RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 MYCBP2O75592 4640 aa11.29□□□□□ -0.6
NEDD1-212ENST00000557478 TSHBP01222 138 aa11.29□□□□□ -0.6
NEDD1-212ENST00000557478 SUMO2P61956 95 aaKnown RBP11.29□□□□□ -0.6
NEDD1-212ENST00000557478 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
NEDD1-212ENST00000557478 IGKV3OR2-268A0A0C4DH90 116 aa11.28□□□□□ -0.6
NEDD1-212ENST00000557478 RAB14P61106 215 aa11.28□□□□□ -0.6
NEDD1-212ENST00000557478 SS18Q15532 418 aa11.28□□□□□ -0.6
NEDD1-212ENST00000557478 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
NEDD1-212ENST00000557478 RPL32P62910 135 aaKnown RBP11.27□□□□□ -0.61
NEDD1-212ENST00000557478 HERC1Q15751 4861 aa11.26□□□□□ -0.61
NEDD1-212ENST00000557478 TRBV24-1A0A075B6N3 115 aa11.26□□□□□ -0.61
NEDD1-212ENST00000557478 C9JQL5 133 aa11.26□□□□□ -0.61
NEDD1-212ENST00000557478 PPBPP02775 128 aa11.26□□□□□ -0.61
NEDD1-212ENST00000557478 RPS10P46783 165 aaKnown RBP11.26□□□□□ -0.61
NEDD1-212ENST00000557478 HBBP68871 147 aa11.26□□□□□ -0.61
NEDD1-212ENST00000557478 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
NEDD1-212ENST00000557478 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
NEDD1-212ENST00000557478 CDC42SE2Q9NRR3 84 aa11.26□□□□□ -0.61
NEDD1-212ENST00000557478 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
NEDD1-212ENST00000557478 LINC00959A0A1B0GUT2 108 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 J3QL48 77 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 PHOX2AO14813 284 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 CKS2P33552 79 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
NEDD1-212ENST00000557478 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 C15orf56Q8N910 161 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 NRACQ8N912 160 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
NEDD1-212ENST00000557478 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
NEDD1-212ENST00000557478 C1orf196B1AJZ1 125 aa11.24□□□□□ -0.61
NEDD1-212ENST00000557478 CAMPP49913 170 aa11.24□□□□□ -0.61
NEDD1-212ENST00000557478 FOXI1Q12951 378 aa11.24□□□□□ -0.61
NEDD1-212ENST00000557478 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
NEDD1-212ENST00000557478 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
NEDD1-212ENST00000557478 LINC00474Q9P2X8 69 aa11.24□□□□□ -0.61
NEDD1-212ENST00000557478 KRTAP29-1A8MX34 341 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-212ENST00000557478 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
NEDD1-212ENST00000557478 RPL37AP61513 92 aaKnown RBP11.23□□□□□ -0.61
NEDD1-212ENST00000557478 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
NEDD1-212ENST00000557478 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
NEDD1-212ENST00000557478 FLG2Q5D862 2391 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-212ENST00000557478 XCL1P47992 114 aa11.22□□□□□ -0.61
NEDD1-212ENST00000557478 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
NEDD1-212ENST00000557478 SMKR1H3BMG3 65 aa11.2□□□□□ -0.62
NEDD1-212ENST00000557478 OXTP01178 125 aa11.2□□□□□ -0.62
NEDD1-212ENST00000557478 SPACA4Q8TDM5 124 aa11.2□□□□□ -0.62
NEDD1-212ENST00000557478 UBE2D4Q9Y2X8 147 aa11.2□□□□□ -0.62
NEDD1-212ENST00000557478 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
NEDD1-212ENST00000557478 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
NEDD1-212ENST00000557478 TNFRSF6BO95407 300 aa11.19□□□□□ -0.62
NEDD1-212ENST00000557478 MT-ND4LP03901 98 aa11.19□□□□□ -0.62
NEDD1-212ENST00000557478 SLPIP03973 132 aa11.19□□□□□ -0.62
NEDD1-212ENST00000557478 ANAPC16Q96DE5 110 aa11.19□□□□□ -0.62
NEDD1-212ENST00000557478 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
NEDD1-212ENST00000557478 MALP21145 153 aa11.18□□□□□ -0.62
NEDD1-212ENST00000557478 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
NEDD1-212ENST00000557478 MRPL54Q6P161 138 aaKnown RBP11.18□□□□□ -0.62
NEDD1-212ENST00000557478 ORMDL3Q8N138 153 aa11.18□□□□□ -0.62
NEDD1-212ENST00000557478 SMIM2Q9BVW6 85 aa11.18□□□□□ -0.62
NEDD1-212ENST00000557478 D6R8Y8 96 aa11.17□□□□□ -0.62
NEDD1-212ENST00000557478 COX7A2LO14548 114 aa11.17□□□□□ -0.62
NEDD1-212ENST00000557478 APOMO95445 188 aa11.17□□□□□ -0.62
NEDD1-212ENST00000557478 RAB5AP20339 215 aa11.17□□□□□ -0.62
NEDD1-212ENST00000557478 KRTAP10-4P60372 401 aaPredicted RBP11.17□□□□□ -0.62
NEDD1-212ENST00000557478 C7orf33Q8WU49 177 aa11.17□□□□□ -0.62
NEDD1-212ENST00000557478 SPANXA1Q9NS26 97 aa11.17□□□□□ -0.62
NEDD1-212ENST00000557478 PLAC8Q9NZF1 115 aa11.17□□□□□ -0.62
NEDD1-212ENST00000557478 COX6A2Q02221 97 aa11.16□□□□□ -0.62
NEDD1-212ENST00000557478 A0A087WYN8 130 aa11.15□□□□□ -0.62
NEDD1-212ENST00000557478 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
NEDD1-212ENST00000557478 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
NEDD1-212ENST00000557478 TMEM136Q6ZRR5 245 aa11.14□□□□□ -0.63
NEDD1-212ENST00000557478 F8WDY8 70 aa11.13□□□□□ -0.63
NEDD1-212ENST00000557478 PANO1I0J062 215 aa11.13□□□□□ -0.63
NEDD1-212ENST00000557478 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
NEDD1-212ENST00000557478 TRAV13-1A0A0B4J241 112 aa11.12□□□□□ -0.63
NEDD1-212ENST00000557478 MAJINQ3KP22 176 aa11.12□□□□□ -0.63
NEDD1-212ENST00000557478 CLLU1Q5K131 121 aa11.12□□□□□ -0.63
NEDD1-212ENST00000557478 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
NEDD1-212ENST00000557478 PRELID3AQ96N28 172 aa11.12□□□□□ -0.63
NEDD1-212ENST00000557478 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
NEDD1-212ENST00000557478 K7EMI3 77 aa11.11□□□□□ -0.63
NEDD1-212ENST00000557478 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
NEDD1-212ENST00000557478 Q6ZRU5 148 aa11.11□□□□□ -0.63
NEDD1-212ENST00000557478 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
NEDD1-212ENST00000557478 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
NEDD1-212ENST00000557478 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
NEDD1-212ENST00000557478 NPYP01303 97 aa11.1□□□□□ -0.63
NEDD1-212ENST00000557478 G0S2P27469 103 aa11.1□□□□□ -0.63
NEDD1-212ENST00000557478 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
NEDD1-212ENST00000557478 OR10D4PQ8NGN7 298 aa11.1□□□□□ -0.63
NEDD1-212ENST00000557478 PYGO1Q9Y3Y4 419 aa11.1□□□□□ -0.63
NEDD1-212ENST00000557478 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
NEDD1-212ENST00000557478 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
NEDD1-212ENST00000557478 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
NEDD1-212ENST00000557478 Q6ZUT4 128 aa11.09□□□□□ -0.63
NEDD1-212ENST00000557478 STPG4Q8N801 248 aa11.09□□□□□ -0.63
NEDD1-212ENST00000557478 MAP1LC3AQ9H492 121 aa11.09□□□□□ -0.63
NEDD1-212ENST00000557478 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
NEDD1-212ENST00000557478 NPSP0C0P6 89 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms