RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 UBE2D4Q9Y2X8 147 aa12.8□□□□□ -0.36
SHF-205ENST00000559566 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.79□□□□□ -0.36
SHF-205ENST00000559566 TGIF2-C20orf24A0A0A6YYL0 155 aa12.79□□□□□ -0.36
SHF-205ENST00000559566 SNAPINO95295 136 aa12.79□□□□□ -0.36
SHF-205ENST00000559566 RPL39P62891 51 aaKnown RBP12.79□□□□□ -0.36
SHF-205ENST00000559566 NDUFA5Q16718 116 aa12.79□□□□□ -0.36
SHF-205ENST00000559566 CDPF1Q6NVV7 123 aa12.79□□□□□ -0.36
SHF-205ENST00000559566 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
SHF-205ENST00000559566 LAMTOR2Q9Y2Q5 125 aa12.79□□□□□ -0.36
SHF-205ENST00000559566 HSPG2P98160 4391 aa12.79□□□□□ -0.36
SHF-205ENST00000559566 IGLV5-52A0A0A0MRZ9 124 aa12.78□□□□□ -0.36
SHF-205ENST00000559566 OR5A1Q8NGJ0 315 aa12.78□□□□□ -0.36
SHF-205ENST00000559566 FAM104AQ969W3 186 aa12.78□□□□□ -0.36
SHF-205ENST00000559566 GNB1LQ9BYB4 327 aa12.78□□□□□ -0.36
SHF-205ENST00000559566 DNAH8Q96JB1 4490 aa12.77□□□□□ -0.36
SHF-205ENST00000559566 TRAV8-4A0A0B4J246 113 aa12.77□□□□□ -0.37
SHF-205ENST00000559566 USP17L23D6RBM5 183 aa12.77□□□□□ -0.37
SHF-205ENST00000559566 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
SHF-205ENST00000559566 TMEM101Q96IK0 257 aa12.77□□□□□ -0.37
SHF-205ENST00000559566 MAP1LC3AQ9H492 121 aa12.77□□□□□ -0.37
SHF-205ENST00000559566 Q6ZUT4 128 aa12.76□□□□□ -0.37
SHF-205ENST00000559566 ZNF664Q8N3J9 261 aa12.76□□□□□ -0.37
SHF-205ENST00000559566 NTN5Q8WTR8 489 aaPredicted RBP12.76□□□□□ -0.37
SHF-205ENST00000559566 KRTAP17-1Q9BYP8 105 aa12.76□□□□□ -0.37
SHF-205ENST00000559566 GAGE12HA6NDE8 117 aa12.75□□□□□ -0.37
SHF-205ENST00000559566 Q8N8P6 123 aa12.75□□□□□ -0.37
SHF-205ENST00000559566 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
SHF-205ENST00000559566 YPEL4Q96NS1 127 aa12.75□□□□□ -0.37
SHF-205ENST00000559566 LINC00959A0A1B0GUT2 108 aa12.74□□□□□ -0.37
SHF-205ENST00000559566 GCSHP23434 173 aa12.74□□□□□ -0.37
SHF-205ENST00000559566 OPRPNQ99935 248 aaPredicted RBP12.74□□□□□ -0.37
SHF-205ENST00000559566 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
SHF-205ENST00000559566 PRSS1P07477 247 aa12.73□□□□□ -0.37
SHF-205ENST00000559566 LINC01620Q4KN68 170 aa12.73□□□□□ -0.37
SHF-205ENST00000559566 TIMM21Q9BVV7 248 aa12.73□□□□□ -0.37
SHF-205ENST00000559566 MRPL18Q9H0U6 180 aaKnown RBP12.73□□□□□ -0.37
SHF-205ENST00000559566 IFI27P40305 119 aaPredicted RBP12.72□□□□□ -0.37
SHF-205ENST00000559566 DGAT2L7PQ6IED9 249 aa12.72□□□□□ -0.37
SHF-205ENST00000559566 ALKBH7Q9BT30 221 aaPredicted RBP12.72□□□□□ -0.37
SHF-205ENST00000559566 RAB5AP20339 215 aa12.71□□□□□ -0.37
SHF-205ENST00000559566 FOXI1Q12951 378 aa12.71□□□□□ -0.37
SHF-205ENST00000559566 TMEM18Q96B42 140 aa12.71□□□□□ -0.37
SHF-205ENST00000559566 CCL25O15444 150 aa12.7□□□□□ -0.38
SHF-205ENST00000559566 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
SHF-205ENST00000559566 XCL1P47992 114 aa12.7□□□□□ -0.38
SHF-205ENST00000559566 FABP9Q0Z7S8 132 aa12.7□□□□□ -0.38
SHF-205ENST00000559566 COX19Q49B96 90 aa12.7□□□□□ -0.38
SHF-205ENST00000559566 C15orf56Q8N910 161 aa12.7□□□□□ -0.38
SHF-205ENST00000559566 MT-ND6P03923 174 aa12.69□□□□□ -0.38
SHF-205ENST00000559566 CBLN2Q8IUK8 224 aa12.69□□□□□ -0.38
SHF-205ENST00000559566 SPANXA1Q9NS26 97 aa12.68□□□□□ -0.38
SHF-205ENST00000559566 FAM30AQ9NZY2 134 aa12.68□□□□□ -0.38
SHF-205ENST00000559566 XGP55808 180 aa12.67□□□□□ -0.38
SHF-205ENST00000559566 HAMPP81172 84 aa12.67□□□□□ -0.38
SHF-205ENST00000559566 SMAGPQ0VAQ4 97 aa12.67□□□□□ -0.38
SHF-205ENST00000559566 C14orf177Q52M58 125 aa12.67□□□□□ -0.38
SHF-205ENST00000559566 NXT2Q9NPJ8 142 aaKnown RBP12.67□□□□□ -0.38
SHF-205ENST00000559566 TRAV13-1A0A0B4J241 112 aa12.66□□□□□ -0.38
SHF-205ENST00000559566 SLPIP03973 132 aa12.66□□□□□ -0.38
SHF-205ENST00000559566 MRPS36P82909 103 aaKnown RBP12.66□□□□□ -0.38
SHF-205ENST00000559566 C2orf66Q6UXQ4 117 aa12.66□□□□□ -0.38
SHF-205ENST00000559566 TRAPPC1Q9Y5R8 145 aa12.66□□□□□ -0.38
SHF-205ENST00000559566 IGLV4-3A0A075B6K6 122 aa12.65□□□□□ -0.38
SHF-205ENST00000559566 SS18Q15532 418 aa12.65□□□□□ -0.38
SHF-205ENST00000559566 HIGD2BQ4VC39 106 aa12.64□□□□□ -0.39
SHF-205ENST00000559566 ORMDL2Q53FV1 153 aa12.64□□□□□ -0.39
SHF-205ENST00000559566 ZC2HC1BQ5TFG8 222 aa12.64□□□□□ -0.39
SHF-205ENST00000559566 CYSLTR1Q9Y271 337 aa12.64□□□□□ -0.39
SHF-205ENST00000559566 PYGO1Q9Y3Y4 419 aa12.64□□□□□ -0.39
SHF-205ENST00000559566 hDV102S1A0JD36 115 aa12.63□□□□□ -0.39
SHF-205ENST00000559566 CD164L2Q6UWJ8 174 aa12.63□□□□□ -0.39
SHF-205ENST00000559566 LINC01546A6NGU7 62 aa12.62□□□□□ -0.39
SHF-205ENST00000559566 K7EMI3 77 aa12.62□□□□□ -0.39
SHF-205ENST00000559566 PRSS3P2Q8NHM4 247 aa12.62□□□□□ -0.39
SHF-205ENST00000559566 URB1-AS1Q96HZ7 61 aa12.62□□□□□ -0.39
SHF-205ENST00000559566 SMCO4Q9NRQ5 59 aa12.62□□□□□ -0.39
SHF-205ENST00000559566 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
SHF-205ENST00000559566 C1orf196B1AJZ1 125 aa12.61□□□□□ -0.39
SHF-205ENST00000559566 Q6ZSA8 131 aa12.61□□□□□ -0.39
SHF-205ENST00000559566 LINC00173Q6ZV60 143 aa12.61□□□□□ -0.39
SHF-205ENST00000559566 KRTAP4-5Q9BYR2 181 aa12.61□□□□□ -0.39
SHF-205ENST00000559566 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
SHF-205ENST00000559566 C18orf32Q8TCD1 76 aa12.6□□□□□ -0.39
SHF-205ENST00000559566 LINC00526Q96FQ7 95 aa12.6□□□□□ -0.39
SHF-205ENST00000559566 GVQW2A0A096LPI5 108 aaPredicted RBP12.59□□□□□ -0.39
SHF-205ENST00000559566 CNBPP62633 177 aaKnown RBP12.59□□□□□ -0.39
SHF-205ENST00000559566 TOMM6Q96B49 74 aa12.59□□□□□ -0.39
SHF-205ENST00000559566 TMEM141Q96I45 108 aa12.59□□□□□ -0.39
SHF-205ENST00000559566 ABCA13Q86UQ4 5058 aa12.59□□□□□ -0.39
SHF-205ENST00000559566 FAT1Q14517 4588 aa12.58□□□□□ -0.4
SHF-205ENST00000559566 CFAP161Q6P656 301 aa12.58□□□□□ -0.4
SHF-205ENST00000559566 C5orf38Q86SI9 138 aa12.58□□□□□ -0.4
SHF-205ENST00000559566 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
SHF-205ENST00000559566 AMELXQ99217 191 aa12.57□□□□□ -0.4
SHF-205ENST00000559566 IGHV1-58A0A0C4DH39 117 aa12.56□□□□□ -0.4
SHF-205ENST00000559566 COX7A2LO14548 114 aa12.56□□□□□ -0.4
SHF-205ENST00000559566 COX6A2Q02221 97 aa12.56□□□□□ -0.4
SHF-205ENST00000559566 FA2HQ7L5A8 372 aa12.56□□□□□ -0.4
SHF-205ENST00000559566 A0A096LNJ9 63 aa12.55□□□□□ -0.4
SHF-205ENST00000559566 IGHV3OR16-9A0A0B4J2B5 98 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms