RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 SRSF3P84103 164 aaKnown RBP10.37□□□□□ -0.75
AC027088.1-201ENST00000557966 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
AC027088.1-201ENST00000557966 ST20Q9HBF5 79 aa10.37□□□□□ -0.75
AC027088.1-201ENST00000557966 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
AC027088.1-201ENST00000557966 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
AC027088.1-201ENST00000557966 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
AC027088.1-201ENST00000557966 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
AC027088.1-201ENST00000557966 CHCHD10Q8WYQ3 142 aaPredicted RBP10.36□□□□□ -0.75
AC027088.1-201ENST00000557966 TMEM241Q24JQ0 296 aa10.35□□□□□ -0.75
AC027088.1-201ENST00000557966 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
AC027088.1-201ENST00000557966 AP5S1Q9NUS5 200 aa10.35□□□□□ -0.75
AC027088.1-201ENST00000557966 IGHV3-64A0A075B6Q5 118 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 CHTF8P0CG12 524 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 HNRNPA3P51991 378 aaKnown RBP10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 RPL37AP61513 92 aaKnown RBP10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 FOXI1Q12951 378 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 ADIRFQ15847 76 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 HIGD2BQ4VC39 106 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
AC027088.1-201ENST00000557966 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
AC027088.1-201ENST00000557966 RIGQ13278 110 aa10.33□□□□□ -0.76
AC027088.1-201ENST00000557966 NRACQ8N912 160 aa10.33□□□□□ -0.76
AC027088.1-201ENST00000557966 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
AC027088.1-201ENST00000557966 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
AC027088.1-201ENST00000557966 RHEBQ15382 184 aa10.32□□□□□ -0.76
AC027088.1-201ENST00000557966 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
AC027088.1-201ENST00000557966 NAT8BQ9UHF3 227 aa10.32□□□□□ -0.76
AC027088.1-201ENST00000557966 HMCN2Q8NDA2 5059 aa10.31□□□□□ -0.76
AC027088.1-201ENST00000557966 GVQW2A0A096LPI5 108 aaPredicted RBP10.31□□□□□ -0.76
AC027088.1-201ENST00000557966 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
AC027088.1-201ENST00000557966 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
AC027088.1-201ENST00000557966 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
AC027088.1-201ENST00000557966 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
AC027088.1-201ENST00000557966 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
AC027088.1-201ENST00000557966 SMIM27A0A1W2PRY6 76 aa10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 C7orf77A4D0Y5 90 aa10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 CCL25O15444 150 aa10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 SCO1O75880 301 aa10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 XCL1P47992 114 aa10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 PNRC1Q12796 327 aaPredicted RBP10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 MRPL51Q4U2R6 128 aaKnown RBP10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
AC027088.1-201ENST00000557966 A0A087WYN8 130 aa10.29□□□□□ -0.76
AC027088.1-201ENST00000557966 SMCPP49901 116 aaPredicted RBP10.29□□□□□ -0.76
AC027088.1-201ENST00000557966 SUMO2P61956 95 aaKnown RBP10.29□□□□□ -0.76
AC027088.1-201ENST00000557966 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
AC027088.1-201ENST00000557966 SMCO4Q9NRQ5 59 aa10.29□□□□□ -0.76
AC027088.1-201ENST00000557966 COX6A2Q02221 97 aa10.28□□□□□ -0.76
AC027088.1-201ENST00000557966 VCYO14598 125 aa10.27□□□□□ -0.77
AC027088.1-201ENST00000557966 CAMPP49913 170 aa10.27□□□□□ -0.77
AC027088.1-201ENST00000557966 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.77
AC027088.1-201ENST00000557966 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
AC027088.1-201ENST00000557966 FCER1GP30273 86 aa10.26□□□□□ -0.77
AC027088.1-201ENST00000557966 LINC00526Q96FQ7 95 aa10.26□□□□□ -0.77
AC027088.1-201ENST00000557966 PLAC8Q9NZF1 115 aa10.26□□□□□ -0.77
AC027088.1-201ENST00000557966 UBE2D4Q9Y2X8 147 aa10.26□□□□□ -0.77
AC027088.1-201ENST00000557966 PPP1R17O96001 155 aa10.25□□□□□ -0.77
AC027088.1-201ENST00000557966 OXTP01178 125 aa10.25□□□□□ -0.77
AC027088.1-201ENST00000557966 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
AC027088.1-201ENST00000557966 MRPL54Q6P161 138 aaKnown RBP10.25□□□□□ -0.77
AC027088.1-201ENST00000557966 IGHV1-58A0A0C4DH39 117 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 IGKV2-24A0A0C4DH68 120 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 PPP1R2P9O14990 202 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 SS18Q15532 418 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
AC027088.1-201ENST00000557966 A0A096LNI7 61 aa10.23□□□□□ -0.77
AC027088.1-201ENST00000557966 A0A1B0GW15 77 aa10.23□□□□□ -0.77
AC027088.1-201ENST00000557966 Q6ZUT4 128 aa10.23□□□□□ -0.77
AC027088.1-201ENST00000557966 TMA7Q9Y2S6 64 aaKnown RBP10.23□□□□□ -0.77
AC027088.1-201ENST00000557966 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
AC027088.1-201ENST00000557966 TNXBP22105 4242 aa10.22□□□□□ -0.77
AC027088.1-201ENST00000557966 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
AC027088.1-201ENST00000557966 CKS2P33552 79 aa10.22□□□□□ -0.77
AC027088.1-201ENST00000557966 HBBP68871 147 aa10.22□□□□□ -0.77
AC027088.1-201ENST00000557966 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
AC027088.1-201ENST00000557966 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
AC027088.1-201ENST00000557966 RPS10P5Q9NQ39 176 aa10.22□□□□□ -0.77
AC027088.1-201ENST00000557966 D6R8Y8 96 aa10.21□□□□□ -0.77
AC027088.1-201ENST00000557966 TNFRSF6BO95407 300 aa10.21□□□□□ -0.77
AC027088.1-201ENST00000557966 MT-ND4LP03901 98 aa10.21□□□□□ -0.77
AC027088.1-201ENST00000557966 RPL32P62910 135 aaKnown RBP10.21□□□□□ -0.77
AC027088.1-201ENST00000557966 CARD19Q96LW7 228 aa10.21□□□□□ -0.77
AC027088.1-201ENST00000557966 CTDSP1Q9GZU7 261 aa10.21□□□□□ -0.77
AC027088.1-201ENST00000557966 PHOX2AO14813 284 aa10.2□□□□□ -0.78
AC027088.1-201ENST00000557966 NPYP01303 97 aa10.2□□□□□ -0.78
AC027088.1-201ENST00000557966 SMIM2Q9BVW6 85 aa10.2□□□□□ -0.78
AC027088.1-201ENST00000557966 TRAV13-1A0A0B4J241 112 aa10.19□□□□□ -0.78
AC027088.1-201ENST00000557966 C1orf196B1AJZ1 125 aa10.19□□□□□ -0.78
AC027088.1-201ENST00000557966 LCE2BO14633 110 aa10.19□□□□□ -0.78
AC027088.1-201ENST00000557966 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
AC027088.1-201ENST00000557966 STPG4Q8N801 248 aa10.19□□□□□ -0.78
AC027088.1-201ENST00000557966 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
AC027088.1-201ENST00000557966 TIMM21Q9BVV7 248 aa10.19□□□□□ -0.78
AC027088.1-201ENST00000557966 ZNF561-AS1K7EIQ3 104 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms