RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 C20orf78Q9BR46 151 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 APLNQ9ULZ1 77 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 ICOSQ9Y6W8 199 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 VPS13DQ5THJ4 4388 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 A0A096LNJ9 63 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 TRBV27A0A0K0K1C4 114 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 LINC00614P0C842 121 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
ATXN3-244ENST00000556898 RPL39P62891 51 aaKnown RBP3.63□□□□□ -1.83
ATXN3-244ENST00000556898 GAGE6Q13070 117 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 MRPL23Q16540 153 aaKnown RBP3.63□□□□□ -1.83
ATXN3-244ENST00000556898 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 LYPD5Q6UWN5 251 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 LINC00173Q6ZV60 143 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 FA2HQ7L5A8 372 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 CHCHD7Q9BUK0 85 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 LAMTOR2Q9Y2Q5 125 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 FRAS1Q86XX4 4008 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 DNAH10Q8IVF4 4471 aa3.63□□□□□ -1.83
ATXN3-244ENST00000556898 IGHV1-24A0A0C4DH33 117 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 IFITM10A6NMD0 228 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 PPP1R17O96001 155 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 ESDP10768 282 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 FCER1GP30273 86 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 AMTP48728 403 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 RPL32P62910 135 aaKnown RBP3.62□□□□□ -1.83
ATXN3-244ENST00000556898 LAGE3Q14657 143 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 WFDC10BQ8IUB3 73 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 OPRPNQ99935 248 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-244ENST00000556898 GTSF1LQ9H1H1 148 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 LINC00588Q9Y4M8 146 aa3.62□□□□□ -1.83
ATXN3-244ENST00000556898 TRBV6-8A0A0A6YYG3 113 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 LINC01546A6NGU7 62 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 C5orf52A6NGY3 159 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 H3BNG1 76 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 PRYO14603 147 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 HSBP1O75506 76 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 FABP4P15090 132 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 COTL1Q14019 142 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 RNASE13Q5GAN3 156 aaKnown RBP3.61□□□□□ -1.83
ATXN3-244ENST00000556898 COA6Q5JTJ3 125 aaKnown RBP3.61□□□□□ -1.83
ATXN3-244ENST00000556898 LINC00336Q6ZUF6 198 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 DAZ4Q86SG3 579 aaKnown RBP3.61□□□□□ -1.83
ATXN3-244ENST00000556898 HIST3H2BBQ8N257 126 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 KIR2DL4Q99706 377 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 NXT2Q9NPJ8 142 aaKnown RBP3.61□□□□□ -1.83
ATXN3-244ENST00000556898 DAZ3Q9NR90 486 aaKnown RBP3.61□□□□□ -1.83
ATXN3-244ENST00000556898 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
ATXN3-244ENST00000556898 TRBV25-1A0A075B6N4 114 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 IGHV3-30P01768 117 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 IGHV3-33P01772 117 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 S100A6P06703 90 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 IGHV3-30-3P0DP02 117 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 IGHV3-30-5P0DP03 117 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 ORMDL2Q53FV1 153 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 LELP1Q5T871 98 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-244ENST00000556898 C2orf66Q6UXQ4 117 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 SPATA12Q7Z6I5 190 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 Q8N976 141 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 C15orf53Q8NAA6 179 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 C20orf203Q8NBC4 194 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 CHCHD1Q96BP2 118 aaKnown RBP3.6□□□□□ -1.83
ATXN3-244ENST00000556898 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 TMEM243Q9BU79 118 aa3.6□□□□□ -1.83
ATXN3-244ENST00000556898 IGLV4-60A0A075B6I1 120 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 A0A1B0GVY2 172 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 TMEM262E9PQX1 116 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 HBDP02042 147 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 FGF6P10767 208 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 TCTAP57738 103 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 MPV17L2Q567V2 206 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 CLPSL2Q6UWE3 100 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 Q6ZUT4 128 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 TOMM6Q96B49 74 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 HIST1H2BLQ99880 126 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 UBE2D4Q9Y2X8 147 aa3.59□□□□□ -1.83
ATXN3-244ENST00000556898 DNAH6Q9C0G6 4158 aa3.59□□□□□ -1.84
ATXN3-244ENST00000556898 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 IGIPA6NJ69 53 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 H0Y8G0 127 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 UBE2L6O14933 153 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 CCL18P55774 89 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 RBX1P62877 108 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 UBE2DNLQ8IWF7 75 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 SCGB3A1Q96QR1 104 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 CYSLTR1Q9Y271 337 aa3.58□□□□□ -1.84
ATXN3-244ENST00000556898 MRPS16Q9Y3D3 137 aaKnown RBP3.58□□□□□ -1.84
ATXN3-244ENST00000556898 DNAH2Q9P225 4427 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 TRAV8-6A0A0B4J262 113 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 LOC105371267A0A1B0GV96 52 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 K7EMI3 77 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 LEPROTL1O95214 131 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 C3orf79P0CE67 100 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 S100A2P29034 98 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms