RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
SYNE2-227ENST00000557307 TSKUQ8WUA8 353 aa6.86□□□□□ -1.31
SYNE2-227ENST00000557307 TMEM191AQ9H0A3 160 aa6.86□□□□□ -1.31
SYNE2-227ENST00000557307 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-227ENST00000557307 A0A1B0GUT8 65 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 H7C423 109 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 MAJINQ3KP22 176 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 NRACQ8N912 160 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 NUP35Q8NFH5 326 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 ISOC2Q96AB3 205 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 ST20Q9HBF5 79 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 OSTCQ9NRP0 149 aa6.85□□□□□ -1.31
SYNE2-227ENST00000557307 LRP2P98164 4655 aa6.84□□□□□ -1.31
SYNE2-227ENST00000557307 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
SYNE2-227ENST00000557307 RPL23P62829 140 aaKnown RBP6.84□□□□□ -1.31
SYNE2-227ENST00000557307 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
SYNE2-227ENST00000557307 TRBV27A0A0K0K1C4 114 aa6.83□□□□□ -1.32
SYNE2-227ENST00000557307 ZNF25P17030 456 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-227ENST00000557307 SERTAD4-AS1Q5TG53 156 aa6.83□□□□□ -1.32
SYNE2-227ENST00000557307 TEX261Q6UWH6 196 aa6.83□□□□□ -1.32
SYNE2-227ENST00000557307 MRPL52Q86TS9 123 aaKnown RBP6.83□□□□□ -1.32
SYNE2-227ENST00000557307 STPG4Q8N801 248 aa6.83□□□□□ -1.32
SYNE2-227ENST00000557307 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
SYNE2-227ENST00000557307 MRAP2Q96G30 205 aa6.83□□□□□ -1.32
SYNE2-227ENST00000557307 PLA2G2DQ9UNK4 145 aa6.83□□□□□ -1.32
SYNE2-227ENST00000557307 PRR3P79522 188 aaKnown RBP6.82□□□□□ -1.32
SYNE2-227ENST00000557307 MRPL51Q4U2R6 128 aaKnown RBP6.82□□□□□ -1.32
SYNE2-227ENST00000557307 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
SYNE2-227ENST00000557307 Q6ZUT4 128 aa6.82□□□□□ -1.32
SYNE2-227ENST00000557307 FAM104AQ969W3 186 aa6.82□□□□□ -1.32
SYNE2-227ENST00000557307 BORCS7Q96B45 105 aa6.82□□□□□ -1.32
SYNE2-227ENST00000557307 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
SYNE2-227ENST00000557307 C7orf77A4D0Y5 90 aa6.81□□□□□ -1.32
SYNE2-227ENST00000557307 ADIRFQ15847 76 aa6.81□□□□□ -1.32
SYNE2-227ENST00000557307 Q6ZRU5 148 aa6.81□□□□□ -1.32
SYNE2-227ENST00000557307 ZNF664Q8N3J9 261 aa6.81□□□□□ -1.32
SYNE2-227ENST00000557307 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
SYNE2-227ENST00000557307 BTF3L4Q96K17 158 aa6.81□□□□□ -1.32
SYNE2-227ENST00000557307 IGHV1-58A0A0C4DH39 117 aa6.8□□□□□ -1.32
SYNE2-227ENST00000557307 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
SYNE2-227ENST00000557307 IGLV4-69A0A075B6H9 119 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 CAMPP49913 170 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 SUMO2P61956 95 aaKnown RBP6.79□□□□□ -1.32
SYNE2-227ENST00000557307 RPL39P62891 51 aaKnown RBP6.79□□□□□ -1.32
SYNE2-227ENST00000557307 RIGQ13278 110 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 TMEM241Q24JQ0 296 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 FAM74A3Q4VXF1 159 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 FAM104BQ5XKR9 115 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 CD164L2Q6UWJ8 174 aa6.79□□□□□ -1.32
SYNE2-227ENST00000557307 FCER1GP30273 86 aa6.78□□□□□ -1.32
SYNE2-227ENST00000557307 SS18Q15532 418 aa6.78□□□□□ -1.32
SYNE2-227ENST00000557307 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
SYNE2-227ENST00000557307 OPRPNQ99935 248 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-227ENST00000557307 NAT8BQ9UHF3 227 aa6.78□□□□□ -1.32
SYNE2-227ENST00000557307 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 A0A0J9YXV3 536 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 VCYO14598 125 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 NPYP01303 97 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 SYCNQ0VAF6 134 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 C5orf38Q86SI9 138 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 C7orf33Q8WU49 177 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 NAT8Q9UHE5 227 aa6.77□□□□□ -1.33
SYNE2-227ENST00000557307 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
SYNE2-227ENST00000557307 A0A1B0GXF2 115 aa6.76□□□□□ -1.33
SYNE2-227ENST00000557307 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
SYNE2-227ENST00000557307 GAGE2BQ13066 116 aa6.76□□□□□ -1.33
SYNE2-227ENST00000557307 D6R8Y8 96 aa6.75□□□□□ -1.33
SYNE2-227ENST00000557307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-227ENST00000557307 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
SYNE2-227ENST00000557307 COX7A2LO14548 114 aa6.75□□□□□ -1.33
SYNE2-227ENST00000557307 TCAPO15273 167 aa6.75□□□□□ -1.33
SYNE2-227ENST00000557307 TNFRSF6BO95407 300 aa6.75□□□□□ -1.33
SYNE2-227ENST00000557307 SMIM2Q9BVW6 85 aa6.75□□□□□ -1.33
SYNE2-227ENST00000557307 CSDC2Q9Y534 153 aaKnown RBP6.75□□□□□ -1.33
SYNE2-227ENST00000557307 TRBV24-1A0A075B6N3 115 aa6.74□□□□□ -1.33
SYNE2-227ENST00000557307 CKS2P33552 79 aa6.74□□□□□ -1.33
SYNE2-227ENST00000557307 LINC01600Q96MT4 127 aa6.74□□□□□ -1.33
SYNE2-227ENST00000557307 LPAP08519 4548 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 LOC107984640A0A0U1RRK4 108 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 C1orf196B1AJZ1 125 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 PPP1R2P9O14990 202 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 MALP21145 153 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 SRSF9Q13242 221 aaKnown RBP eCLIP6.73□□□□□ -1.33
SYNE2-227ENST00000557307 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 KRTAP11-1Q8IUC1 163 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 KIR2DL4Q99706 377 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 TIMM21Q9BVV7 248 aa6.73□□□□□ -1.33
SYNE2-227ENST00000557307 RPL32P62910 135 aaKnown RBP6.72□□□□□ -1.33
SYNE2-227ENST00000557307 HBBP68871 147 aa6.72□□□□□ -1.33
SYNE2-227ENST00000557307 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
SYNE2-227ENST00000557307 PHF5AQ7RTV0 110 aaKnown RBP6.72□□□□□ -1.33
SYNE2-227ENST00000557307 C20orf78Q9BR46 151 aa6.72□□□□□ -1.33
SYNE2-227ENST00000557307 IGHV3OR16-9A0A0B4J2B5 98 aa6.71□□□□□ -1.34
SYNE2-227ENST00000557307 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
SYNE2-227ENST00000557307 LINC00862A6NCI5 91 aa6.71□□□□□ -1.34
SYNE2-227ENST00000557307 APOMO95445 188 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms