RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 NKX6-2Q9C056 277 aaPredicted RBP3.26□□□□□ -1.89
LRRC28-208ENST00000558771 GAGE2DQ9UEU5 116 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 TNFSF18Q9UNG2 199 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 H0Y9J4 135 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 IGLV7-43P04211 117 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 AKR1C3P42330 323 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 SYCNQ0VAF6 134 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 COTL1Q14019 142 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 PET117Q6UWS5 81 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 CCDC32Q9BV29 185 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
LRRC28-208ENST00000558771 IGHV1-58A0A0C4DH39 117 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 LOC107984640A0A0U1RRK4 108 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 CTXND1A0A1B0GTU2 59 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 BCL2P10415 239 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 XCL1P47992 114 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 C9orf116Q5BN46 136 aaPredicted RBP3.24□□□□□ -1.89
LRRC28-208ENST00000558771 RNASEKQ6P5S7 137 aaKnown RBP3.24□□□□□ -1.89
LRRC28-208ENST00000558771 RASL11AQ6T310 242 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 ENKURQ8TC29 256 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 MED28Q9H204 178 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 NIT2Q9NQR4 276 aa3.24□□□□□ -1.89
LRRC28-208ENST00000558771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.23□□□□□ -1.89
LRRC28-208ENST00000558771 TRAV1-1A0A0B4J248 108 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 IGKV2-29A2NJV5 120 aaPredicted RBP3.23□□□□□ -1.89
LRRC28-208ENST00000558771 INMT-MINDY4F8WBC2 141 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 CCL25O15444 150 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 SSNA1O43805 119 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 TSPAN13O95857 204 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 FGF6P10767 208 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 UBE2D1P51668 147 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 EIF5AP63241 154 aaKnown RBP3.23□□□□□ -1.89
LRRC28-208ENST00000558771 CST9LP1Q5W188 147 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 OR5A1Q8NGJ0 315 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 STOML3Q8TAV4 291 aa3.23□□□□□ -1.89
LRRC28-208ENST00000558771 IGLV4-69A0A075B6H9 119 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 A0A087WZ39 114 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 LINC00959A0A1B0GUT2 108 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.22□□□□□ -1.89
LRRC28-208ENST00000558771 NTF3P20783 257 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 RPL13AP40429 203 aaKnown RBP3.22□□□□□ -1.89
LRRC28-208ENST00000558771 FHITP49789 147 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 MEF2BQ02080 365 aaPredicted RBP3.22□□□□□ -1.89
LRRC28-208ENST00000558771 RPL18AQ02543 176 aaKnown RBP3.22□□□□□ -1.89
LRRC28-208ENST00000558771 BAGE2Q86Y30 109 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 LINC00469Q8N7U9 141 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 NUP35Q8NFH5 326 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 ISOC2Q96AB3 205 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 TCEAL7Q9BRU2 100 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 TPPP3Q9BW30 176 aa3.22□□□□□ -1.89
LRRC28-208ENST00000558771 MAP1LC3B2A6NCE7 125 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 H7C423 109 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 ATP6V1G1O75348 118 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 APOMO95445 188 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 IGLC6P0CF74 106 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 PAPPA-AS1Q5QFB9 102 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 RPL7L1Q6DKI1 246 aaKnown RBP3.21□□□□□ -1.9
LRRC28-208ENST00000558771 SLC7A5P1Q8MH63 180 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 CAMK2N2Q96S95 79 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 MAP1LC3BQ9GZQ8 125 aa3.21□□□□□ -1.9
LRRC28-208ENST00000558771 FAM168BA1KXE4 195 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 NCR2O95944 276 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 APCSP02743 223 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 S100A9P06702 114 aaKnown RBP3.2□□□□□ -1.9
LRRC28-208ENST00000558771 TRGC1P0CF51 173 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 VPREB1P12018 145 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 ZNF25P17030 456 aaPredicted RBP3.2□□□□□ -1.9
LRRC28-208ENST00000558771 DEFA1P59665 94 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 SS18Q15532 418 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 AKR1C8PQ5T2L2 129 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 CD164L2Q6UWJ8 174 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 SMIM29Q86T20 159 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 GATD1Q8NB37 220 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 BTF3L4Q96K17 158 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 OPRPNQ99935 248 aaPredicted RBP3.2□□□□□ -1.9
LRRC28-208ENST00000558771 MARVELD1Q9BSK0 173 aa3.2□□□□□ -1.9
LRRC28-208ENST00000558771 CARHSP1Q9Y2V2 147 aaKnown RBP3.2□□□□□ -1.9
LRRC28-208ENST00000558771 BORCS7-ASMTA0A0B4J1R7 106 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 BCL2L11O43521 198 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 UPK1BO75841 260 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 IFITM3Q01628 133 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 EIF5AL1Q6IS14 154 aaKnown RBP3.19□□□□□ -1.9
LRRC28-208ENST00000558771 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 Q75L30 129 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 OR2D3Q8NGH3 330 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 TSKUQ8WUA8 353 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 RPL39LQ96EH5 51 aaKnown RBP3.19□□□□□ -1.9
LRRC28-208ENST00000558771 TMEM101Q96IK0 257 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 C2orf48Q96LS8 159 aa3.19□□□□□ -1.9
LRRC28-208ENST00000558771 RPP21Q9H633 154 aaKnown RBP3.19□□□□□ -1.9
LRRC28-208ENST00000558771 C19orf71A6NCJ1 209 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 SDHAF1A6NFY7 115 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 F2Z2F3 143 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 COX7A2LO14548 114 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 ESDP10768 282 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 RPS20P60866 119 aaKnown RBP3.18□□□□□ -1.9
LRRC28-208ENST00000558771 Q5BKY6 102 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms