RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 VCX2Q9H322 139 aa5.5□□□□□ -1.53
LRRC28-211ENST00000558890 C11orf68Q9H3H3 251 aaKnown RBP5.5□□□□□ -1.53
LRRC28-211ENST00000558890 MRPL16Q9NX20 251 aaKnown RBP5.5□□□□□ -1.53
LRRC28-211ENST00000558890 SPCS1Q9Y6A9 102 aa5.5□□□□□ -1.53
LRRC28-211ENST00000558890 DNAH1Q9P2D7 4330 aa5.5□□□□□ -1.53
LRRC28-211ENST00000558890 TENM2Q9NT68 2774 aa5.5□□□□□ -1.53
LRRC28-211ENST00000558890 SACSQ9NZJ4 4579 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 TRBV7-3A0A075B6L6 115 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 RS1O15537 224 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 RPL35AP18077 110 aaKnown RBP5.49□□□□□ -1.53
LRRC28-211ENST00000558890 CRYBA4P53673 196 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 CFAP126Q5VTH2 177 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 C1orf158Q8N1D5 194 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 C11orf72Q8NBR9 251 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 DEFB104AQ8WTQ1 72 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 C16orf74Q96GX8 76 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 SPANXA1Q9NS26 97 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 XCL2Q9UBD3 114 aa5.49□□□□□ -1.53
LRRC28-211ENST00000558890 IGLV4-3A0A075B6K6 122 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 IGHV3OR16-12A0A075B7B8 117 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 K7ERJ3 54 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 IGHV3-53P01767 116 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 P0DMU3 169 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 FAM231AP0DMU4 169 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 FAM231CP0DMU5 169 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 EMP1P54849 157 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 DAZ2Q13117 558 aaKnown RBP5.48□□□□□ -1.53
LRRC28-211ENST00000558890 SRSF9Q13242 221 aaKnown RBP eCLIP5.48□□□□□ -1.53
LRRC28-211ENST00000558890 COTL1Q14019 142 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 UFSP1Q6NVU6 142 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 IL17DQ8TAD2 202 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 RNASE8Q8TDE3 154 aaKnown RBP5.48□□□□□ -1.53
LRRC28-211ENST00000558890 PLEKHB2Q96CS7 222 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 OVOL2Q9BRP0 275 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 PYGO1Q9Y3Y4 419 aa5.48□□□□□ -1.53
LRRC28-211ENST00000558890 TRGV1A0A0A0MS02 117 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 LEPROTO15243 131 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 CIDEAO60543 219 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 AZU1P20160 251 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 SMAGPQ0VAQ4 97 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 RRN3P1Q2M238 152 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 DEFB135Q30KP9 77 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 C12orf74Q32Q52 190 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 Q8NAQ8 132 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 ZNF479Q96JC4 524 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 NAA38Q9BRA0 125 aaKnown RBP5.47□□□□□ -1.53
LRRC28-211ENST00000558890 CBY1Q9Y3M2 126 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 X6R8D5 127 aa5.47□□□□□ -1.53
LRRC28-211ENST00000558890 TMEM223A0PJW6 202 aa5.46□□□□□ -1.54
LRRC28-211ENST00000558890 GAGE12BA1L429 117 aa5.46□□□□□ -1.54
LRRC28-211ENST00000558890 LYRM9A8MSI8 78 aa5.46□□□□□ -1.54
LRRC28-211ENST00000558890 J3QQQ9 107 aa5.46□□□□□ -1.54
LRRC28-211ENST00000558890 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-211ENST00000558890 LYRM7Q5U5X0 104 aa5.46□□□□□ -1.54
LRRC28-211ENST00000558890 ZNRF2Q8NHG8 242 aa5.46□□□□□ -1.54
LRRC28-211ENST00000558890 PHLDA1Q8WV24 401 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-211ENST00000558890 SPANXB1Q9NS25 103 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-211ENST00000558890 TRAV4A0A0B4J268 109 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 A0A0J9YXV3 536 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 A0A0J9YY99 117 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 TRBV10-1A0A0K0K1A3 114 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 A0A1B0GWB2 263 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 IGLL5B9A064 214 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 K7EQD1 137 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 K7ERU9 68 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 RPL36AP83881 106 aaKnown RBP5.45□□□□□ -1.54
LRRC28-211ENST00000558890 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 RPL36ALQ969Q0 106 aaKnown RBP5.45□□□□□ -1.54
LRRC28-211ENST00000558890 AMELXQ99217 191 aa5.45□□□□□ -1.54
LRRC28-211ENST00000558890 OPRPNQ99935 248 aaPredicted RBP5.45□□□□□ -1.54
LRRC28-211ENST00000558890 KMT2AQ03164 3969 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 PLAC8L1A1L4L8 177 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 TMEM238C9JI98 176 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 PRM2P04554 102 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 TSPEAR-AS2P59090 65 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 MRPS36P82909 103 aaKnown RBP5.44□□□□□ -1.54
LRRC28-211ENST00000558890 RYR3Q15413 4870 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 OCIAD2Q56VL3 154 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 DGAT2L7PQ6IED9 249 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 Q6ZSN1 163 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 CHCHD7Q9BUK0 85 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 TIMM21Q9BVV7 248 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 RETNQ9HD89 108 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 VPS13DQ5THJ4 4388 aa5.44□□□□□ -1.54
LRRC28-211ENST00000558890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.43□□□□□ -1.54
LRRC28-211ENST00000558890 IGHV4-28A0A0C4DH34 117 aa5.43□□□□□ -1.54
LRRC28-211ENST00000558890 IGHV3-38A0A0C4DH36 116 aa5.43□□□□□ -1.54
LRRC28-211ENST00000558890 TINCRA0A1B0GVN0 87 aa5.43□□□□□ -1.54
LRRC28-211ENST00000558890 IGKV2-29A2NJV5 120 aaPredicted RBP5.43□□□□□ -1.54
LRRC28-211ENST00000558890 Q6ZUT4 128 aa5.43□□□□□ -1.54
LRRC28-211ENST00000558890 DAZ4Q86SG3 579 aaKnown RBP5.43□□□□□ -1.54
LRRC28-211ENST00000558890 SLC25A29Q8N8R3 303 aa5.43□□□□□ -1.54
LRRC28-211ENST00000558890 GEMIN7Q9H840 131 aaKnown RBP5.43□□□□□ -1.54
LRRC28-211ENST00000558890 DAZ3Q9NR90 486 aaKnown RBP5.43□□□□□ -1.54
LRRC28-211ENST00000558890 RYR2Q92736 4967 aa5.42□□□□□ -1.54
LRRC28-211ENST00000558890 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
LRRC28-211ENST00000558890 TRGV2A0A075B6R0 118 aa5.42□□□□□ -1.54
LRRC28-211ENST00000558890 SPART-AS1P0CW21 52 aa5.42□□□□□ -1.54
LRRC28-211ENST00000558890 UBE2D1P51668 147 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms