RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ESDP10768 282 aa7.55□□□□□ -1.2
SLIRP-205ENST00000556310 ZNF25P17030 456 aaPredicted RBP7.55□□□□□ -1.2
SLIRP-205ENST00000556310 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
SLIRP-205ENST00000556310 ATP5L2Q7Z4Y8 100 aa7.55□□□□□ -1.2
SLIRP-205ENST00000556310 FAT1Q14517 4588 aa7.54□□□□□ -1.2
SLIRP-205ENST00000556310 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
SLIRP-205ENST00000556310 F8W036 122 aa7.54□□□□□ -1.2
SLIRP-205ENST00000556310 VCYO14598 125 aa7.54□□□□□ -1.2
SLIRP-205ENST00000556310 MT-ND4LP03901 98 aa7.54□□□□□ -1.2
SLIRP-205ENST00000556310 RNASEKQ6P5S7 137 aaKnown RBP7.54□□□□□ -1.2
SLIRP-205ENST00000556310 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
SLIRP-205ENST00000556310 KRTAP4-5Q9BYR2 181 aa7.54□□□□□ -1.2
SLIRP-205ENST00000556310 Q6ZSA8 131 aa7.53□□□□□ -1.2
SLIRP-205ENST00000556310 TRBV24-1A0A075B6N3 115 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 ADCYAP1P18509 176 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 FCER1GP30273 86 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 CKS2P33552 79 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 RPL32P62910 135 aaKnown RBP7.52□□□□□ -1.21
SLIRP-205ENST00000556310 MRPL52Q86TS9 123 aaKnown RBP7.52□□□□□ -1.21
SLIRP-205ENST00000556310 TMEM101Q96IK0 257 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 BTF3L4Q96K17 158 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 KIR2DL4Q99706 377 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 C20orf78Q9BR46 151 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 FAM30AQ9NZY2 134 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
SLIRP-205ENST00000556310 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
SLIRP-205ENST00000556310 D6R8Y8 96 aa7.51□□□□□ -1.21
SLIRP-205ENST00000556310 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
SLIRP-205ENST00000556310 PPBPP02775 128 aa7.51□□□□□ -1.21
SLIRP-205ENST00000556310 PRSS1P07477 247 aa7.51□□□□□ -1.21
SLIRP-205ENST00000556310 LINC01620Q4KN68 170 aa7.51□□□□□ -1.21
SLIRP-205ENST00000556310 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
SLIRP-205ENST00000556310 TMEM218A2RU14 115 aa7.5□□□□□ -1.21
SLIRP-205ENST00000556310 EPM2AB3EWF7 344 aa7.5□□□□□ -1.21
SLIRP-205ENST00000556310 PHOX2AO14813 284 aa7.5□□□□□ -1.21
SLIRP-205ENST00000556310 TCAPO15273 167 aa7.5□□□□□ -1.21
SLIRP-205ENST00000556310 HAMPP81172 84 aa7.5□□□□□ -1.21
SLIRP-205ENST00000556310 SMAGPQ0VAQ4 97 aa7.5□□□□□ -1.21
SLIRP-205ENST00000556310 SMIM2Q9BVW6 85 aa7.5□□□□□ -1.21
SLIRP-205ENST00000556310 GAGE12HA6NDE8 117 aa7.49□□□□□ -1.21
SLIRP-205ENST00000556310 NPYP01303 97 aa7.49□□□□□ -1.21
SLIRP-205ENST00000556310 DGAT2L7PQ6IED9 249 aa7.49□□□□□ -1.21
SLIRP-205ENST00000556310 COMMD7Q86VX2 200 aa7.49□□□□□ -1.21
SLIRP-205ENST00000556310 ORMDL3Q8N138 153 aa7.49□□□□□ -1.21
SLIRP-205ENST00000556310 CHCHD10Q8WYQ3 142 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-205ENST00000556310 hDV102S1A0JD36 115 aa7.48□□□□□ -1.21
SLIRP-205ENST00000556310 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
SLIRP-205ENST00000556310 TMEM18Q96B42 140 aa7.48□□□□□ -1.21
SLIRP-205ENST00000556310 IMMP2LQ96T52 175 aa7.48□□□□□ -1.21
SLIRP-205ENST00000556310 SEC11CQ9BY50 192 aa7.48□□□□□ -1.21
SLIRP-205ENST00000556310 CDC42SE2Q9NRR3 84 aa7.48□□□□□ -1.21
SLIRP-205ENST00000556310 UBE2D4Q9Y2X8 147 aa7.48□□□□□ -1.21
SLIRP-205ENST00000556310 CSDC2Q9Y534 153 aaKnown RBP7.48□□□□□ -1.21
SLIRP-205ENST00000556310 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 C9orf118A6NHY6 69 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
SLIRP-205ENST00000556310 Q5VSD8 79 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 TMEM136Q6ZRR5 245 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 C15orf56Q8N910 161 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 C9orf163Q8N9P6 203 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 PRELID3AQ96N28 172 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 CTDSP1Q9GZU7 261 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 LAMTOR2Q9Y2Q5 125 aa7.47□□□□□ -1.21
SLIRP-205ENST00000556310 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.21
SLIRP-205ENST00000556310 SMR3BP02814 79 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-205ENST00000556310 FOXI1Q12951 378 aa7.46□□□□□ -1.22
SLIRP-205ENST00000556310 CFAP161Q6P656 301 aa7.46□□□□□ -1.22
SLIRP-205ENST00000556310 SCXQ7RTU7 201 aa7.46□□□□□ -1.22
SLIRP-205ENST00000556310 TRAV9-1A0A075B6T8 112 aa7.45□□□□□ -1.22
SLIRP-205ENST00000556310 CCL25O15444 150 aa7.45□□□□□ -1.22
SLIRP-205ENST00000556310 XCL1P47992 114 aa7.45□□□□□ -1.22
SLIRP-205ENST00000556310 SS18Q15532 418 aa7.45□□□□□ -1.22
SLIRP-205ENST00000556310 Q6ZUT4 128 aa7.45□□□□□ -1.22
SLIRP-205ENST00000556310 CHAC1Q9BUX1 264 aa7.45□□□□□ -1.22
SLIRP-205ENST00000556310 GVQW2A0A096LPI5 108 aaPredicted RBP7.44□□□□□ -1.22
SLIRP-205ENST00000556310 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.44□□□□□ -1.22
SLIRP-205ENST00000556310 PRSS47A8MTI9 375 aa7.44□□□□□ -1.22
SLIRP-205ENST00000556310 RPL39P62891 51 aaKnown RBP7.44□□□□□ -1.22
SLIRP-205ENST00000556310 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
SLIRP-205ENST00000556310 SPANXA1Q9NS26 97 aa7.44□□□□□ -1.22
SLIRP-205ENST00000556310 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
SLIRP-205ENST00000556310 RAB5AP20339 215 aa7.43□□□□□ -1.22
SLIRP-205ENST00000556310 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
SLIRP-205ENST00000556310 RNASE13Q5GAN3 156 aaKnown RBP7.43□□□□□ -1.22
SLIRP-205ENST00000556310 C10orf91Q5T1B1 145 aa7.43□□□□□ -1.22
SLIRP-205ENST00000556310 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
SLIRP-205ENST00000556310 CARHSP1Q9Y2V2 147 aaKnown RBP7.43□□□□□ -1.22
SLIRP-205ENST00000556310 IGHV1-58A0A0C4DH39 117 aa7.42□□□□□ -1.22
SLIRP-205ENST00000556310 SLPIP03973 132 aa7.42□□□□□ -1.22
SLIRP-205ENST00000556310 S100PP25815 95 aa7.42□□□□□ -1.22
SLIRP-205ENST00000556310 CIRBP-AS1Q8TBR5 109 aa7.42□□□□□ -1.22
SLIRP-205ENST00000556310 IGHV3-64A0A075B6Q5 118 aa7.41□□□□□ -1.22
SLIRP-205ENST00000556310 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
SLIRP-205ENST00000556310 MRPS36P82909 103 aaKnown RBP7.41□□□□□ -1.22
SLIRP-205ENST00000556310 RHEBQ15382 184 aa7.41□□□□□ -1.22
SLIRP-205ENST00000556310 SDIM1Q6ZPB5 146 aa7.41□□□□□ -1.22
SLIRP-205ENST00000556310 Q8N8P6 123 aa7.41□□□□□ -1.22
SLIRP-205ENST00000556310 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
SLIRP-205ENST00000556310 FAM104AQ969W3 186 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms