RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 RIGQ13278 110 aa10.01□□□□□ -0.81
CSHL1-208ENST00000558609 AMMECR1LQ6DCA0 310 aa10.01□□□□□ -0.81
CSHL1-208ENST00000558609 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
CSHL1-208ENST00000558609 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
CSHL1-208ENST00000558609 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
CSHL1-208ENST00000558609 TRAV9-1A0A075B6T8 112 aa10□□□□□ -0.81
CSHL1-208ENST00000558609 FGF6P10767 208 aa10□□□□□ -0.81
CSHL1-208ENST00000558609 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
CSHL1-208ENST00000558609 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
CSHL1-208ENST00000558609 CNBPP62633 177 aaKnown RBP10□□□□□ -0.81
CSHL1-208ENST00000558609 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
CSHL1-208ENST00000558609 ESDP10768 282 aa9.99□□□□□ -0.81
CSHL1-208ENST00000558609 ZNF25P17030 456 aaPredicted RBP9.99□□□□□ -0.81
CSHL1-208ENST00000558609 RAB5AP20339 215 aa9.99□□□□□ -0.81
CSHL1-208ENST00000558609 RNASEKQ6P5S7 137 aaKnown RBP9.99□□□□□ -0.81
CSHL1-208ENST00000558609 AMN1Q8IY45 258 aa9.99□□□□□ -0.81
CSHL1-208ENST00000558609 HMCN2Q8NDA2 5059 aa9.99□□□□□ -0.81
CSHL1-208ENST00000558609 TRBV24-1A0A075B6N3 115 aa9.98□□□□□ -0.81
CSHL1-208ENST00000558609 TRBV27A0A0K0K1C4 114 aa9.98□□□□□ -0.81
CSHL1-208ENST00000558609 hDV102S1A0JD36 115 aa9.98□□□□□ -0.81
CSHL1-208ENST00000558609 TSHBP01222 138 aa9.98□□□□□ -0.81
CSHL1-208ENST00000558609 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
CSHL1-208ENST00000558609 IGKV3OR2-268A0A0C4DH90 116 aa9.97□□□□□ -0.81
CSHL1-208ENST00000558609 GAGE12HA6NDE8 117 aa9.97□□□□□ -0.81
CSHL1-208ENST00000558609 AP5S1Q9NUS5 200 aa9.97□□□□□ -0.81
CSHL1-208ENST00000558609 PPP1R17O96001 155 aa9.96□□□□□ -0.82
CSHL1-208ENST00000558609 SLPIP03973 132 aa9.96□□□□□ -0.82
CSHL1-208ENST00000558609 COX19Q49B96 90 aa9.96□□□□□ -0.82
CSHL1-208ENST00000558609 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
CSHL1-208ENST00000558609 CFAP161Q6P656 301 aa9.96□□□□□ -0.82
CSHL1-208ENST00000558609 CHCHD10Q8WYQ3 142 aaPredicted RBP9.96□□□□□ -0.82
CSHL1-208ENST00000558609 TMEM101Q96IK0 257 aa9.96□□□□□ -0.82
CSHL1-208ENST00000558609 YPEL4Q96NS1 127 aa9.96□□□□□ -0.82
CSHL1-208ENST00000558609 VCYO14598 125 aa9.95□□□□□ -0.82
CSHL1-208ENST00000558609 KRTAP10-4P60372 401 aaPredicted RBP9.95□□□□□ -0.82
CSHL1-208ENST00000558609 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
CSHL1-208ENST00000558609 NRACQ8N912 160 aa9.95□□□□□ -0.82
CSHL1-208ENST00000558609 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
CSHL1-208ENST00000558609 TMA7Q9Y2S6 64 aaKnown RBP9.95□□□□□ -0.82
CSHL1-208ENST00000558609 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.94□□□□□ -0.82
CSHL1-208ENST00000558609 A0A1B0GW15 77 aa9.94□□□□□ -0.82
CSHL1-208ENST00000558609 C1orf196B1AJZ1 125 aa9.94□□□□□ -0.82
CSHL1-208ENST00000558609 SMKR1H3BMG3 65 aa9.94□□□□□ -0.82
CSHL1-208ENST00000558609 CAMPP49913 170 aa9.94□□□□□ -0.82
CSHL1-208ENST00000558609 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
CSHL1-208ENST00000558609 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
CSHL1-208ENST00000558609 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
CSHL1-208ENST00000558609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
CSHL1-208ENST00000558609 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
CSHL1-208ENST00000558609 S100A8P05109 93 aa9.93□□□□□ -0.82
CSHL1-208ENST00000558609 SUMO2P61956 95 aaKnown RBP9.93□□□□□ -0.82
CSHL1-208ENST00000558609 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
CSHL1-208ENST00000558609 PANO1I0J062 215 aa9.92□□□□□ -0.82
CSHL1-208ENST00000558609 FOXI1Q12951 378 aa9.92□□□□□ -0.82
CSHL1-208ENST00000558609 CIRBPQ14011 172 aaKnown RBP9.92□□□□□ -0.82
CSHL1-208ENST00000558609 MRPL51Q4U2R6 128 aaKnown RBP9.92□□□□□ -0.82
CSHL1-208ENST00000558609 ATP5L2Q7Z4Y8 100 aa9.92□□□□□ -0.82
CSHL1-208ENST00000558609 CDC42SE2Q9NRR3 84 aa9.92□□□□□ -0.82
CSHL1-208ENST00000558609 FCER1GP30273 86 aa9.91□□□□□ -0.82
CSHL1-208ENST00000558609 RAB5BP61020 215 aa9.91□□□□□ -0.82
CSHL1-208ENST00000558609 HBBP68871 147 aa9.91□□□□□ -0.82
CSHL1-208ENST00000558609 MT-ND6P03923 174 aa9.9□□□□□ -0.82
CSHL1-208ENST00000558609 TRGC2P03986 189 aa9.9□□□□□ -0.82
CSHL1-208ENST00000558609 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
CSHL1-208ENST00000558609 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.82
CSHL1-208ENST00000558609 KIR2DL4Q99706 377 aa9.9□□□□□ -0.82
CSHL1-208ENST00000558609 C20orf78Q9BR46 151 aa9.9□□□□□ -0.82
CSHL1-208ENST00000558609 GNB1LQ9BYB4 327 aa9.9□□□□□ -0.82
CSHL1-208ENST00000558609 CSDC2Q9Y534 153 aaKnown RBP9.9□□□□□ -0.82
CSHL1-208ENST00000558609 GVQW2A0A096LPI5 108 aaPredicted RBP9.89□□□□□ -0.83
CSHL1-208ENST00000558609 CCL25O15444 150 aa9.89□□□□□ -0.83
CSHL1-208ENST00000558609 XCL1P47992 114 aa9.89□□□□□ -0.83
CSHL1-208ENST00000558609 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
CSHL1-208ENST00000558609 SS18Q15532 418 aa9.89□□□□□ -0.83
CSHL1-208ENST00000558609 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
CSHL1-208ENST00000558609 MRPL18Q9H0U6 180 aaKnown RBP9.89□□□□□ -0.83
CSHL1-208ENST00000558609 A0A1B0GXF2 115 aa9.88□□□□□ -0.83
CSHL1-208ENST00000558609 KRTAP29-1A8MX34 341 aaPredicted RBP9.88□□□□□ -0.83
CSHL1-208ENST00000558609 J3QL48 77 aa9.88□□□□□ -0.83
CSHL1-208ENST00000558609 CKS2P33552 79 aa9.88□□□□□ -0.83
CSHL1-208ENST00000558609 RPL37AP61513 92 aaKnown RBP9.88□□□□□ -0.83
CSHL1-208ENST00000558609 SMAGPQ0VAQ4 97 aa9.88□□□□□ -0.83
CSHL1-208ENST00000558609 LRP1Q07954 4544 aaKnown RBP9.87□□□□□ -0.83
CSHL1-208ENST00000558609 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
CSHL1-208ENST00000558609 TMEM136Q6ZRR5 245 aa9.87□□□□□ -0.83
CSHL1-208ENST00000558609 UBE2D4Q9Y2X8 147 aa9.87□□□□□ -0.83
CSHL1-208ENST00000558609 IGHV1-58A0A0C4DH39 117 aa9.86□□□□□ -0.83
CSHL1-208ENST00000558609 TCAPO15273 167 aa9.86□□□□□ -0.83
CSHL1-208ENST00000558609 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
CSHL1-208ENST00000558609 CHTF8P0CG12 524 aa9.86□□□□□ -0.83
CSHL1-208ENST00000558609 SPACA4Q8TDM5 124 aa9.86□□□□□ -0.83
CSHL1-208ENST00000558609 DPH3Q96FX2 82 aa9.86□□□□□ -0.83
CSHL1-208ENST00000558609 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
CSHL1-208ENST00000558609 A0A087WYN8 130 aa9.85□□□□□ -0.83
CSHL1-208ENST00000558609 D6R8Y8 96 aa9.85□□□□□ -0.83
CSHL1-208ENST00000558609 S100A6P06703 90 aa9.85□□□□□ -0.83
CSHL1-208ENST00000558609 COX6A2Q02221 97 aa9.85□□□□□ -0.83
CSHL1-208ENST00000558609 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
CSHL1-208ENST00000558609 PHOX2AO14813 284 aa9.84□□□□□ -0.83
CSHL1-208ENST00000558609 PPBPP02775 128 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms