RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 RNASEKQ6P5S7 137 aaKnown RBP6.6□□□□□ -1.35
SYNE2-221ENST00000556342 LYZL1Q6UWQ5 148 aa6.6□□□□□ -1.35
SYNE2-221ENST00000556342 CARD19Q96LW7 228 aa6.6□□□□□ -1.35
SYNE2-221ENST00000556342 FAM210AQ96ND0 272 aa6.6□□□□□ -1.35
SYNE2-221ENST00000556342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-221ENST00000556342 IGKV2-29A2NJV5 120 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-221ENST00000556342 H7C423 109 aa6.59□□□□□ -1.35
SYNE2-221ENST00000556342 ATP6V1G1O75348 118 aa6.59□□□□□ -1.35
SYNE2-221ENST00000556342 IFNA1P01562 189 aa6.59□□□□□ -1.35
SYNE2-221ENST00000556342 FGF6P10767 208 aa6.59□□□□□ -1.35
SYNE2-221ENST00000556342 GATD1Q8NB37 220 aa6.59□□□□□ -1.35
SYNE2-221ENST00000556342 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
SYNE2-221ENST00000556342 TRAV26-2A0A0B4J265 109 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 NCR2O95944 276 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 APCSP02743 223 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 CTRLP40313 264 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 XCL1P47992 114 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 C9orf62Q8N4C0 152 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 OR5A1Q8NGJ0 315 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 SMIM12Q96EX1 92 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 MANBALQ9NQG1 85 aa6.58□□□□□ -1.36
SYNE2-221ENST00000556342 RAB19A4D1S5 217 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 FAM231BA6NCW3 169 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 CCL25O15444 150 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 ZNF25P17030 456 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-221ENST00000556342 CCL20P78556 96 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 SYCNQ0VAF6 134 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 ZNF345Q14585 488 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 TWIST1Q15672 202 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 RPL39LQ96EH5 51 aaKnown RBP6.57□□□□□ -1.36
SYNE2-221ENST00000556342 CNFNQ9BYD5 112 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 GNG13Q9P2W3 67 aa6.57□□□□□ -1.36
SYNE2-221ENST00000556342 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
SYNE2-221ENST00000556342 SMLR1H3BR10 107 aa6.56□□□□□ -1.36
SYNE2-221ENST00000556342 GNG4P50150 75 aa6.56□□□□□ -1.36
SYNE2-221ENST00000556342 TRBV20OR9-2A0A075B6H5 130 aa6.55□□□□□ -1.36
SYNE2-221ENST00000556342 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
SYNE2-221ENST00000556342 BTF3L4Q96K17 158 aa6.55□□□□□ -1.36
SYNE2-221ENST00000556342 TRAV1-1A0A0B4J248 108 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 CAMPP49913 170 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 GAGE2BQ13066 116 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 CD164L2Q6UWJ8 174 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 ZNF664Q8N3J9 261 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 TMEM101Q96IK0 257 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 BIN3Q9NQY0 253 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
SYNE2-221ENST00000556342 KANTRA0A1W2PQU2 76 aa6.53□□□□□ -1.36
SYNE2-221ENST00000556342 BCL2L11O43521 198 aa6.53□□□□□ -1.36
SYNE2-221ENST00000556342 MT-ND6P03923 174 aa6.53□□□□□ -1.36
SYNE2-221ENST00000556342 ESDP10768 282 aa6.53□□□□□ -1.36
SYNE2-221ENST00000556342 SS18Q15532 418 aa6.53□□□□□ -1.36
SYNE2-221ENST00000556342 TEX261Q6UWH6 196 aa6.53□□□□□ -1.36
SYNE2-221ENST00000556342 MUC2Q02817 5179 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 IGLV4-69A0A075B6H9 119 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 I3L3M4 83 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 PDE6DO43924 150 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 BCL2P10415 239 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 PMCHP20382 165 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 FOXA3P55318 350 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-221ENST00000556342 EIF5AP63241 154 aaKnown RBP6.52□□□□□ -1.37
SYNE2-221ENST00000556342 MEF2BQ02080 365 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-221ENST00000556342 NDUFA5Q16718 116 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 SMIM15Q7Z3B0 74 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 ISOC2Q96AB3 205 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.37
SYNE2-221ENST00000556342 MED9Q9NWA0 146 aa6.52□□□□□ -1.37
SYNE2-221ENST00000556342 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 HMSDA8MTL9 139 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 APOMO95445 188 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 TSHBP01222 138 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-221ENST00000556342 C1orf137Q5JT78 98 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 EIF5AL1Q6IS14 154 aaKnown RBP6.51□□□□□ -1.37
SYNE2-221ENST00000556342 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
SYNE2-221ENST00000556342 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 NUP35Q8NFH5 326 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 RNASE7Q9H1E1 156 aaKnown RBP6.51□□□□□ -1.37
SYNE2-221ENST00000556342 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 TMEM242Q9NWH2 141 aa6.51□□□□□ -1.37
SYNE2-221ENST00000556342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-221ENST00000556342 TEX46H3BTG2 121 aa6.5□□□□□ -1.37
SYNE2-221ENST00000556342 MALP21145 153 aa6.5□□□□□ -1.37
SYNE2-221ENST00000556342 PHF5AQ7RTV0 110 aaKnown RBP6.5□□□□□ -1.37
SYNE2-221ENST00000556342 SLC7A5P1Q8MH63 180 aa6.5□□□□□ -1.37
SYNE2-221ENST00000556342 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
SYNE2-221ENST00000556342 CAMK2N2Q96S95 79 aa6.5□□□□□ -1.37
SYNE2-221ENST00000556342 COX7A2LO14548 114 aa6.49□□□□□ -1.37
SYNE2-221ENST00000556342 RPL18AQ02543 176 aaKnown RBP6.49□□□□□ -1.37
SYNE2-221ENST00000556342 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
SYNE2-221ENST00000556342 C7orf77A4D0Y5 90 aa6.48□□□□□ -1.37
SYNE2-221ENST00000556342 C1orf196B1AJZ1 125 aa6.48□□□□□ -1.37
SYNE2-221ENST00000556342 K7EN84 100 aa6.48□□□□□ -1.37
SYNE2-221ENST00000556342 IGLV7-43P04211 117 aa6.48□□□□□ -1.37
SYNE2-221ENST00000556342 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
SYNE2-221ENST00000556342 ST20Q9HBF5 79 aa6.48□□□□□ -1.37
SYNE2-221ENST00000556342 TRBV27A0A0K0K1C4 114 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms