RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CCL25O15444 150 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 MT-ND4LP03901 98 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
SNX1-207ENST00000559401 XCL1P47992 114 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 SMAGPQ0VAQ4 97 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 SS18Q15532 418 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 HIGD2BQ4VC39 106 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 CLLU1Q5K131 121 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 CFAP161Q6P656 301 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 C9orf163Q8N9P6 203 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 CHAC1Q9BUX1 264 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 TNFRSF6BO95407 300 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 ATP5L2Q7Z4Y8 100 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 MRPL52Q86TS9 123 aaKnown RBP5.3□□□□□ -1.56
SNX1-207ENST00000559401 ZNF664Q8N3J9 261 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 C15orf56Q8N910 161 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 CIRBP-AS1Q8TBR5 109 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 TMEM18Q96B42 140 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 ANAPC16Q96DE5 110 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
SNX1-207ENST00000559401 IGHV3-64A0A075B6Q5 118 aa5.29□□□□□ -1.56
SNX1-207ENST00000559401 LINC00959A0A1B0GUT2 108 aa5.29□□□□□ -1.56
SNX1-207ENST00000559401 NPYP01303 97 aa5.29□□□□□ -1.56
SNX1-207ENST00000559401 CNBPP62633 177 aaKnown RBP5.29□□□□□ -1.56
SNX1-207ENST00000559401 RNASE13Q5GAN3 156 aaKnown RBP5.29□□□□□ -1.56
SNX1-207ENST00000559401 ORMDL3Q8N138 153 aa5.29□□□□□ -1.56
SNX1-207ENST00000559401 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
SNX1-207ENST00000559401 SMIM2Q9BVW6 85 aa5.29□□□□□ -1.56
SNX1-207ENST00000559401 CDC42SE2Q9NRR3 84 aa5.29□□□□□ -1.56
SNX1-207ENST00000559401 TRBV24-1A0A075B6N3 115 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 TCAPO15273 167 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 PPBPP02775 128 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 FOXI1Q12951 378 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 TMEM136Q6ZRR5 245 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 Q6ZUT4 128 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 PRELID3AQ96N28 172 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 UBE2D4Q9Y2X8 147 aa5.28□□□□□ -1.56
SNX1-207ENST00000559401 TRAV13-1A0A0B4J241 112 aa5.27□□□□□ -1.57
SNX1-207ENST00000559401 IGHV1-58A0A0C4DH39 117 aa5.27□□□□□ -1.57
SNX1-207ENST00000559401 PHOX2AO14813 284 aa5.27□□□□□ -1.57
SNX1-207ENST00000559401 RAB5AP20339 215 aa5.27□□□□□ -1.57
SNX1-207ENST00000559401 MALP21145 153 aa5.27□□□□□ -1.57
SNX1-207ENST00000559401 RPL39P62891 51 aaKnown RBP5.27□□□□□ -1.57
SNX1-207ENST00000559401 RPL32P62910 135 aaKnown RBP5.27□□□□□ -1.57
SNX1-207ENST00000559401 UQCC3Q6UW78 93 aa5.27□□□□□ -1.57
SNX1-207ENST00000559401 SDIM1Q6ZPB5 146 aa5.27□□□□□ -1.57
SNX1-207ENST00000559401 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.27□□□□□ -1.57
SNX1-207ENST00000559401 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
SNX1-207ENST00000559401 LOC389332A0A1B0GUA5 103 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 C1orf196B1AJZ1 125 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 PANO1I0J062 215 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 ZNF561-AS1K7EIQ3 104 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 SLPIP03973 132 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 CHTF8P0CG12 524 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 CD164L2Q6UWJ8 174 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 COMMD7Q86VX2 200 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 SLC7A5P1Q8MH63 180 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 LINC00526Q96FQ7 95 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 TIMM21Q9BVV7 248 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 MAP1LC3AQ9H492 121 aa5.26□□□□□ -1.57
SNX1-207ENST00000559401 CSDC2Q9Y534 153 aaKnown RBP5.26□□□□□ -1.57
SNX1-207ENST00000559401 IGKV2-24A0A0C4DH68 120 aa5.25□□□□□ -1.57
SNX1-207ENST00000559401 TMEM218A2RU14 115 aa5.25□□□□□ -1.57
SNX1-207ENST00000559401 COX7A2LO14548 114 aa5.25□□□□□ -1.57
SNX1-207ENST00000559401 ADCYAP1P18509 176 aa5.25□□□□□ -1.57
SNX1-207ENST00000559401 RPL37AP61513 92 aaKnown RBP5.25□□□□□ -1.57
SNX1-207ENST00000559401 COX6A2Q02221 97 aa5.25□□□□□ -1.57
SNX1-207ENST00000559401 CTDSP1Q9GZU7 261 aa5.25□□□□□ -1.57
SNX1-207ENST00000559401 SPANXA1Q9NS26 97 aa5.25□□□□□ -1.57
SNX1-207ENST00000559401 IFITM10A6NMD0 228 aa5.24□□□□□ -1.57
SNX1-207ENST00000559401 ATP6V1G1O75348 118 aa5.24□□□□□ -1.57
SNX1-207ENST00000559401 S100A1P23297 94 aa5.24□□□□□ -1.57
SNX1-207ENST00000559401 IFI27P40305 119 aaPredicted RBP5.24□□□□□ -1.57
SNX1-207ENST00000559401 C5orf38Q86SI9 138 aa5.24□□□□□ -1.57
SNX1-207ENST00000559401 CARD19Q96LW7 228 aa5.24□□□□□ -1.57
SNX1-207ENST00000559401 OPRPNQ99935 248 aaPredicted RBP5.24□□□□□ -1.57
SNX1-207ENST00000559401 LAMTOR2Q9Y2Q5 125 aa5.24□□□□□ -1.57
SNX1-207ENST00000559401 SRRM2Q9UQ35 2752 aaKnown RBP5.24□□□□□ -1.57
SNX1-207ENST00000559401 FLG2Q5D862 2391 aaPredicted RBP5.23□□□□□ -1.57
SNX1-207ENST00000559401 A0A087WYN8 130 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 J3QL48 77 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 APOMO95445 188 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 S100PP25815 95 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 SYCNQ0VAF6 134 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 MAJINQ3KP22 176 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 PRSS3P2Q8NHM4 247 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 SPACA4Q8TDM5 124 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 CAMK2N2Q96S95 79 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 SEC11CQ9BY50 192 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
SNX1-207ENST00000559401 IGLV4-69A0A075B6H9 119 aa5.22□□□□□ -1.57
SNX1-207ENST00000559401 SPAG11BQ08648 103 aa5.22□□□□□ -1.57
SNX1-207ENST00000559401 CIRBPQ14011 172 aaKnown RBP5.22□□□□□ -1.57
SNX1-207ENST00000559401 KIAA1644Q3SXP7 199 aa5.22□□□□□ -1.57
SNX1-207ENST00000559401 Q8N8P6 123 aa5.22□□□□□ -1.57
SNX1-207ENST00000559401 IMMP2LQ96T52 175 aa5.22□□□□□ -1.57
SNX1-207ENST00000559401 CYSLTR1Q9Y271 337 aa5.22□□□□□ -1.57
SNX1-207ENST00000559401 FAT1Q14517 4588 aa5.22□□□□□ -1.57
SNX1-207ENST00000559401 DNAH8Q96JB1 4490 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms