RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 hDV102S1A0JD36 115 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 F5H697 171 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 H7C1H1 209 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 SMIM15Q7Z3B0 74 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 LINC01600Q96MT4 127 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 IMMP2LQ96T52 175 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 CTDSP1Q9GZU7 261 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 TMEM191AQ9H0A3 160 aa6.96□□□□□ -1.3
HERC1-204ENST00000559715 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 IGHV1-24A0A0C4DH33 117 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 A0A1B0GXF2 115 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 PHOX2AO14813 284 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 RHEBQ15382 184 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 SUMO4Q6EEV6 95 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 ATP5L2Q7Z4Y8 100 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 GATD1Q8NB37 220 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 TMEM242Q9NWH2 141 aa6.95□□□□□ -1.3
HERC1-204ENST00000559715 S100A8P05109 93 aa6.94□□□□□ -1.3
HERC1-204ENST00000559715 MGPP08493 103 aa6.94□□□□□ -1.3
HERC1-204ENST00000559715 HBBP68871 147 aa6.94□□□□□ -1.3
HERC1-204ENST00000559715 TRAV9-1A0A075B6T8 112 aa6.93□□□□□ -1.3
HERC1-204ENST00000559715 COX6A2Q02221 97 aa6.93□□□□□ -1.3
HERC1-204ENST00000559715 NDUFA5Q16718 116 aa6.93□□□□□ -1.3
HERC1-204ENST00000559715 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
HERC1-204ENST00000559715 PRSS3P2Q8NHM4 247 aa6.93□□□□□ -1.3
HERC1-204ENST00000559715 SVBPQ8N300 66 aa6.92□□□□□ -1.3
HERC1-204ENST00000559715 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.92□□□□□ -1.3
HERC1-204ENST00000559715 MRAP2Q96G30 205 aa6.92□□□□□ -1.3
HERC1-204ENST00000559715 BTF3L4Q96K17 158 aa6.92□□□□□ -1.3
HERC1-204ENST00000559715 TMEM243Q9BU79 118 aa6.92□□□□□ -1.3
HERC1-204ENST00000559715 NIT2Q9NQR4 276 aa6.92□□□□□ -1.3
HERC1-204ENST00000559715 TRBV6-5A0A0K0K1A5 114 aa6.91□□□□□ -1.3
HERC1-204ENST00000559715 C7orf77A4D0Y5 90 aa6.91□□□□□ -1.3
HERC1-204ENST00000559715 RAB4AP20338 218 aa6.91□□□□□ -1.3
HERC1-204ENST00000559715 PRR3P79522 188 aaKnown RBP6.91□□□□□ -1.3
HERC1-204ENST00000559715 SRSF9Q13242 221 aaKnown RBP eCLIP6.91□□□□□ -1.3
HERC1-204ENST00000559715 FAM104BQ5XKR9 115 aa6.91□□□□□ -1.3
HERC1-204ENST00000559715 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
HERC1-204ENST00000559715 AMN1Q8IY45 258 aa6.91□□□□□ -1.3
HERC1-204ENST00000559715 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.9□□□□□ -1.3
HERC1-204ENST00000559715 TRAV26-2A0A0B4J265 109 aa6.9□□□□□ -1.3
HERC1-204ENST00000559715 A0A0J9YXV3 536 aa6.9□□□□□ -1.3
HERC1-204ENST00000559715 SNAPINO95295 136 aa6.9□□□□□ -1.3
HERC1-204ENST00000559715 MUC2Q02817 5179 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 A0A096LNI7 61 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 PPP1R17O96001 155 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 APOC3P02656 99 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 RPS10P46783 165 aaKnown RBP6.89□□□□□ -1.31
HERC1-204ENST00000559715 CAMPP49913 170 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 DPH3Q96FX2 82 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 AP5S1Q9NUS5 200 aa6.89□□□□□ -1.31
HERC1-204ENST00000559715 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
HERC1-204ENST00000559715 PPBPP02775 128 aa6.88□□□□□ -1.31
HERC1-204ENST00000559715 S100PP25815 95 aa6.88□□□□□ -1.31
HERC1-204ENST00000559715 MRPL51Q4U2R6 128 aaKnown RBP6.88□□□□□ -1.31
HERC1-204ENST00000559715 HIGD2BQ4VC39 106 aa6.88□□□□□ -1.31
HERC1-204ENST00000559715 RPL39LQ96EH5 51 aaKnown RBP6.88□□□□□ -1.31
HERC1-204ENST00000559715 RPS10P5Q9NQ39 176 aa6.88□□□□□ -1.31
HERC1-204ENST00000559715 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
HERC1-204ENST00000559715 RPL32P62910 135 aaKnown RBP6.87□□□□□ -1.31
HERC1-204ENST00000559715 FOXI1Q12951 378 aa6.87□□□□□ -1.31
HERC1-204ENST00000559715 MAJINQ3KP22 176 aa6.87□□□□□ -1.31
HERC1-204ENST00000559715 SLC7A5P1Q8MH63 180 aa6.87□□□□□ -1.31
HERC1-204ENST00000559715 STPG4Q8N801 248 aa6.87□□□□□ -1.31
HERC1-204ENST00000559715 NRACQ8N912 160 aa6.87□□□□□ -1.31
HERC1-204ENST00000559715 CHCHD10Q8WYQ3 142 aaPredicted RBP6.87□□□□□ -1.31
HERC1-204ENST00000559715 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
HERC1-204ENST00000559715 SDHAF1A6NFY7 115 aa6.86□□□□□ -1.31
HERC1-204ENST00000559715 GAS8-AS1O95177 125 aa6.86□□□□□ -1.31
HERC1-204ENST00000559715 NCR2O95944 276 aa6.86□□□□□ -1.31
HERC1-204ENST00000559715 AMTP48728 403 aa6.86□□□□□ -1.31
HERC1-204ENST00000559715 COX19Q49B96 90 aa6.86□□□□□ -1.31
HERC1-204ENST00000559715 C7orf33Q8WU49 177 aa6.86□□□□□ -1.31
HERC1-204ENST00000559715 TRBV27A0A0K0K1C4 114 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 POLR2KP53803 58 aaKnown RBP6.85□□□□□ -1.31
HERC1-204ENST00000559715 SUMO2P61956 95 aaKnown RBP6.85□□□□□ -1.31
HERC1-204ENST00000559715 COTL1Q14019 142 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 TMEM136Q6ZRR5 245 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 ORMDL3Q8N138 153 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 C20orf78Q9BR46 151 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 ST20Q9HBF5 79 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 LAMTOR2Q9Y2Q5 125 aa6.85□□□□□ -1.31
HERC1-204ENST00000559715 IGKV3OR2-268A0A0C4DH90 116 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 D6R8Y8 96 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 SMKR1H3BMG3 65 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 I3L3M4 83 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 CKS2P33552 79 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 CFAP161Q6P656 301 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 SPINK6Q6UWN8 80 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 GNB1LQ9BYB4 327 aa6.84□□□□□ -1.31
HERC1-204ENST00000559715 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.83□□□□□ -1.32
HERC1-204ENST00000559715 IGKV2-29A2NJV5 120 aaPredicted RBP6.83□□□□□ -1.32
HERC1-204ENST00000559715 PRSS47A8MTI9 375 aa6.83□□□□□ -1.32
HERC1-204ENST00000559715 UBE2L6O14933 153 aa6.83□□□□□ -1.32
HERC1-204ENST00000559715 TNFRSF6BO95407 300 aa6.83□□□□□ -1.32
HERC1-204ENST00000559715 MT-ND6P03923 174 aa6.83□□□□□ -1.32
HERC1-204ENST00000559715 FGF6P10767 208 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms