RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PPP1R17O96001 155 aa10.64□□□□□ -0.71
VSX1-207ENST00000557285 SLPIP03973 132 aa10.64□□□□□ -0.71
VSX1-207ENST00000557285 CKS2P33552 79 aa10.64□□□□□ -0.71
VSX1-207ENST00000557285 RAB14P61106 215 aa10.64□□□□□ -0.71
VSX1-207ENST00000557285 CNBPP62633 177 aaKnown RBP10.64□□□□□ -0.71
VSX1-207ENST00000557285 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
VSX1-207ENST00000557285 IGHV3-64A0A075B6Q5 118 aa10.63□□□□□ -0.71
VSX1-207ENST00000557285 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.63□□□□□ -0.71
VSX1-207ENST00000557285 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
VSX1-207ENST00000557285 CCL25O15444 150 aa10.63□□□□□ -0.71
VSX1-207ENST00000557285 HBBP68871 147 aa10.63□□□□□ -0.71
VSX1-207ENST00000557285 SDIM1Q6ZPB5 146 aa10.63□□□□□ -0.71
VSX1-207ENST00000557285 DPH3Q96FX2 82 aa10.63□□□□□ -0.71
VSX1-207ENST00000557285 KIR2DL4Q99706 377 aa10.63□□□□□ -0.71
VSX1-207ENST00000557285 HERC1Q15751 4861 aa10.62□□□□□ -0.71
VSX1-207ENST00000557285 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
VSX1-207ENST00000557285 A0A1B0GW15 77 aa10.62□□□□□ -0.71
VSX1-207ENST00000557285 CHTF8P0CG12 524 aa10.62□□□□□ -0.71
VSX1-207ENST00000557285 FOXI1Q12951 378 aa10.62□□□□□ -0.71
VSX1-207ENST00000557285 RNASE13Q5GAN3 156 aaKnown RBP10.62□□□□□ -0.71
VSX1-207ENST00000557285 D6R8Y8 96 aa10.61□□□□□ -0.71
VSX1-207ENST00000557285 F8W036 122 aa10.61□□□□□ -0.71
VSX1-207ENST00000557285 PPP1R2P9O14990 202 aa10.61□□□□□ -0.71
VSX1-207ENST00000557285 SS18Q15532 418 aa10.61□□□□□ -0.71
VSX1-207ENST00000557285 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
VSX1-207ENST00000557285 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
VSX1-207ENST00000557285 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
VSX1-207ENST00000557285 S100A8P05109 93 aa10.6□□□□□ -0.71
VSX1-207ENST00000557285 A0A1B0GXF2 115 aa10.59□□□□□ -0.71
VSX1-207ENST00000557285 TNFRSF6BO95407 300 aa10.59□□□□□ -0.71
VSX1-207ENST00000557285 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
VSX1-207ENST00000557285 LINC00862A6NCI5 91 aa10.58□□□□□ -0.72
VSX1-207ENST00000557285 J3QL48 77 aa10.58□□□□□ -0.72
VSX1-207ENST00000557285 RPL37AP61513 92 aaKnown RBP10.58□□□□□ -0.72
VSX1-207ENST00000557285 C20orf78Q9BR46 151 aa10.58□□□□□ -0.72
VSX1-207ENST00000557285 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
VSX1-207ENST00000557285 GVQW2A0A096LPI5 108 aaPredicted RBP10.57□□□□□ -0.72
VSX1-207ENST00000557285 TRAV13-1A0A0B4J241 112 aa10.57□□□□□ -0.72
VSX1-207ENST00000557285 NPYP01303 97 aa10.57□□□□□ -0.72
VSX1-207ENST00000557285 COX6A2Q02221 97 aa10.57□□□□□ -0.72
VSX1-207ENST00000557285 Q6ZUT4 128 aa10.57□□□□□ -0.72
VSX1-207ENST00000557285 SMIM2Q9BVW6 85 aa10.57□□□□□ -0.72
VSX1-207ENST00000557285 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
VSX1-207ENST00000557285 IGKV2-24A0A0C4DH68 120 aa10.56□□□□□ -0.72
VSX1-207ENST00000557285 TCAPO15273 167 aa10.56□□□□□ -0.72
VSX1-207ENST00000557285 KRTAP10-4P60372 401 aaPredicted RBP10.56□□□□□ -0.72
VSX1-207ENST00000557285 RPL39P62891 51 aaKnown RBP10.56□□□□□ -0.72
VSX1-207ENST00000557285 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
VSX1-207ENST00000557285 TMEM18Q96B42 140 aa10.56□□□□□ -0.72
VSX1-207ENST00000557285 IGHV1-58A0A0C4DH39 117 aa10.55□□□□□ -0.72
VSX1-207ENST00000557285 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
VSX1-207ENST00000557285 CD164L2Q6UWJ8 174 aa10.55□□□□□ -0.72
VSX1-207ENST00000557285 A0A087WYN8 130 aa10.54□□□□□ -0.72
VSX1-207ENST00000557285 PNRC1Q12796 327 aaPredicted RBP10.54□□□□□ -0.72
VSX1-207ENST00000557285 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
VSX1-207ENST00000557285 ORMDL3Q8N138 153 aa10.54□□□□□ -0.72
VSX1-207ENST00000557285 PRSS3P2Q8NHM4 247 aa10.54□□□□□ -0.72
VSX1-207ENST00000557285 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
VSX1-207ENST00000557285 C1orf196B1AJZ1 125 aa10.53□□□□□ -0.72
VSX1-207ENST00000557285 MALP21145 153 aa10.53□□□□□ -0.72
VSX1-207ENST00000557285 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
VSX1-207ENST00000557285 MAJINQ3KP22 176 aa10.53□□□□□ -0.72
VSX1-207ENST00000557285 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
VSX1-207ENST00000557285 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
VSX1-207ENST00000557285 CSDC2Q9Y534 153 aaKnown RBP10.53□□□□□ -0.72
VSX1-207ENST00000557285 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.73
VSX1-207ENST00000557285 COX7A2LO14548 114 aa10.52□□□□□ -0.73
VSX1-207ENST00000557285 PPBPP02775 128 aa10.52□□□□□ -0.73
VSX1-207ENST00000557285 RPL32P62910 135 aaKnown RBP10.52□□□□□ -0.73
VSX1-207ENST00000557285 CLLU1Q5K131 121 aa10.52□□□□□ -0.73
VSX1-207ENST00000557285 ANAPC16Q96DE5 110 aa10.52□□□□□ -0.73
VSX1-207ENST00000557285 CARD19Q96LW7 228 aa10.52□□□□□ -0.73
VSX1-207ENST00000557285 OPRPNQ99935 248 aaPredicted RBP10.52□□□□□ -0.73
VSX1-207ENST00000557285 LOC389332A0A1B0GUA5 103 aa10.51□□□□□ -0.73
VSX1-207ENST00000557285 RAB5AP20339 215 aa10.51□□□□□ -0.73
VSX1-207ENST00000557285 C5orf38Q86SI9 138 aa10.51□□□□□ -0.73
VSX1-207ENST00000557285 TIMM21Q9BVV7 248 aa10.51□□□□□ -0.73
VSX1-207ENST00000557285 PKHD1L1Q86WI1 4243 aa10.5□□□□□ -0.73
VSX1-207ENST00000557285 PHOX2AO14813 284 aa10.5□□□□□ -0.73
VSX1-207ENST00000557285 A0A096LNI7 61 aa10.49□□□□□ -0.73
VSX1-207ENST00000557285 HNRNPA3P51991 378 aaKnown RBP10.49□□□□□ -0.73
VSX1-207ENST00000557285 SYCNQ0VAF6 134 aa10.49□□□□□ -0.73
VSX1-207ENST00000557285 SPANXA1Q9NS26 97 aa10.49□□□□□ -0.73
VSX1-207ENST00000557285 IGLV4-69A0A075B6H9 119 aa10.48□□□□□ -0.73
VSX1-207ENST00000557285 IFITM2Q01629 132 aa10.48□□□□□ -0.73
VSX1-207ENST00000557285 STPG4Q8N801 248 aa10.48□□□□□ -0.73
VSX1-207ENST00000557285 MAP1LC3AQ9H492 121 aa10.48□□□□□ -0.73
VSX1-207ENST00000557285 LRP1Q07954 4544 aaKnown RBP10.47□□□□□ -0.73
VSX1-207ENST00000557285 IFITM10A6NMD0 228 aa10.47□□□□□ -0.73
VSX1-207ENST00000557285 KRTAP29-1A8MX34 341 aaPredicted RBP10.47□□□□□ -0.73
VSX1-207ENST00000557285 ADCYAP1P18509 176 aa10.47□□□□□ -0.73
VSX1-207ENST00000557285 PLAC8Q9NZF1 115 aa10.47□□□□□ -0.73
VSX1-207ENST00000557285 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
VSX1-207ENST00000557285 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
VSX1-207ENST00000557285 Q6ZRU5 148 aa10.45□□□□□ -0.74
VSX1-207ENST00000557285 C7orf33Q8WU49 177 aa10.45□□□□□ -0.74
VSX1-207ENST00000557285 CAMK2N2Q96S95 79 aa10.45□□□□□ -0.74
VSX1-207ENST00000557285 TMEM218A2RU14 115 aa10.44□□□□□ -0.74
VSX1-207ENST00000557285 APOMO95445 188 aa10.44□□□□□ -0.74
VSX1-207ENST00000557285 IFI27P40305 119 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms