RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 LEPROTL1O95214 131 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 S100A3P33764 101 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 RPL28P46779 137 aaKnown RBP0.94□□□□□ -2.26
HIF1A-212ENST00000557538 BSPH1Q075Z2 132 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 ADIGQ0VDE8 80 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 IGFL1Q6UW32 110 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 C2orf82Q6UX34 121 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 MUC7Q8TAX7 377 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 ZCCHC13Q8WW36 166 aaKnown RBP0.94□□□□□ -2.26
HIF1A-212ENST00000557538 CLEC2BQ92478 149 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 CHCHD7Q9BUK0 85 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 PSENENQ9NZ42 101 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 TIMM9Q9Y5J7 89 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-212ENST00000557538 TRAV40A0A0B4J280 105 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV3-30P01768 117 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV3-33P01772 117 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV3-30-5P0DP03 117 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 TSPEAR-AS2P59090 65 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 SERF2P84101 59 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 HCP5Q6MZN7 132 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 TMEM141Q96I45 108 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 XAGE1AQ9HD64 81 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 OSTCQ9NRP0 149 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 USP24Q9UPU5 2620 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 CEP192Q8TEP8 1941 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 CRYM-AS1A6NIL9 109 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 LINC01549A6NIU2 74 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 IGIPA6NJ69 53 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 HCG22E2RYF7 251 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 F8WEM9 126 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 J3QLW9 94 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 SH2D1AO60880 128 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 IFI27P40305 119 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-212ENST00000557538 CNBPP62633 177 aaKnown RBP0.94□□□□□ -2.26
HIF1A-212ENST00000557538 POLEQ07864 2286 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 TXNDC17Q9BRA2 123 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 C8orf17Q9NRJ1 99 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 GNG13Q9P2W3 67 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 PHLDA3Q9Y5J5 127 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 A0A1W2PNM2 257 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 IL4P05112 153 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 CTSGP08311 255 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 C9orf116Q5BN46 136 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-212ENST00000557538 KPRPQ5T749 579 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-212ENST00000557538 C6orf201Q7Z4U5 140 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 RPRMLQ8N4K4 120 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 SPTSSAQ969W0 71 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 DYNLRB1Q9NP97 96 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 TMEM14BQ9NUH8 114 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 DOCK11Q5JSL3 2073 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 SPENQ96T58 3664 aaKnown RBP0.93□□□□□ -2.26
HIF1A-212ENST00000557538 CFAP54Q96N23 3096 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 ANKRD12Q6UB98 2062 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 TET2Q6N021 2002 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-212ENST00000557538 BAALC-AS2P0C853 105 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 CKS2P33552 79 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 MIR17HGQ75NE6 70 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 Q8N6K4 173 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 RMI2Q96E14 147 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 TAC3Q9UHF0 121 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 TDRD6O60522 2096 aaKnown RBP0.93□□□□□ -2.26
HIF1A-212ENST00000557538 DYSFO75923 2080 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 MPDZO75970 2070 aa0.93□□□□□ -2.26
HIF1A-212ENST00000557538 A0A087WVE0 104 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 TMSB15BA0A087X1C1 80 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 A0A1B0GWA3 101 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 C11orf86A6NJI1 115 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 C17orf51A8MQB3 221 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 TMEM14DPA8MWL7 114 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 ATXN8Q156A1 80 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 LINC00483Q53H64 154 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 LCE3AQ5TA76 89 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 ATP5EP2Q5VTU8 51 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 C20orf197Q8N268 126 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 TTTY13Q9BZ97 58 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 CHD8Q9HCK8 2581 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 ABCA7Q8IZY2 2146 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 LECT2O14960 151 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 CMC4P56277 68 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-212ENST00000557538 FXYD6P3P58550 94 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 PLGLAQ15195 96 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 SPANXN1Q5VSR9 72 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 C1orf64Q8NEQ6 169 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 CIRBP-AS1Q8TBR5 109 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 DYNLRB2Q8TF09 96 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 LHFPL6Q9Y693 200 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 RELNP78509 3460 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 SZT2Q5T011 3432 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 IGLV2-18A0A075B6J9 118 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV3-73A0A0B4J1V6 119 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 A0A0J9YY99 117 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 CEBPZOSA8MTT3 80 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 LY6HO94772 140 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 ZNF818PQ6ZRF7 136 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 ZNF833PQ6ZTB9 187 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 PRO1854Q9UHT4 67 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 CR1P17927 2039 aa0.92□□□□□ -2.26
HIF1A-212ENST00000557538 SCN3AQ9NY46 2000 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 UTRNP46939 3433 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms