTA-216ENST00000560243 A0A087WYN8 130 aa7.4□□□□□ -1.22
RABGGTA-216ENST00000560243 C5orf38Q86SI9 138 aa7.4□□□□□ -1.22
RABGGTA-216ENST00000560243 SPACA4Q8TDM5 124 aa7.4□□□□□ -1.22
RABGGTA-216ENST00000560243 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
RABGGTA-216ENST00000560243 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
RABGGTA-216ENST00000560243 COX7A2LO14548 114 aa7.39□□□□□ -1.23
RABGGTA-216ENST00000560243 RAB5AP20339 215 aa7.39□□□□□ -1.23
RABGGTA-216ENST00000560243 DPH3Q96FX2 82 aa7.39□□□□□ -1.23
RABGGTA-216ENST00000560243 IMMP2LQ96T52 175 aa7.39□□□□□ -1.23
RABGGTA-216ENST00000560243 SPANXA1Q9NS26 97 aa7.39□□□□□ -1.23
RABGGTA-216ENST00000560243 A0A096LNI7 61 aa7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 HNRNPA3P51991 378 aaKnown RBP7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 MRPS36P82909 103 aaKnown RBP7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 SEC11CQ9BY50 192 aa7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 CTDSP1Q9GZU7 261 aa7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 MAP1LC3AQ9H492 121 aa7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 LAMTOR2Q9Y2Q5 125 aa7.38□□□□□ -1.23
RABGGTA-216ENST00000560243 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 ZNF561-AS1K7EIQ3 104 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 MALP21145 153 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 KIAA1644Q3SXP7 199 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 Q8N8P6 123 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 CARD19Q96LW7 228 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 PLAC8Q9NZF1 115 aa7.37□□□□□ -1.23
RABGGTA-216ENST00000560243 IGLV4-3A0A075B6K6 122 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms