RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 IFITM1P13164 125 aa8.22□□□□□ -1.09
SRP54-213ENST00000556994 LINC01356Q8N9X3 169 aa8.22□□□□□ -1.09
SRP54-213ENST00000556994 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
SRP54-213ENST00000556994 Q9H8V8 135 aa8.22□□□□□ -1.09
SRP54-213ENST00000556994 VPREB3Q9UKI3 123 aa8.22□□□□□ -1.09
SRP54-213ENST00000556994 MYO18BQ8IUG5 2567 aa8.22□□□□□ -1.09
SRP54-213ENST00000556994 ACACBO00763 2458 aa8.22□□□□□ -1.09
SRP54-213ENST00000556994 IGHV3-53P01767 116 aa8.21□□□□□ -1.09
SRP54-213ENST00000556994 C11orf72Q8NBR9 251 aa8.21□□□□□ -1.09
SRP54-213ENST00000556994 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.09
SRP54-213ENST00000556994 WNK1Q9H4A3 2382 aa8.21□□□□□ -1.09
SRP54-213ENST00000556994 H3BT86 120 aa8.21□□□□□ -1.1
SRP54-213ENST00000556994 LINC00694P0DN24 101 aa8.21□□□□□ -1.1
SRP54-213ENST00000556994 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
SRP54-213ENST00000556994 NDUFA1O15239 70 aa8.2□□□□□ -1.1
SRP54-213ENST00000556994 MAP6D1Q9H9H5 199 aa8.2□□□□□ -1.1
SRP54-213ENST00000556994 XCL2Q9UBD3 114 aa8.2□□□□□ -1.1
SRP54-213ENST00000556994 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
SRP54-213ENST00000556994 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
SRP54-213ENST00000556994 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
SRP54-213ENST00000556994 Q8N2B8 174 aa8.19□□□□□ -1.1
SRP54-213ENST00000556994 A8MTW9 85 aa8.19□□□□□ -1.1
SRP54-213ENST00000556994 TIMM17BO60830 172 aa8.19□□□□□ -1.1
SRP54-213ENST00000556994 TIRAPP58753 221 aa8.19□□□□□ -1.1
SRP54-213ENST00000556994 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
SRP54-213ENST00000556994 SOSTDC1Q6X4U4 206 aa8.19□□□□□ -1.1
SRP54-213ENST00000556994 NIPBLQ6KC79 2804 aaeCLIP8.18□□□□□ -1.1
SRP54-213ENST00000556994 IGSF10Q6WRI0 2623 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 DYNLRB2Q8TF09 96 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 DNAJC30Q96LL9 226 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 FAM208BQ5VWN6 2430 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 IGLV5-45A0A087WSX0 123 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 GAGE12JA6NER3 117 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 RS1O15537 224 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 GAGE7O76087 117 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 GAGE4Q13068 117 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 BEAN1Q3B7T3 259 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 Q6YL49 198 aa8.18□□□□□ -1.1
SRP54-213ENST00000556994 TLN2Q9Y4G6 2542 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 ZNF469Q96JG9 3925 aaPredicted RBP8.17□□□□□ -1.1
SRP54-213ENST00000556994 NBPF19A0A087WUL8 3843 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 TRGV1A0A0A0MS02 117 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 INSP01308 110 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 Q6Q795 121 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 A0A096LNT2 108 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 PIK3CD-AS1Q5SR53 167 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 NF1P21359 2839 aa8.17□□□□□ -1.1
SRP54-213ENST00000556994 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
SRP54-213ENST00000556994 HERVK_113P63121 156 aa8.16□□□□□ -1.1
SRP54-213ENST00000556994 PRIMA1Q86XR5 153 aa8.16□□□□□ -1.1
SRP54-213ENST00000556994 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
SRP54-213ENST00000556994 IGLV5-39A0A0G2JS06 123 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 CHCHD5Q9BSY4 110 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 PEMTQ9UBM1 199 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 USP24Q9UPU5 2620 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 DSCR9P59020 149 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 DEFB114Q30KQ6 69 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.1
SRP54-213ENST00000556994 ABCA12Q86UK0 2595 aa8.15□□□□□ -1.11
SRP54-213ENST00000556994 C11orf44Q8N8P7 122 aa8.14□□□□□ -1.11
SRP54-213ENST00000556994 SVIPQ8NHG7 77 aa8.14□□□□□ -1.11
SRP54-213ENST00000556994 J3QLI3 93 aa8.14□□□□□ -1.11
SRP54-213ENST00000556994 COX7A2LO14548 114 aa8.14□□□□□ -1.11
SRP54-213ENST00000556994 Q6ZTI0 123 aa8.14□□□□□ -1.11
SRP54-213ENST00000556994 C1orf158Q8N1D5 194 aa8.14□□□□□ -1.11
SRP54-213ENST00000556994 PTPN13Q12923 2485 aa8.14□□□□□ -1.11
SRP54-213ENST00000556994 JMJD1CQ15652 2540 aa8.13□□□□□ -1.11
SRP54-213ENST00000556994 SETD2Q9BYW2 2564 aaPredicted RBP8.13□□□□□ -1.11
SRP54-213ENST00000556994 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
SRP54-213ENST00000556994 Q96MF0 132 aa8.13□□□□□ -1.11
SRP54-213ENST00000556994 SONP18583 2426 aaKnown RBP8.13□□□□□ -1.11
SRP54-213ENST00000556994 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 RPL36AP83881 106 aaKnown RBP8.12□□□□□ -1.11
SRP54-213ENST00000556994 DAZ2Q13117 558 aaKnown RBP8.12□□□□□ -1.11
SRP54-213ENST00000556994 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
SRP54-213ENST00000556994 STHQ8IWL8 128 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 C3orf56Q8N813 242 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 RPL36ALQ969Q0 106 aaKnown RBP8.12□□□□□ -1.11
SRP54-213ENST00000556994 FAM218AQ96MZ4 157 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
SRP54-213ENST00000556994 LRRK2Q5S007 2527 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 K7EQD1 137 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 IGHV4-31P0DP07 118 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 C4orf3Q8WVX3 66 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 CDC42SE2Q9NRR3 84 aa8.12□□□□□ -1.11
SRP54-213ENST00000556994 IGKV3OR2-268A0A0C4DH90 116 aa8.11□□□□□ -1.11
SRP54-213ENST00000556994 A0A1W2PRX2 142 aa8.11□□□□□ -1.11
SRP54-213ENST00000556994 F5H768 121 aa8.11□□□□□ -1.11
SRP54-213ENST00000556994 FSHBP01225 129 aa8.11□□□□□ -1.11
SRP54-213ENST00000556994 MRPL23Q16540 153 aaKnown RBP8.11□□□□□ -1.11
SRP54-213ENST00000556994 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
SRP54-213ENST00000556994 BAALC-AS2P0C853 105 aa8.11□□□□□ -1.11
SRP54-213ENST00000556994 Q9HAA7 133 aa8.11□□□□□ -1.11
SRP54-213ENST00000556994 NAV2Q8IVL1 2488 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms