RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 CMYA5Q8N3K9 4069 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 CDK5RAP2Q96SN8 1893 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 SPG11Q96JI7 2443 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 DAPK1P53355 1430 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 NEFHP12036 1026 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 CBLN1P23435 193 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 CCL18P55774 89 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 S100A7L2Q5SY68 101 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 TP53AIP1Q9HCN2 124 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 LRP6O75581 1613 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 DNAH1Q9P2D7 4330 aa-1.11□□□□□ -2.59
CASC4-210ENST00000559550 PLXNB2O15031 1838 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 I3L2K1 104 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 K7EQZ3 153 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 PIPP12273 146 aaPredicted RBP-1.12□□□□□ -2.59
CASC4-210ENST00000559550 TAC4Q86UU9 113 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 PSMG3Q9BT73 122 aaPredicted RBP-1.12□□□□□ -2.59
CASC4-210ENST00000559550 SMIM3Q9BZL3 60 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 AGPAT4-IT1Q9H0P7 198 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 MRPL40Q9NQ50 206 aaKnown RBP-1.12□□□□□ -2.59
CASC4-210ENST00000559550 LRRK2Q5S007 2527 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 LRRC37A3O60309 1634 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 TMEM2Q9UHN6 1383 aa-1.12□□□□□ -2.59
CASC4-210ENST00000559550 DISP2A7MBM2 1401 aa-1.13□□□□□ -2.59
CASC4-210ENST00000559550 NBEAQ8NFP9 2946 aa-1.13□□□□□ -2.59
CASC4-210ENST00000559550 GCN1Q92616 2671 aaKnown RBP-1.13□□□□□ -2.59
CASC4-210ENST00000559550 FXYD6-FXYD2A0A087WZ82 144 aa-1.13□□□□□ -2.59
CASC4-210ENST00000559550 TSPAN19P0C672 248 aa-1.13□□□□□ -2.59
CASC4-210ENST00000559550 DNAH5Q8TE73 4624 aa-1.13□□□□□ -2.59
CASC4-210ENST00000559550 WNK3Q9BYP7 1800 aa-1.13□□□□□ -2.59
CASC4-210ENST00000559550 KDM3BQ7LBC6 1761 aa-1.13□□□□□ -2.59
CASC4-210ENST00000559550 CASKIN1Q8WXD9 1431 aa-1.14□□□□□ -2.59
CASC4-210ENST00000559550 SPRR2AP35326 72 aa-1.14□□□□□ -2.59
CASC4-210ENST00000559550 RRAS2P62070 204 aaPredicted RBP-1.14□□□□□ -2.59
CASC4-210ENST00000559550 CTAGE3PQ8IX95 158 aa-1.14□□□□□ -2.59
CASC4-210ENST00000559550 SPTSSAQ969W0 71 aa-1.14□□□□□ -2.59
CASC4-210ENST00000559550 CCDC168Q8NDH2 2452 aa-1.14□□□□□ -2.59
CASC4-210ENST00000559550 PRG4Q92954 1404 aaPredicted RBP-1.15□□□□□ -2.59
CASC4-210ENST00000559550 CEP295Q9C0D2 2601 aa-1.15□□□□□ -2.59
CASC4-210ENST00000559550 ERCC6L2Q5T890 1561 aa-1.15□□□□□ -2.59
CASC4-210ENST00000559550 CCL8P80075 99 aa-1.15□□□□□ -2.59
CASC4-210ENST00000559550 SPAG11AQ6PDA7 123 aa-1.15□□□□□ -2.59
CASC4-210ENST00000559550 ACACAQ13085 2346 aa-1.15□□□□□ -2.59
CASC4-210ENST00000559550 UTP20O75691 2785 aaKnown RBP-1.15□□□□□ -2.59
CASC4-210ENST00000559550 MYO7BQ6PIF6 2116 aa-1.16□□□□□ -2.59
CASC4-210ENST00000559550 M0R135 149 aa-1.16□□□□□ -2.6
CASC4-210ENST00000559550 SNCGO76070 127 aa-1.16□□□□□ -2.6
CASC4-210ENST00000559550 PPP1R17O96001 155 aa-1.16□□□□□ -2.6
CASC4-210ENST00000559550 DCDP81605 110 aaKnown RBP-1.16□□□□□ -2.6
CASC4-210ENST00000559550 MYH6P13533 1939 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 MRC1P22897 1456 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 KALRNO60229 2985 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 NDUFB6O95139 128 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 NCR2O95944 276 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 SCGB1A1P11684 91 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 SEC11CQ9BY50 192 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 R4GMQ9 66 aa-1.17□□□□□ -2.6
CASC4-210ENST00000559550 TRBV6-1A0A0K0K1D8 114 aa-1.18□□□□□ -2.6
CASC4-210ENST00000559550 J3QR89 54 aa-1.18□□□□□ -2.6
CASC4-210ENST00000559550 S100A3P33764 101 aa-1.18□□□□□ -2.6
CASC4-210ENST00000559550 CKS1BP61024 79 aa-1.18□□□□□ -2.6
CASC4-210ENST00000559550 ITPR2Q14571 2701 aa-1.18□□□□□ -2.6
CASC4-210ENST00000559550 PKD1L2Q7Z442 2459 aa-1.18□□□□□ -2.6
CASC4-210ENST00000559550 CFAP46Q8IYW2 2715 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 CTXND1A0A1B0GTU2 59 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 M0R2Z0 102 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 SIX6O95475 246 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 B2MP61769 119 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 SCIMPQ6UWF3 145 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 SMIM4Q8WVI0 70 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 SPRR2FQ96RM1 72 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 LYSTQ99698 3801 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 DNAH7Q8WXX0 4024 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 CHD7Q9P2D1 2997 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 PXDNQ92626 1479 aa-1.19□□□□□ -2.6
CASC4-210ENST00000559550 DNAH17Q9UFH2 4485 aa-1.2□□□□□ -2.6
CASC4-210ENST00000559550 EYSQ5T1H1 3165 aa-1.2□□□□□ -2.6
CASC4-210ENST00000559550 PRDM2Q13029 1718 aa-1.2□□□□□ -2.6
CASC4-210ENST00000559550 LOC730098B7Z3J9 87 aa-1.2□□□□□ -2.6
CASC4-210ENST00000559550 K7ERU9 68 aa-1.2□□□□□ -2.6
CASC4-210ENST00000559550 ALX1Q15699 326 aa-1.2□□□□□ -2.6
CASC4-210ENST00000559550 IFT140Q96RY7 1462 aa-1.2□□□□□ -2.6
CASC4-210ENST00000559550 ZNF236Q9UL36 1845 aa-1.21□□□□□ -2.6
CASC4-210ENST00000559550 GOLGA4Q13439 2230 aaKnown RBP-1.21□□□□□ -2.6
CASC4-210ENST00000559550 HCG22E2RYF7 251 aa-1.21□□□□□ -2.6
CASC4-210ENST00000559550 SPRR1BP22528 89 aa-1.21□□□□□ -2.6
CASC4-210ENST00000559550 PIGYQ3MUY2 71 aa-1.21□□□□□ -2.6
CASC4-210ENST00000559550 GSKIPQ9P0R6 139 aa-1.21□□□□□ -2.6
CASC4-210ENST00000559550 SPAARA0A1B0GVQ0 90 aa-1.22□□□□□ -2.6
CASC4-210ENST00000559550 DMXL1Q9Y485 3027 aa-1.22□□□□□ -2.61
CASC4-210ENST00000559550 PAPPAQ13219 1627 aa-1.22□□□□□ -2.61
CASC4-210ENST00000559550 ACACBO00763 2458 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 LRRC37A2A6NM11 1700 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 ARPC5O15511 151 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 C10orf128Q5T292 105 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 LINC00472Q9H8W2 130 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 DNAH8Q96JB1 4490 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 ZZEF1O43149 2961 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 NWD2Q9ULI1 1742 aa-1.23□□□□□ -2.61
CASC4-210ENST00000559550 FHAD1B1AJZ9 1412 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms