RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PCLOQ9Y6V0 5065 aa9.92□□□□□ -0.82
ACTN1-217ENST00000556203 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
ACTN1-217ENST00000556203 PRSS1P07477 247 aa9.91□□□□□ -0.82
ACTN1-217ENST00000556203 HAMPP81172 84 aa9.91□□□□□ -0.82
ACTN1-217ENST00000556203 CHCHD10Q8WYQ3 142 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-217ENST00000556203 PRELID3AQ96N28 172 aa9.91□□□□□ -0.82
ACTN1-217ENST00000556203 KRTAP4-5Q9BYR2 181 aa9.91□□□□□ -0.82
ACTN1-217ENST00000556203 FAM30AQ9NZY2 134 aa9.91□□□□□ -0.82
ACTN1-217ENST00000556203 TCAPO15273 167 aa9.9□□□□□ -0.82
ACTN1-217ENST00000556203 DGAT2L7PQ6IED9 249 aa9.9□□□□□ -0.82
ACTN1-217ENST00000556203 Q8N1X5 172 aa9.9□□□□□ -0.82
ACTN1-217ENST00000556203 CDC42SE2Q9NRR3 84 aa9.9□□□□□ -0.82
ACTN1-217ENST00000556203 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.82
ACTN1-217ENST00000556203 SMAGPQ0VAQ4 97 aa9.89□□□□□ -0.83
ACTN1-217ENST00000556203 C10orf91Q5T1B1 145 aa9.89□□□□□ -0.83
ACTN1-217ENST00000556203 ZNF664Q8N3J9 261 aa9.89□□□□□ -0.83
ACTN1-217ENST00000556203 CLRN3Q8NCR9 226 aa9.89□□□□□ -0.83
ACTN1-217ENST00000556203 TMEM18Q96B42 140 aa9.89□□□□□ -0.83
ACTN1-217ENST00000556203 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
ACTN1-217ENST00000556203 LAMTOR2Q9Y2Q5 125 aa9.88□□□□□ -0.83
ACTN1-217ENST00000556203 CARHSP1Q9Y2V2 147 aaKnown RBP9.88□□□□□ -0.83
ACTN1-217ENST00000556203 CSDC2Q9Y534 153 aaKnown RBP9.88□□□□□ -0.83
ACTN1-217ENST00000556203 ABCA13Q86UQ4 5058 aa9.87□□□□□ -0.83
ACTN1-217ENST00000556203 hDV102S1A0JD36 115 aa9.87□□□□□ -0.83
ACTN1-217ENST00000556203 XCL1P47992 114 aa9.87□□□□□ -0.83
ACTN1-217ENST00000556203 TRAV9-1A0A075B6T8 112 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 LOC389332A0A1B0GUA5 103 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 CCL25O15444 150 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 RAB5AP20339 215 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 S100PP25815 95 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 RPL39P62891 51 aaKnown RBP9.86□□□□□ -0.83
ACTN1-217ENST00000556203 FOXI1Q12951 378 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 SS18Q15532 418 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
ACTN1-217ENST00000556203 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 Q6ZSA8 131 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 MAP1LC3AQ9H492 121 aa9.86□□□□□ -0.83
ACTN1-217ENST00000556203 PRSS47A8MTI9 375 aa9.85□□□□□ -0.83
ACTN1-217ENST00000556203 RHEBQ15382 184 aa9.85□□□□□ -0.83
ACTN1-217ENST00000556203 Q6ZUT4 128 aa9.85□□□□□ -0.83
ACTN1-217ENST00000556203 RPS10P5Q9NQ39 176 aa9.85□□□□□ -0.83
ACTN1-217ENST00000556203 DNAH8Q96JB1 4490 aa9.84□□□□□ -0.83
ACTN1-217ENST00000556203 SMR3BP02814 79 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-217ENST00000556203 C15orf56Q8N910 161 aa9.84□□□□□ -0.83
ACTN1-217ENST00000556203 AP5S1Q9NUS5 200 aa9.84□□□□□ -0.83
ACTN1-217ENST00000556203 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
ACTN1-217ENST00000556203 EPM2AB3EWF7 344 aa9.83□□□□□ -0.84
ACTN1-217ENST00000556203 CNBPP62633 177 aaKnown RBP9.83□□□□□ -0.84
ACTN1-217ENST00000556203 KIAA1644Q3SXP7 199 aa9.83□□□□□ -0.84
ACTN1-217ENST00000556203 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
ACTN1-217ENST00000556203 SPANXA1Q9NS26 97 aa9.83□□□□□ -0.84
ACTN1-217ENST00000556203 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
ACTN1-217ENST00000556203 Q8N8P6 123 aa9.82□□□□□ -0.84
ACTN1-217ENST00000556203 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
ACTN1-217ENST00000556203 C1orf196B1AJZ1 125 aa9.81□□□□□ -0.84
ACTN1-217ENST00000556203 APOC3P02656 99 aa9.81□□□□□ -0.84
ACTN1-217ENST00000556203 SLPIP03973 132 aa9.81□□□□□ -0.84
ACTN1-217ENST00000556203 FAM104AQ969W3 186 aa9.81□□□□□ -0.84
ACTN1-217ENST00000556203 OPRPNQ99935 248 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-217ENST00000556203 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-217ENST00000556203 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-217ENST00000556203 NDUFA5Q16718 116 aa9.8□□□□□ -0.84
ACTN1-217ENST00000556203 Q5VSD8 79 aa9.8□□□□□ -0.84
ACTN1-217ENST00000556203 SCXQ7RTU7 201 aa9.8□□□□□ -0.84
ACTN1-217ENST00000556203 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
ACTN1-217ENST00000556203 FAT1Q14517 4588 aa9.79□□□□□ -0.84
ACTN1-217ENST00000556203 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
ACTN1-217ENST00000556203 IFI27P40305 119 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-217ENST00000556203 MRPS36P82909 103 aaKnown RBP9.79□□□□□ -0.84
ACTN1-217ENST00000556203 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
ACTN1-217ENST00000556203 NXT2Q9NPJ8 142 aaKnown RBP9.79□□□□□ -0.84
ACTN1-217ENST00000556203 COX19Q49B96 90 aa9.78□□□□□ -0.84
ACTN1-217ENST00000556203 ORMDL2Q53FV1 153 aa9.78□□□□□ -0.84
ACTN1-217ENST00000556203 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
ACTN1-217ENST00000556203 SVBPQ8N300 66 aa9.78□□□□□ -0.84
ACTN1-217ENST00000556203 IGHV3-64A0A075B6Q5 118 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 K7EMI3 77 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 COX7A2LO14548 114 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 SNAPINO95295 136 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 MALP21145 153 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 C2orf66Q6UXQ4 117 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 CIRBP-AS1Q8TBR5 109 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
ACTN1-217ENST00000556203 TGIF2-C20orf24A0A0A6YYL0 155 aa9.76□□□□□ -0.85
ACTN1-217ENST00000556203 IFITM10A6NMD0 228 aa9.76□□□□□ -0.85
ACTN1-217ENST00000556203 FAM229AH3BQW9 127 aa9.76□□□□□ -0.85
ACTN1-217ENST00000556203 MT-ND6P03923 174 aa9.76□□□□□ -0.85
ACTN1-217ENST00000556203 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
ACTN1-217ENST00000556203 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
ACTN1-217ENST00000556203 CYSLTR1Q9Y271 337 aa9.76□□□□□ -0.85
ACTN1-217ENST00000556203 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-217ENST00000556203 IGLV4-3A0A075B6K6 122 aa9.75□□□□□ -0.85
ACTN1-217ENST00000556203 FABP9Q0Z7S8 132 aa9.75□□□□□ -0.85
ACTN1-217ENST00000556203 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
ACTN1-217ENST00000556203 TMEM141Q96I45 108 aa9.75□□□□□ -0.85
ACTN1-217ENST00000556203 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
ACTN1-217ENST00000556203 PANO1I0J062 215 aa9.74□□□□□ -0.85
ACTN1-217ENST00000556203 LINC00528Q8N1L1 170 aa9.74□□□□□ -0.85
ACTN1-217ENST00000556203 PRSS3P2Q8NHM4 247 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms