RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 Q8N8P6 123 aa6.85□□□□□ -1.31
SHMT2-224ENST00000556737 KIR2DL4Q99706 377 aa6.85□□□□□ -1.31
SHMT2-224ENST00000556737 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
SHMT2-224ENST00000556737 TRBV6-8A0A0A6YYG3 113 aa6.84□□□□□ -1.31
SHMT2-224ENST00000556737 TRAV8-3A0A0A6YYJ7 113 aa6.84□□□□□ -1.31
SHMT2-224ENST00000556737 VCYO14598 125 aa6.84□□□□□ -1.31
SHMT2-224ENST00000556737 TCAPO15273 167 aa6.84□□□□□ -1.31
SHMT2-224ENST00000556737 AMTP48728 403 aa6.84□□□□□ -1.31
SHMT2-224ENST00000556737 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
SHMT2-224ENST00000556737 CHCHD1Q96BP2 118 aaKnown RBP6.84□□□□□ -1.31
SHMT2-224ENST00000556737 TMEM70Q9BUB7 260 aa6.84□□□□□ -1.31
SHMT2-224ENST00000556737 CHCHD7Q9BUK0 85 aa6.84□□□□□ -1.31
SHMT2-224ENST00000556737 TRBV6-5A0A0K0K1A5 114 aa6.83□□□□□ -1.32
SHMT2-224ENST00000556737 I3L3M4 83 aa6.83□□□□□ -1.32
SHMT2-224ENST00000556737 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
SHMT2-224ENST00000556737 NTM-AS1Q6ZSK4 140 aa6.83□□□□□ -1.32
SHMT2-224ENST00000556737 TM2D2Q9BX73 214 aa6.83□□□□□ -1.32
SHMT2-224ENST00000556737 IGLV5-52A0A0A0MRZ9 124 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 NUPR1O60356 82 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 GCSHP23434 173 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 COTL1Q14019 142 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 MPV17L2Q567V2 206 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 COA6Q5JTJ3 125 aaKnown RBP6.82□□□□□ -1.32
SHMT2-224ENST00000556737 FAM19A2Q8N3H0 131 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 KLK12Q9UKR0 248 aa6.82□□□□□ -1.32
SHMT2-224ENST00000556737 A0A087WX48 190 aa6.81□□□□□ -1.32
SHMT2-224ENST00000556737 LECT2O14960 151 aa6.81□□□□□ -1.32
SHMT2-224ENST00000556737 FABP4P15090 132 aa6.81□□□□□ -1.32
SHMT2-224ENST00000556737 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
SHMT2-224ENST00000556737 RPL32P62910 135 aaKnown RBP6.81□□□□□ -1.32
SHMT2-224ENST00000556737 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
SHMT2-224ENST00000556737 HIST3H2BBQ8N257 126 aa6.81□□□□□ -1.32
SHMT2-224ENST00000556737 TMEM18Q96B42 140 aa6.81□□□□□ -1.32
SHMT2-224ENST00000556737 URB1-AS1Q96HZ7 61 aa6.81□□□□□ -1.32
SHMT2-224ENST00000556737 IGHV1-24A0A0C4DH33 117 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 PRSS47A8MTI9 375 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 HBDP02042 147 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 LINC00310P59036 64 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 HAMPP81172 84 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 ENHOQ6UWT2 76 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 UBE2WQ96B02 151 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 CHCHD5Q9BSY4 110 aa6.8□□□□□ -1.32
SHMT2-224ENST00000556737 TRBV25-1A0A075B6N4 114 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 IGKV2D-24A0A075B6R9 120 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 TMEM262E9PQX1 116 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 K7EMI3 77 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 TSHBP01222 138 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 AKR1D1P51857 326 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 TMEM97Q5BJF2 176 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 Q8N976 141 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 BAALCQ8WXS3 180 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 RMI2Q96E14 147 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 COX11Q9Y6N1 276 aa6.79□□□□□ -1.32
SHMT2-224ENST00000556737 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 UBE2L6O14933 153 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 ESDP10768 282 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 G0S2P27469 103 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 Q6ZSA8 131 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 PRR34Q9NV39 138 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 CYSLTR1Q9Y271 337 aa6.78□□□□□ -1.32
SHMT2-224ENST00000556737 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
SHMT2-224ENST00000556737 H0Y8G0 127 aa6.77□□□□□ -1.33
SHMT2-224ENST00000556737 PKIAP61925 76 aa6.77□□□□□ -1.33
SHMT2-224ENST00000556737 RBX1P62877 108 aa6.77□□□□□ -1.33
SHMT2-224ENST00000556737 GAGE6Q13070 117 aa6.77□□□□□ -1.33
SHMT2-224ENST00000556737 C2orf66Q6UXQ4 117 aa6.77□□□□□ -1.33
SHMT2-224ENST00000556737 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
SHMT2-224ENST00000556737 HIST1H2BLQ99880 126 aa6.77□□□□□ -1.33
SHMT2-224ENST00000556737 HSPB8Q9UJY1 196 aa6.77□□□□□ -1.33
SHMT2-224ENST00000556737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.76□□□□□ -1.33
SHMT2-224ENST00000556737 IGKV2-29A2NJV5 120 aaPredicted RBP6.76□□□□□ -1.33
SHMT2-224ENST00000556737 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 CRPP02741 224 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
SHMT2-224ENST00000556737 KRTDAPP60985 99 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 Q5VSD8 79 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 KRTAP26-1Q6PEX3 210 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 OR10D4PQ8NGN7 298 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 SCGB3A1Q96QR1 104 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 TMEM243Q9BU79 118 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 HERC1Q15751 4861 aa6.76□□□□□ -1.33
SHMT2-224ENST00000556737 IFITM10A6NMD0 228 aa6.75□□□□□ -1.33
SHMT2-224ENST00000556737 RPL39P62891 51 aaKnown RBP6.75□□□□□ -1.33
SHMT2-224ENST00000556737 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
SHMT2-224ENST00000556737 AMMECR1LQ6DCA0 310 aa6.75□□□□□ -1.33
SHMT2-224ENST00000556737 CLPSL2Q6UWE3 100 aa6.75□□□□□ -1.33
SHMT2-224ENST00000556737 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
SHMT2-224ENST00000556737 MAP1LC3CQ9BXW4 147 aa6.75□□□□□ -1.33
SHMT2-224ENST00000556737 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 A0A096LNJ9 63 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 ATP5LO75964 103 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
SHMT2-224ENST00000556737 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 MIAQ16674 131 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 DGAT2L7PQ6IED9 249 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms