RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 RPP21Q9H633 154 aaKnown RBP6.61□□□□□ -1.35
TRAF3-207ENST00000559734 PSORS1C2Q9UIG4 136 aa6.61□□□□□ -1.35
TRAF3-207ENST00000559734 PKIGQ9Y2B9 76 aa6.61□□□□□ -1.35
TRAF3-207ENST00000559734 TMEM250H0YL14 139 aa6.6□□□□□ -1.35
TRAF3-207ENST00000559734 MT-ND6P03923 174 aa6.6□□□□□ -1.35
TRAF3-207ENST00000559734 CARD19Q96LW7 228 aa6.6□□□□□ -1.35
TRAF3-207ENST00000559734 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
TRAF3-207ENST00000559734 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
TRAF3-207ENST00000559734 NIT2Q9NQR4 276 aa6.59□□□□□ -1.35
TRAF3-207ENST00000559734 COTL1Q14019 142 aa6.58□□□□□ -1.36
TRAF3-207ENST00000559734 TWIST1Q15672 202 aa6.58□□□□□ -1.36
TRAF3-207ENST00000559734 AMMECR1LQ6DCA0 310 aa6.58□□□□□ -1.36
TRAF3-207ENST00000559734 PGLYRP4Q96LB8 373 aa6.58□□□□□ -1.36
TRAF3-207ENST00000559734 XCL1P47992 114 aa6.57□□□□□ -1.36
TRAF3-207ENST00000559734 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
TRAF3-207ENST00000559734 FAM231DQ6ZW35 169 aa6.57□□□□□ -1.36
TRAF3-207ENST00000559734 GATD1Q8NB37 220 aa6.57□□□□□ -1.36
TRAF3-207ENST00000559734 MUC2Q02817 5179 aa6.57□□□□□ -1.36
TRAF3-207ENST00000559734 GATCO43716 136 aaKnown RBP6.56□□□□□ -1.36
TRAF3-207ENST00000559734 CEBPGP53567 150 aa6.56□□□□□ -1.36
TRAF3-207ENST00000559734 PTTG1IPP53801 180 aa6.56□□□□□ -1.36
TRAF3-207ENST00000559734 FOXI1Q12951 378 aa6.56□□□□□ -1.36
TRAF3-207ENST00000559734 IGHV1-58A0A0C4DH39 117 aa6.55□□□□□ -1.36
TRAF3-207ENST00000559734 A0A1W2PNN7 141 aa6.55□□□□□ -1.36
TRAF3-207ENST00000559734 A8MWL6 223 aa6.55□□□□□ -1.36
TRAF3-207ENST00000559734 FOXA3P55318 350 aaPredicted RBP6.55□□□□□ -1.36
TRAF3-207ENST00000559734 SYCNQ0VAF6 134 aa6.55□□□□□ -1.36
TRAF3-207ENST00000559734 CT83Q5H943 113 aa6.55□□□□□ -1.36
TRAF3-207ENST00000559734 DIRC1Q969H9 104 aa6.55□□□□□ -1.36
TRAF3-207ENST00000559734 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
TRAF3-207ENST00000559734 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.54□□□□□ -1.36
TRAF3-207ENST00000559734 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 A0A1B0GVG6 124 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 IGKV2-29A2NJV5 120 aaPredicted RBP6.54□□□□□ -1.36
TRAF3-207ENST00000559734 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 UBE2D1P51668 147 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 PHF5AQ7RTV0 110 aaKnown RBP6.54□□□□□ -1.36
TRAF3-207ENST00000559734 SMIM15Q7Z3B0 74 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 LINC01551Q86U37 167 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 RPL39LQ96EH5 51 aaKnown RBP6.54□□□□□ -1.36
TRAF3-207ENST00000559734 FAM210AQ96ND0 272 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 SMIM7Q9BQ49 75 aa6.54□□□□□ -1.36
TRAF3-207ENST00000559734 ZNF727A8MUV8 499 aa6.53□□□□□ -1.36
TRAF3-207ENST00000559734 CCL25O15444 150 aa6.53□□□□□ -1.36
TRAF3-207ENST00000559734 SRP19P09132 144 aaKnown RBP6.53□□□□□ -1.36
TRAF3-207ENST00000559734 C9orf116Q5BN46 136 aaPredicted RBP6.53□□□□□ -1.36
TRAF3-207ENST00000559734 NCR2O95944 276 aa6.52□□□□□ -1.37
TRAF3-207ENST00000559734 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
TRAF3-207ENST00000559734 CAMPP49913 170 aa6.52□□□□□ -1.37
TRAF3-207ENST00000559734 RPL18AQ02543 176 aaKnown RBP6.52□□□□□ -1.37
TRAF3-207ENST00000559734 TEX261Q6UWH6 196 aa6.52□□□□□ -1.37
TRAF3-207ENST00000559734 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
TRAF3-207ENST00000559734 BORCS7Q96B45 105 aa6.52□□□□□ -1.37
TRAF3-207ENST00000559734 IGLV1-50A0A075B6I6 118 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 A0A1B0GUT8 65 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 SDHAF1A6NFY7 115 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 HIGD1CA8MV81 97 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 H0Y9J4 135 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 APCSP02743 223 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 FGF6P10767 208 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 OR5A1Q8NGJ0 315 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 ISOC2Q96AB3 205 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 OSTCQ9NRP0 149 aa6.51□□□□□ -1.37
TRAF3-207ENST00000559734 IGLV4-69A0A075B6H9 119 aa6.5□□□□□ -1.37
TRAF3-207ENST00000559734 A0A087WZ39 114 aa6.5□□□□□ -1.37
TRAF3-207ENST00000559734 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
TRAF3-207ENST00000559734 H7C423 109 aa6.5□□□□□ -1.37
TRAF3-207ENST00000559734 BTF3L4Q96K17 158 aa6.5□□□□□ -1.37
TRAF3-207ENST00000559734 I3L3M4 83 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 TSPAN13O95857 204 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 PMCHP20382 165 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 TMEM191AQ9H0A3 160 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 V9GYV3 84 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
TRAF3-207ENST00000559734 C9JQL5 133 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 APOMO95445 188 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 TSHBP01222 138 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 RAB4AP20338 218 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 MALP21145 153 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 RPL23P62829 140 aaKnown RBP6.48□□□□□ -1.37
TRAF3-207ENST00000559734 SS18Q15532 418 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 TMEM241Q24JQ0 296 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 FAM74A3Q4VXF1 159 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 AMN1Q8IY45 258 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 MRAP2Q96G30 205 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 CDIP1Q9H305 208 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 ST20Q9HBF5 79 aa6.48□□□□□ -1.37
TRAF3-207ENST00000559734 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
TRAF3-207ENST00000559734 ESDP10768 282 aa6.47□□□□□ -1.37
TRAF3-207ENST00000559734 ZNF25P17030 456 aaPredicted RBP6.47□□□□□ -1.37
TRAF3-207ENST00000559734 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
TRAF3-207ENST00000559734 RIGQ13278 110 aa6.47□□□□□ -1.37
TRAF3-207ENST00000559734 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
TRAF3-207ENST00000559734 TMEM242Q9NWH2 141 aa6.47□□□□□ -1.37
TRAF3-207ENST00000559734 TRBV27A0A0K0K1C4 114 aa6.46□□□□□ -1.38
TRAF3-207ENST00000559734 KRTAP1-4P0C5Y4 121 aa6.46□□□□□ -1.38
TRAF3-207ENST00000559734 RPL13AP40429 203 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms