RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SUPT4H1P63272 117 aaKnown RBP3.5□□□□□ -1.85
ATXN3-247ENST00000557311 HBG1P69891 147 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 ARL16Q0P5N6 197 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 MRGPRG-AS1Q2M3A8 158 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 SP6Q3SY56 376 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 CLEC19AQ6UXS0 136 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 Q6ZQT7 251 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 OR5C1Q8NGR4 320 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 EEF1AKMT3Q96AZ1 226 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 FAM19A4Q96LR4 140 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 DSCR8Q96T75 97 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 EPDR1Q9UM22 224 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 HERC1Q15751 4861 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 HSPG2P98160 4391 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 TRBV7-1A0A0A6YYK4 115 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 TRBV5-5A0A0J9YX44 114 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 hADV29S1A0JD25 119 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 PGPA6NDG6 321 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 C16orf90A8MZG2 172 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 H3BT86 120 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 H3BVH4 76 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 DEFB4AO15263 64 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 CXCL5P42830 114 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 FXYD2P54710 66 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 ERVK-16P61578 105 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 KLK9Q2XQG4 91 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 UNQ9165/PRO28630Q6UXU0 137 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 Q6ZR54 194 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 PRR15Q8IV56 129 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 RNF182Q8N6D2 247 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 FMC1Q96HJ9 113 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 CYYR1Q96J86 154 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 HDHD3Q9BSH5 251 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-247ENST00000557311 CHAC1Q9BUX1 264 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 NXT2Q9NPJ8 142 aaKnown RBP3.49□□□□□ -1.85
ATXN3-247ENST00000557311 KLK9Q9UKQ9 250 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 TIMM9Q9Y5J7 89 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
ATXN3-247ENST00000557311 DNAH6Q9C0G6 4158 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 PIGBOS1A0A0B4J2F0 54 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 CRYM-AS1A6NIL9 109 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 K7ERJ3 54 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 CST7O76096 145 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 TCL1BO95988 128 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 APOHP02749 345 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-247ENST00000557311 TCRAP04437 139 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 ACYP1P07311 99 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 DUTP33316 252 aaKnown RBP3.48□□□□□ -1.85
ATXN3-247ENST00000557311 HERVK_113P61574 105 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 HBG2P69892 147 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 RPL36AP83881 106 aaKnown RBP3.48□□□□□ -1.85
ATXN3-247ENST00000557311 DAZ2Q13117 558 aaKnown RBP3.48□□□□□ -1.85
ATXN3-247ENST00000557311 ZNF56Q15929 161 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 TMEM170BQ5T4T1 132 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 C1orf134Q5TEV5 83 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 LINC00305Q7Z4B0 112 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 DAZ4Q86SG3 579 aaKnown RBP3.48□□□□□ -1.85
ATXN3-247ENST00000557311 TMEM252Q8N6L7 170 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 IGF2BP2-AS1Q96M15 143 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 ODF3Q96PU9 254 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 SLC25A2Q9BXI2 301 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 DAZ1Q9NQZ3 744 aaKnown RBP3.48□□□□□ -1.85
ATXN3-247ENST00000557311 DAZ3Q9NR90 486 aaKnown RBP3.48□□□□□ -1.85
ATXN3-247ENST00000557311 OTORQ9NRC9 128 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 HHLA3Q9XRX5 114 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 S4R3C0 116 aa3.48□□□□□ -1.85
ATXN3-247ENST00000557311 TRBV19A0A075B6N1 114 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 DEFB131BA0A096LNP1 70 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 K7EMT4 169 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 RBMY1A1P0DJD3 496 aaKnown RBP3.47□□□□□ -1.85
ATXN3-247ENST00000557311 RBMY1CP0DJD4 496 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 DEFA4P12838 97 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 MIFP14174 115 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 MRPS36P82909 103 aaKnown RBP3.47□□□□□ -1.85
ATXN3-247ENST00000557311 RPL18AQ02543 176 aaKnown RBP3.47□□□□□ -1.85
ATXN3-247ENST00000557311 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-247ENST00000557311 RBMY1FQ15415 496 aaKnown RBP3.47□□□□□ -1.85
ATXN3-247ENST00000557311 Q6ZRU5 148 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 Q6ZTC4 211 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 Q8NAQ8 132 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 DPH3P1Q9H4G8 78 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 ANAPC10Q9UM13 185 aa3.47□□□□□ -1.85
ATXN3-247ENST00000557311 IGLV11-55A0A075B6I3 123 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 IGLV2-18A0A075B6J9 118 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 TMSB15BA0A087X1C1 80 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 IGHV3-35A0A0C4DH35 117 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 IGKV1-6A0A0C4DH72 117 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 LOC107984156A0A0G2JMH3 177 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 MYMXA0A1B0GTQ4 84 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 C15orf62A8K5M9 175 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 C9JCJ5 164 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 H3BMM0 161 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 SYNGR2O43760 224 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 PPYP01298 95 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 NPYP01303 97 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms