RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TEX261Q6UWH6 196 aa8.78□□□□□ -1
CHMP4BP1-201ENST00000556017 IGLV4-69A0A075B6H9 119 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 TEX46H3BTG2 121 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 PMCHP20382 165 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 CAMPP49913 170 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 FAM231DQ6ZW35 169 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 ZNF664Q8N3J9 261 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 NUP35Q8NFH5 326 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
CHMP4BP1-201ENST00000556017 TRBV27A0A0K0K1C4 114 aa8.76□□□□□ -1.01
CHMP4BP1-201ENST00000556017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.76□□□□□ -1.01
CHMP4BP1-201ENST00000556017 MRAP2Q96G30 205 aa8.76□□□□□ -1.01
CHMP4BP1-201ENST00000556017 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 SS18Q15532 418 aa8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 EIF5AL1Q6IS14 154 aaKnown RBP8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 TMEM101Q96IK0 257 aa8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 BTF3L4Q96K17 158 aa8.75□□□□□ -1.01
CHMP4BP1-201ENST00000556017 GATCO43716 136 aaKnown RBP8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 RAB4AP20338 218 aa8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 SMIM15Q7Z3B0 74 aa8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 PKIGQ9Y2B9 76 aa8.74□□□□□ -1.01
CHMP4BP1-201ENST00000556017 A8MWL6 223 aa8.73□□□□□ -1.01
CHMP4BP1-201ENST00000556017 TAGLN2P37802 199 aaKnown RBP8.73□□□□□ -1.01
CHMP4BP1-201ENST00000556017 RNASE13Q5GAN3 156 aaKnown RBP8.73□□□□□ -1.01
CHMP4BP1-201ENST00000556017 CT83Q5H943 113 aa8.73□□□□□ -1.01
CHMP4BP1-201ENST00000556017 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
CHMP4BP1-201ENST00000556017 UBE2D4Q9Y2X8 147 aa8.73□□□□□ -1.01
CHMP4BP1-201ENST00000556017 MUC2Q02817 5179 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 C7orf77A4D0Y5 90 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 TMEM250H0YL14 139 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 SMKR1H3BMG3 65 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 SLC51BQ86UW2 128 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 AMN1Q8IY45 258 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 NRACQ8N912 160 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
CHMP4BP1-201ENST00000556017 C1orf196B1AJZ1 125 aa8.71□□□□□ -1.02
CHMP4BP1-201ENST00000556017 APOMO95445 188 aa8.71□□□□□ -1.02
CHMP4BP1-201ENST00000556017 C2orf48Q96LS8 159 aa8.71□□□□□ -1.02
CHMP4BP1-201ENST00000556017 A0A1B0GUT8 65 aa8.7□□□□□ -1.02
CHMP4BP1-201ENST00000556017 HIGD1CA8MV81 97 aa8.7□□□□□ -1.02
CHMP4BP1-201ENST00000556017 COX7A2LO14548 114 aa8.7□□□□□ -1.02
CHMP4BP1-201ENST00000556017 Q6ZUT4 128 aa8.7□□□□□ -1.02
CHMP4BP1-201ENST00000556017 TCTE3Q8IZS6 198 aa8.7□□□□□ -1.02
CHMP4BP1-201ENST00000556017 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
CHMP4BP1-201ENST00000556017 OPRPNQ99935 248 aaPredicted RBP8.7□□□□□ -1.02
CHMP4BP1-201ENST00000556017 C5orf38Q86SI9 138 aa8.69□□□□□ -1.02
CHMP4BP1-201ENST00000556017 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
CHMP4BP1-201ENST00000556017 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
CHMP4BP1-201ENST00000556017 TSKUQ8WUA8 353 aa8.69□□□□□ -1.02
CHMP4BP1-201ENST00000556017 ISOC2Q96AB3 205 aa8.69□□□□□ -1.02
CHMP4BP1-201ENST00000556017 CAMK2N2Q96S95 79 aa8.69□□□□□ -1.02
CHMP4BP1-201ENST00000556017 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
CHMP4BP1-201ENST00000556017 RNF151Q2KHN1 245 aa8.68□□□□□ -1.02
CHMP4BP1-201ENST00000556017 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
CHMP4BP1-201ENST00000556017 FAM168BA1KXE4 195 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 VCYO14598 125 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 MT-ND6P03923 174 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 KRTAP1-4P0C5Y4 121 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 MALP21145 153 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 V9GYV3 84 aa8.67□□□□□ -1.02
CHMP4BP1-201ENST00000556017 SUMO2P61956 95 aaKnown RBP8.66□□□□□ -1.02
CHMP4BP1-201ENST00000556017 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
CHMP4BP1-201ENST00000556017 TIMM21Q9BVV7 248 aa8.66□□□□□ -1.02
CHMP4BP1-201ENST00000556017 OSTCQ9NRP0 149 aa8.66□□□□□ -1.02
CHMP4BP1-201ENST00000556017 IGHV3OR16-9A0A0B4J2B5 98 aa8.65□□□□□ -1.02
CHMP4BP1-201ENST00000556017 ALKAL2Q6UX46 152 aa8.65□□□□□ -1.02
CHMP4BP1-201ENST00000556017 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.02
CHMP4BP1-201ENST00000556017 FCER1GP30273 86 aa8.64□□□□□ -1.03
CHMP4BP1-201ENST00000556017 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
CHMP4BP1-201ENST00000556017 MRPL51Q4U2R6 128 aaKnown RBP8.64□□□□□ -1.03
CHMP4BP1-201ENST00000556017 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
CHMP4BP1-201ENST00000556017 H0Y9J4 135 aa8.63□□□□□ -1.03
CHMP4BP1-201ENST00000556017 CEBPGP53567 150 aa8.63□□□□□ -1.03
CHMP4BP1-201ENST00000556017 OR10D4PQ8NGN7 298 aa8.63□□□□□ -1.03
CHMP4BP1-201ENST00000556017 BORCS7Q96B45 105 aa8.63□□□□□ -1.03
CHMP4BP1-201ENST00000556017 SMIM7Q9BQ49 75 aa8.63□□□□□ -1.03
CHMP4BP1-201ENST00000556017 SRP19P09132 144 aaKnown RBP8.62□□□□□ -1.03
CHMP4BP1-201ENST00000556017 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
CHMP4BP1-201ENST00000556017 UNQ6190/PRO20217Q6UXQ8 127 aa8.62□□□□□ -1.03
CHMP4BP1-201ENST00000556017 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
CHMP4BP1-201ENST00000556017 C6orf48Q9UBA6 75 aa8.62□□□□□ -1.03
CHMP4BP1-201ENST00000556017 TRBV24-1A0A075B6N3 115 aa8.61□□□□□ -1.03
CHMP4BP1-201ENST00000556017 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
CHMP4BP1-201ENST00000556017 BLOC1S1P78537 153 aa8.61□□□□□ -1.03
CHMP4BP1-201ENST00000556017 KIAA0087Q14695 138 aa8.61□□□□□ -1.03
CHMP4BP1-201ENST00000556017 FAM104BQ5XKR9 115 aa8.61□□□□□ -1.03
CHMP4BP1-201ENST00000556017 ORAOV1Q8WV07 137 aa8.61□□□□□ -1.03
CHMP4BP1-201ENST00000556017 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
CHMP4BP1-201ENST00000556017 RIGQ13278 110 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms