RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 GNG4P50150 75 aa11.06□□□□□ -0.64
ABCD4-228ENST00000557588 EIF5AP63241 154 aaKnown RBP11.06□□□□□ -0.64
ABCD4-228ENST00000557588 CCL20P78556 96 aa11.06□□□□□ -0.64
ABCD4-228ENST00000557588 EIF5AL1Q6IS14 154 aaKnown RBP11.06□□□□□ -0.64
ABCD4-228ENST00000557588 I3L3M4 83 aa11.05□□□□□ -0.64
ABCD4-228ENST00000557588 KRTAP1-4P0C5Y4 121 aa11.05□□□□□ -0.64
ABCD4-228ENST00000557588 TEX261Q6UWH6 196 aa11.05□□□□□ -0.64
ABCD4-228ENST00000557588 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
ABCD4-228ENST00000557588 CDC42SE2Q9NRR3 84 aa11.05□□□□□ -0.64
ABCD4-228ENST00000557588 TRBV20OR9-2A0A075B6H5 130 aa11.04□□□□□ -0.64
ABCD4-228ENST00000557588 RAB19A4D1S5 217 aa11.04□□□□□ -0.64
ABCD4-228ENST00000557588 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
ABCD4-228ENST00000557588 MRPL52Q86TS9 123 aaKnown RBP11.04□□□□□ -0.64
ABCD4-228ENST00000557588 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
ABCD4-228ENST00000557588 GNG13Q9P2W3 67 aa11.04□□□□□ -0.64
ABCD4-228ENST00000557588 TRBV6-5A0A0K0K1A5 114 aa11.03□□□□□ -0.64
ABCD4-228ENST00000557588 MALP21145 153 aa11.03□□□□□ -0.64
ABCD4-228ENST00000557588 C2orf48Q96LS8 159 aa11.03□□□□□ -0.64
ABCD4-228ENST00000557588 BIN3Q9NQY0 253 aa11.03□□□□□ -0.64
ABCD4-228ENST00000557588 COX7A2LO14548 114 aa11.02□□□□□ -0.65
ABCD4-228ENST00000557588 BCL2L11O43521 198 aa11.02□□□□□ -0.65
ABCD4-228ENST00000557588 TSHBP01222 138 aa11.02□□□□□ -0.65
ABCD4-228ENST00000557588 PMCHP20382 165 aa11.02□□□□□ -0.65
ABCD4-228ENST00000557588 ZNF345Q14585 488 aa11.02□□□□□ -0.65
ABCD4-228ENST00000557588 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
ABCD4-228ENST00000557588 NUDT10Q8NFP7 164 aa11.01□□□□□ -0.65
ABCD4-228ENST00000557588 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
ABCD4-228ENST00000557588 NUDT11Q96G61 164 aa11.01□□□□□ -0.65
ABCD4-228ENST00000557588 RPL13AP40429 203 aaKnown RBP11□□□□□ -0.65
ABCD4-228ENST00000557588 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
ABCD4-228ENST00000557588 KRTAP11-1Q8IUC1 163 aa11□□□□□ -0.65
ABCD4-228ENST00000557588 TMEM242Q9NWH2 141 aa11□□□□□ -0.65
ABCD4-228ENST00000557588 A0A087WZ39 114 aa10.99□□□□□ -0.65
ABCD4-228ENST00000557588 C1orf196B1AJZ1 125 aa10.99□□□□□ -0.65
ABCD4-228ENST00000557588 FOXA3P55318 350 aaPredicted RBP10.99□□□□□ -0.65
ABCD4-228ENST00000557588 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
ABCD4-228ENST00000557588 RPP21Q9H633 154 aaKnown RBP10.99□□□□□ -0.65
ABCD4-228ENST00000557588 TRAV1-1A0A0B4J248 108 aa10.98□□□□□ -0.65
ABCD4-228ENST00000557588 PDE6DO43924 150 aa10.98□□□□□ -0.65
ABCD4-228ENST00000557588 UBE2D1P51668 147 aa10.98□□□□□ -0.65
ABCD4-228ENST00000557588 C7orf77A4D0Y5 90 aa10.97□□□□□ -0.65
ABCD4-228ENST00000557588 OPRPNQ99935 248 aaPredicted RBP10.97□□□□□ -0.65
ABCD4-228ENST00000557588 SPAG11BQ08648 103 aa10.96□□□□□ -0.65
ABCD4-228ENST00000557588 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.65
ABCD4-228ENST00000557588 FAM168BA1KXE4 195 aa10.95□□□□□ -0.66
ABCD4-228ENST00000557588 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
ABCD4-228ENST00000557588 TRBV27A0A0K0K1C4 114 aa10.94□□□□□ -0.66
ABCD4-228ENST00000557588 SMLR1H3BR10 107 aa10.94□□□□□ -0.66
ABCD4-228ENST00000557588 MED9Q9NWA0 146 aa10.94□□□□□ -0.66
ABCD4-228ENST00000557588 MRPL35Q9NZE8 188 aaKnown RBP10.94□□□□□ -0.66
ABCD4-228ENST00000557588 CSDC2Q9Y534 153 aaKnown RBP10.94□□□□□ -0.66
ABCD4-228ENST00000557588 POLR2KP53803 58 aaKnown RBP10.93□□□□□ -0.66
ABCD4-228ENST00000557588 C5orf38Q86SI9 138 aa10.93□□□□□ -0.66
ABCD4-228ENST00000557588 OR10D4PQ8NGN7 298 aa10.93□□□□□ -0.66
ABCD4-228ENST00000557588 KANTRA0A1W2PQU2 76 aa10.92□□□□□ -0.66
ABCD4-228ENST00000557588 K7EN84 100 aa10.92□□□□□ -0.66
ABCD4-228ENST00000557588 IMMP2LQ96T52 175 aa10.92□□□□□ -0.66
ABCD4-228ENST00000557588 CARHSP1Q9Y2V2 147 aaKnown RBP10.92□□□□□ -0.66
ABCD4-228ENST00000557588 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
ABCD4-228ENST00000557588 TRAV13-1A0A0B4J241 112 aa10.91□□□□□ -0.66
ABCD4-228ENST00000557588 F8WDY8 70 aa10.91□□□□□ -0.66
ABCD4-228ENST00000557588 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
ABCD4-228ENST00000557588 RNASE13Q5GAN3 156 aaKnown RBP10.91□□□□□ -0.66
ABCD4-228ENST00000557588 FAM19A5Q7Z5A7 132 aaPredicted RBP10.91□□□□□ -0.66
ABCD4-228ENST00000557588 HMSDA8MTL9 139 aa10.9□□□□□ -0.66
ABCD4-228ENST00000557588 TEX46H3BTG2 121 aa10.9□□□□□ -0.66
ABCD4-228ENST00000557588 SMAGPQ0VAQ4 97 aa10.89□□□□□ -0.67
ABCD4-228ENST00000557588 KRTAP7-1Q8IUC3 87 aa10.89□□□□□ -0.67
ABCD4-228ENST00000557588 M0QXV9 152 aa10.88□□□□□ -0.67
ABCD4-228ENST00000557588 Q6ZUT4 128 aa10.88□□□□□ -0.67
ABCD4-228ENST00000557588 MUC17Q685J3 4493 aa10.88□□□□□ -0.67
ABCD4-228ENST00000557588 NDUFA1O15239 70 aa10.87□□□□□ -0.67
ABCD4-228ENST00000557588 OCC1Q8TAD7 63 aa10.87□□□□□ -0.67
ABCD4-228ENST00000557588 ORAOV1Q8WV07 137 aa10.87□□□□□ -0.67
ABCD4-228ENST00000557588 SMDT1Q9H4I9 107 aa10.87□□□□□ -0.67
ABCD4-228ENST00000557588 FCER1GP30273 86 aa10.86□□□□□ -0.67
ABCD4-228ENST00000557588 UBE2BP63146 152 aa10.86□□□□□ -0.67
ABCD4-228ENST00000557588 C10orf25Q5T742 122 aa10.86□□□□□ -0.67
ABCD4-228ENST00000557588 TMEM191AQ9H0A3 160 aa10.86□□□□□ -0.67
ABCD4-228ENST00000557588 C6orf48Q9UBA6 75 aa10.86□□□□□ -0.67
ABCD4-228ENST00000557588 TIMM21Q9BVV7 248 aa10.85□□□□□ -0.67
ABCD4-228ENST00000557588 A8MWL6 223 aa10.84□□□□□ -0.67
ABCD4-228ENST00000557588 VCYO14598 125 aa10.84□□□□□ -0.67
ABCD4-228ENST00000557588 TSPAN13O95857 204 aa10.84□□□□□ -0.67
ABCD4-228ENST00000557588 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
ABCD4-228ENST00000557588 CT83Q5H943 113 aa10.84□□□□□ -0.67
ABCD4-228ENST00000557588 IGHV3OR16-9A0A0B4J2B5 98 aa10.83□□□□□ -0.68
ABCD4-228ENST00000557588 GATCO43716 136 aaKnown RBP10.83□□□□□ -0.68
ABCD4-228ENST00000557588 RAB4AP20338 218 aa10.83□□□□□ -0.68
ABCD4-228ENST00000557588 GAGE2EQ4V326 116 aa10.83□□□□□ -0.68
ABCD4-228ENST00000557588 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
ABCD4-228ENST00000557588 BORCS7Q96B45 105 aa10.83□□□□□ -0.68
ABCD4-228ENST00000557588 GAGE2DQ9UEU5 116 aa10.83□□□□□ -0.68
ABCD4-228ENST00000557588 TAGLN2P37802 199 aaKnown RBP10.82□□□□□ -0.68
ABCD4-228ENST00000557588 UNQ6190/PRO20217Q6UXQ8 127 aa10.82□□□□□ -0.68
ABCD4-228ENST00000557588 ZNF861PO60384 105 aa10.81□□□□□ -0.68
ABCD4-228ENST00000557588 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
ABCD4-228ENST00000557588 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
ABCD4-228ENST00000557588 SUMO2P61956 95 aaKnown RBP10.8□□□□□ -0.68
ABCD4-228ENST00000557588 NRACQ8N912 160 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms