RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 TMBIM6P55061 237 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 COTL1Q14019 142 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 KRTAP11-1Q8IUC1 163 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 ISOC2Q96AB3 205 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 LINC00526Q96FQ7 95 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 SDHCQ99643 169 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-223ENST00000557076 WDR61Q9GZS3 305 aaKnown RBP2.7□□□□□ -1.98
SCFD1-223ENST00000557076 PPDPFQ9H3Y8 114 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 CBY1Q9Y3M2 126 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 PYGO1Q9Y3Y4 419 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 A0A1W2PPV4 95 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 GRIFINA4D1Z8 144 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 H0Y8G0 127 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 M0QY20 66 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 ZNF861PO60384 105 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 ATP6V1G1O75348 118 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 APOMO95445 188 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 STAG3L3P0CL85 134 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 TAGLN2P37802 199 aaKnown RBP2.69□□□□□ -1.98
SCFD1-223ENST00000557076 MT1HP80294 61 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 ZNF56Q15929 161 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 EIF5AL1Q6IS14 154 aaKnown RBP2.69□□□□□ -1.98
SCFD1-223ENST00000557076 LINC00173Q6ZV60 143 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 NUP35Q8NFH5 326 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 TYMSOSQ8TAI1 123 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 OPRPNQ99935 248 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-223ENST00000557076 RETNLBQ9BQ08 111 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 NAA50Q9GZZ1 169 aaKnown RBP2.69□□□□□ -1.98
SCFD1-223ENST00000557076 FLVCR2Q9UPI3 526 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
SCFD1-223ENST00000557076 IGLV4-69A0A075B6H9 119 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 A0A087X002 238 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 IGKV3OR2-268A0A0C4DH90 116 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 NAP1L6A6NFF2 107 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-223ENST00000557076 M0R036 132 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 UBE2L6O14933 153 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 SSTP61278 116 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 MEF2BQ02080 365 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-223ENST00000557076 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 PYDC2Q56P42 97 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 LINC00337Q8N6G1 96 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 PGLYRP4Q96LB8 373 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 ZNF471Q9BX82 626 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-223ENST00000557076 WFDC1Q9HC57 220 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 NUDT15Q9NV35 164 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 ZFP30Q9Y2G7 519 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 ARL2-SNX15V9GYD0 113 aa2.68□□□□□ -1.98
SCFD1-223ENST00000557076 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-223ENST00000557076 H7C423 109 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 SH2D1AO60880 128 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 BCL2P10415 239 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 ESDP10768 282 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 XCL1P47992 114 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 HERV-K104P63124 156 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 CNPY1Q3B7I2 92 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 ADAMTSL4-AS1Q5T5F5 129 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 CD164L2Q6UWJ8 174 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 OR5A1Q8NGJ0 315 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 TPPP3Q9BW30 176 aa2.67□□□□□ -1.98
SCFD1-223ENST00000557076 LINC00959A0A1B0GUT2 108 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 A0A1W2PRE2 83 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 C19orf71A6NCJ1 209 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 SNAI2O43623 268 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 CXCL1P09341 107 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 OR5AL1P0C617 328 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 ARL14EPLP0DKL9 152 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 SMIM17P0DL12 118 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 GCHFRP30047 84 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 Q6ZVQ6 151 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 FP248Q71RG6 208 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-223ENST00000557076 OR10AG1Q8NH19 301 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 SCGB1C1Q8TD33 95 aa2.66□□□□□ -1.98
SCFD1-223ENST00000557076 USH2AO75445 5202 aa2.65□□□□□ -1.98
SCFD1-223ENST00000557076 TMSB15BA0A087X1C1 80 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 A0A0U1RRA0 63 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 FAM168BA1KXE4 195 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 F8WDY8 70 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 HMGB3O15347 200 aaKnown RBP2.65□□□□□ -1.99
SCFD1-223ENST00000557076 CCL25O15444 150 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 STAG3L2P0CL84 134 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 NKX2-5P52952 324 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-223ENST00000557076 RPL18AQ02543 176 aaKnown RBP2.65□□□□□ -1.99
SCFD1-223ENST00000557076 TMEM241Q24JQ0 296 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 SPANXN1Q5VSR9 72 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 AMMECR1LQ6DCA0 310 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 RASL11AQ6T310 242 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 LINC00304Q8N9R0 145 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 HIST1H2BAQ96A08 127 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 CAMK2N2Q96S95 79 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 IMMP2LQ96T52 175 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 NKX6-2Q9C056 277 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-223ENST00000557076 NIT2Q9NQR4 276 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 TMEM167BQ9NRX6 74 aa2.65□□□□□ -1.99
SCFD1-223ENST00000557076 CENPXA8MT69 81 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 BCL2L11O43521 198 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 ZNF25P17030 456 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 397.8 ms