RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 FGF6P10767 208 aa5.35□□□□□ -1.55
PRKCH-218ENST00000555628 RPL13AP40429 203 aaKnown RBP5.35□□□□□ -1.55
PRKCH-218ENST00000555628 SSTP61278 116 aa5.35□□□□□ -1.55
PRKCH-218ENST00000555628 PET117Q6UWS5 81 aa5.35□□□□□ -1.55
PRKCH-218ENST00000555628 RPP21Q9H633 154 aaKnown RBP5.35□□□□□ -1.55
PRKCH-218ENST00000555628 IGLV4-69A0A075B6H9 119 aa5.34□□□□□ -1.55
PRKCH-218ENST00000555628 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.34□□□□□ -1.55
PRKCH-218ENST00000555628 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
PRKCH-218ENST00000555628 INMT-MINDY4F8WBC2 141 aa5.34□□□□□ -1.55
PRKCH-218ENST00000555628 H7C423 109 aa5.34□□□□□ -1.55
PRKCH-218ENST00000555628 AKR1C3P42330 323 aa5.34□□□□□ -1.55
PRKCH-218ENST00000555628 IFITM3Q01628 133 aa5.34□□□□□ -1.55
PRKCH-218ENST00000555628 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.55
PRKCH-218ENST00000555628 FAM168BA1KXE4 195 aa5.33□□□□□ -1.56
PRKCH-218ENST00000555628 RPL7L1Q6DKI1 246 aaKnown RBP5.33□□□□□ -1.56
PRKCH-218ENST00000555628 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
PRKCH-218ENST00000555628 TRAV1-1A0A0B4J248 108 aa5.32□□□□□ -1.56
PRKCH-218ENST00000555628 MAP1LC3B2A6NCE7 125 aa5.32□□□□□ -1.56
PRKCH-218ENST00000555628 NCR2O95944 276 aa5.32□□□□□ -1.56
PRKCH-218ENST00000555628 ZNF25P17030 456 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-218ENST00000555628 GATD1Q8NB37 220 aa5.32□□□□□ -1.56
PRKCH-218ENST00000555628 ENKURQ8TC29 256 aa5.32□□□□□ -1.56
PRKCH-218ENST00000555628 MAP1LC3BQ9GZQ8 125 aa5.32□□□□□ -1.56
PRKCH-218ENST00000555628 A0A087X002 238 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 C19orf71A6NCJ1 209 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 S100A9P06702 114 aaKnown RBP5.31□□□□□ -1.56
PRKCH-218ENST00000555628 ESDP10768 282 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 UBE2D1P51668 147 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 Q5BKY6 102 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 CST9LP1Q5W188 147 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 AMMECR1LQ6DCA0 310 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 BAGE2Q86Y30 109 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 CNFNQ9BYD5 112 aa5.31□□□□□ -1.56
PRKCH-218ENST00000555628 A0A087WZ39 114 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 BCL2L11O43521 198 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 SSNA1O43805 119 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 UPK1BO75841 260 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 TSPAN13O95857 204 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 CTRLP40313 264 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 RNASEKQ6P5S7 137 aaKnown RBP5.3□□□□□ -1.56
PRKCH-218ENST00000555628 STOML3Q8TAV4 291 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 ISOC2Q96AB3 205 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 RPL39LQ96EH5 51 aaKnown RBP5.3□□□□□ -1.56
PRKCH-218ENST00000555628 CDC42SE2Q9NRR3 84 aa5.3□□□□□ -1.56
PRKCH-218ENST00000555628 APCSP02743 223 aa5.29□□□□□ -1.56
PRKCH-218ENST00000555628 EIF5AP63241 154 aaKnown RBP5.29□□□□□ -1.56
PRKCH-218ENST00000555628 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
PRKCH-218ENST00000555628 LINC00299Q6ZSB3 139 aa5.29□□□□□ -1.56
PRKCH-218ENST00000555628 MRPL52Q86TS9 123 aaKnown RBP5.29□□□□□ -1.56
PRKCH-218ENST00000555628 OPRPNQ99935 248 aaPredicted RBP5.29□□□□□ -1.56
PRKCH-218ENST00000555628 TSHBP01222 138 aa5.28□□□□□ -1.56
PRKCH-218ENST00000555628 TRGC1P0CF51 173 aa5.28□□□□□ -1.56
PRKCH-218ENST00000555628 Q8N9P0 234 aaPredicted RBP5.28□□□□□ -1.56
PRKCH-218ENST00000555628 CAMK2N2Q96S95 79 aa5.28□□□□□ -1.56
PRKCH-218ENST00000555628 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
PRKCH-218ENST00000555628 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
PRKCH-218ENST00000555628 A4D1N5 150 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 SDHAF1A6NFY7 115 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 F2Z2F3 143 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 G3V3Q6 166 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 RPL35P42766 123 aaKnown RBP5.27□□□□□ -1.57
PRKCH-218ENST00000555628 AKR1C8PQ5T2L2 129 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 LYZL1Q6UWQ5 148 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 C9orf62Q8N4C0 152 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 OR2D3Q8NGH3 330 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 TSKUQ8WUA8 353 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 C11orf52Q96A22 123 aa5.27□□□□□ -1.57
PRKCH-218ENST00000555628 MRPL35Q9NZE8 188 aaKnown RBP5.27□□□□□ -1.57
PRKCH-218ENST00000555628 TRBV6-5A0A0K0K1A5 114 aa5.26□□□□□ -1.57
PRKCH-218ENST00000555628 COX7A2LO14548 114 aa5.26□□□□□ -1.57
PRKCH-218ENST00000555628 RPS20P60866 119 aaKnown RBP5.26□□□□□ -1.57
PRKCH-218ENST00000555628 SUMO2P61956 95 aaKnown RBP5.26□□□□□ -1.57
PRKCH-218ENST00000555628 SS18Q15532 418 aa5.26□□□□□ -1.57
PRKCH-218ENST00000555628 EIF5AL1Q6IS14 154 aaKnown RBP5.26□□□□□ -1.57
PRKCH-218ENST00000555628 TMUB2Q71RG4 321 aa5.26□□□□□ -1.57
PRKCH-218ENST00000555628 FAM19A5Q7Z5A7 132 aaPredicted RBP5.26□□□□□ -1.57
PRKCH-218ENST00000555628 MBD3L1Q8WWY6 194 aa5.26□□□□□ -1.57
PRKCH-218ENST00000555628 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
PRKCH-218ENST00000555628 CYTL1Q9NRR1 136 aa5.26□□□□□ -1.57
PRKCH-218ENST00000555628 TRBV20OR9-2A0A075B6H5 130 aa5.25□□□□□ -1.57
PRKCH-218ENST00000555628 ZNF861PO60384 105 aa5.25□□□□□ -1.57
PRKCH-218ENST00000555628 FOXA3P55318 350 aaPredicted RBP5.25□□□□□ -1.57
PRKCH-218ENST00000555628 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
PRKCH-218ENST00000555628 CENPWQ5EE01 88 aa5.25□□□□□ -1.57
PRKCH-218ENST00000555628 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
PRKCH-218ENST00000555628 RNASE7Q9H1E1 156 aaKnown RBP5.25□□□□□ -1.57
PRKCH-218ENST00000555628 BORCS7-ASMTA0A0B4J1R7 106 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 M0QXV9 152 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 DEFA1P59665 94 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 TMEM101Q96IK0 257 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 SMDT1Q9H4I9 107 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 C6orf48Q9UBA6 75 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 ALG5Q9Y673 324 aa5.24□□□□□ -1.57
PRKCH-218ENST00000555628 C1orf196B1AJZ1 125 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 I3L3M4 83 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms