RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 TMEM262E9PQX1 116 aa13.83□□□□□ -0.19
FOXN3-209ENST00000555353 AMMECR1LQ6DCA0 310 aa13.83□□□□□ -0.19
FOXN3-209ENST00000555353 DNAH17Q9UFH2 4485 aa13.83□□□□□ -0.19
FOXN3-209ENST00000555353 NUPR1O60356 82 aa13.83□□□□□ -0.2
FOXN3-209ENST00000555353 GAGE6Q13070 117 aa13.83□□□□□ -0.2
FOXN3-209ENST00000555353 PMCHL1Q16048 86 aa13.83□□□□□ -0.2
FOXN3-209ENST00000555353 TOMM6Q96B49 74 aa13.83□□□□□ -0.2
FOXN3-209ENST00000555353 A0A1B0GVY2 172 aa13.82□□□□□ -0.2
FOXN3-209ENST00000555353 Q6ZRN7 208 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-209ENST00000555353 FAM19A2Q8N3H0 131 aa13.82□□□□□ -0.2
FOXN3-209ENST00000555353 ZNF25P17030 456 aaPredicted RBP13.81□□□□□ -0.2
FOXN3-209ENST00000555353 RPL39P62891 51 aaKnown RBP13.81□□□□□ -0.2
FOXN3-209ENST00000555353 DGAT2L7PQ6IED9 249 aa13.81□□□□□ -0.2
FOXN3-209ENST00000555353 Q9HAA7 133 aa13.81□□□□□ -0.2
FOXN3-209ENST00000555353 FGF6P10767 208 aa13.8□□□□□ -0.2
FOXN3-209ENST00000555353 MRPL52Q86TS9 123 aaKnown RBP13.8□□□□□ -0.2
FOXN3-209ENST00000555353 TMEM101Q96IK0 257 aa13.8□□□□□ -0.2
FOXN3-209ENST00000555353 TIMM21Q9BVV7 248 aa13.8□□□□□ -0.2
FOXN3-209ENST00000555353 SPANXA1Q9NS26 97 aa13.8□□□□□ -0.2
FOXN3-209ENST00000555353 S100A2P29034 98 aa13.79□□□□□ -0.2
FOXN3-209ENST00000555353 SCGB3A1Q96QR1 104 aa13.79□□□□□ -0.2
FOXN3-209ENST00000555353 A0A096LNJ9 63 aa13.79□□□□□ -0.2
FOXN3-209ENST00000555353 SNRPEP62304 92 aaKnown RBP13.79□□□□□ -0.2
FOXN3-209ENST00000555353 UBE2D4Q9Y2X8 147 aa13.79□□□□□ -0.2
FOXN3-209ENST00000555353 PYGO1Q9Y3Y4 419 aa13.79□□□□□ -0.2
FOXN3-209ENST00000555353 PDZD11Q5EBL8 140 aa13.78□□□□□ -0.2
FOXN3-209ENST00000555353 ERASQ7Z444 233 aa13.78□□□□□ -0.2
FOXN3-209ENST00000555353 OR5A1Q8NGJ0 315 aa13.78□□□□□ -0.2
FOXN3-209ENST00000555353 CSDC2Q9Y534 153 aaKnown RBP13.78□□□□□ -0.2
FOXN3-209ENST00000555353 TRAV8-3A0A0A6YYJ7 113 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 A0A1B0GUV1 79 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 ATP5LO75964 103 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 LEPROTL1O95214 131 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 TMEM141Q96I45 108 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 TIMM17AQ99595 171 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 HSPB8Q9UJY1 196 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 KLK12Q9UKR0 248 aa13.77□□□□□ -0.21
FOXN3-209ENST00000555353 HECTD4Q9Y4D8 3996 aa13.76□□□□□ -0.21
FOXN3-209ENST00000555353 C5orf52A6NGY3 159 aa13.76□□□□□ -0.21
FOXN3-209ENST00000555353 PSCAO43653 123 aa13.76□□□□□ -0.21
FOXN3-209ENST00000555353 NPSP0C0P6 89 aa13.76□□□□□ -0.21
FOXN3-209ENST00000555353 PAPPA-AS1Q5QFB9 102 aa13.76□□□□□ -0.21
FOXN3-209ENST00000555353 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-209ENST00000555353 RBX1P62877 108 aa13.75□□□□□ -0.21
FOXN3-209ENST00000555353 MPV17L2Q567V2 206 aa13.75□□□□□ -0.21
FOXN3-209ENST00000555353 HIST3H2BBQ8N257 126 aa13.75□□□□□ -0.21
FOXN3-209ENST00000555353 PACRGQ96M98 296 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-209ENST00000555353 IGIPA6NJ69 53 aa13.75□□□□□ -0.21
FOXN3-209ENST00000555353 FABP4P15090 132 aa13.75□□□□□ -0.21
FOXN3-209ENST00000555353 Q6ZN92 141 aa13.75□□□□□ -0.21
FOXN3-209ENST00000555353 EREGO14944 169 aa13.74□□□□□ -0.21
FOXN3-209ENST00000555353 ANGP03950 147 aaKnown RBP13.73□□□□□ -0.21
FOXN3-209ENST00000555353 MRPS36P82909 103 aaKnown RBP13.73□□□□□ -0.21
FOXN3-209ENST00000555353 Q8N976 141 aa13.73□□□□□ -0.21
FOXN3-209ENST00000555353 UBE2WQ96B02 151 aa13.73□□□□□ -0.21
FOXN3-209ENST00000555353 TM2D2Q9BX73 214 aa13.73□□□□□ -0.21
FOXN3-209ENST00000555353 PKD1P98161 4303 aa13.72□□□□□ -0.21
FOXN3-209ENST00000555353 IGLV4-60A0A075B6I1 120 aa13.71□□□□□ -0.21
FOXN3-209ENST00000555353 ZNF664Q8N3J9 261 aa13.71□□□□□ -0.21
FOXN3-209ENST00000555353 IFI27L1Q96BM0 104 aa13.71□□□□□ -0.21
FOXN3-209ENST00000555353 RMI2Q96E14 147 aa13.71□□□□□ -0.21
FOXN3-209ENST00000555353 CDC42SE2Q9NRR3 84 aa13.71□□□□□ -0.21
FOXN3-209ENST00000555353 IGLV4-3A0A075B6K6 122 aa13.71□□□□□ -0.22
FOXN3-209ENST00000555353 CRPP02741 224 aa13.71□□□□□ -0.22
FOXN3-209ENST00000555353 VCX2Q9H322 139 aa13.71□□□□□ -0.22
FOXN3-209ENST00000555353 BIRC6Q9NR09 4857 aa13.7□□□□□ -0.22
FOXN3-209ENST00000555353 TEX43Q6ZNM6 134 aa13.7□□□□□ -0.22
FOXN3-209ENST00000555353 Q6ZUT4 128 aa13.7□□□□□ -0.22
FOXN3-209ENST00000555353 COX11Q9Y6N1 276 aa13.7□□□□□ -0.22
FOXN3-209ENST00000555353 A0A087WTM6 91 aa13.69□□□□□ -0.22
FOXN3-209ENST00000555353 SPATA12Q7Z6I5 190 aa13.69□□□□□ -0.22
FOXN3-209ENST00000555353 HIST1H2BLQ99880 126 aa13.69□□□□□ -0.22
FOXN3-209ENST00000555353 OPRPNQ99935 248 aaPredicted RBP13.69□□□□□ -0.22
FOXN3-209ENST00000555353 MAP1LC3CQ9BXW4 147 aa13.69□□□□□ -0.22
FOXN3-209ENST00000555353 PKHD1P08F94 4074 aa13.69□□□□□ -0.22
FOXN3-209ENST00000555353 PRSS1P07477 247 aa13.68□□□□□ -0.22
FOXN3-209ENST00000555353 C2orf88Q9BSF0 95 aa13.68□□□□□ -0.22
FOXN3-209ENST00000555353 IGKV2D-24A0A075B6R9 120 aa13.67□□□□□ -0.22
FOXN3-209ENST00000555353 PMVKQ15126 192 aa13.66□□□□□ -0.22
FOXN3-209ENST00000555353 LINC00173Q6ZV60 143 aa13.66□□□□□ -0.22
FOXN3-209ENST00000555353 LINC00269Q8N2A0 174 aa13.66□□□□□ -0.22
FOXN3-209ENST00000555353 BAALCQ8WXS3 180 aa13.66□□□□□ -0.22
FOXN3-209ENST00000555353 RNASE13Q5GAN3 156 aaKnown RBP13.66□□□□□ -0.22
FOXN3-209ENST00000555353 ENHOQ6UWT2 76 aa13.66□□□□□ -0.22
FOXN3-209ENST00000555353 AMELXQ99217 191 aa13.66□□□□□ -0.22
FOXN3-209ENST00000555353 IFITM10A6NMD0 228 aa13.65□□□□□ -0.22
FOXN3-209ENST00000555353 C16orf90A8MZG2 172 aa13.65□□□□□ -0.22
FOXN3-209ENST00000555353 REG3AQ06141 175 aa13.65□□□□□ -0.22
FOXN3-209ENST00000555353 CLPSL2Q6UWE3 100 aa13.65□□□□□ -0.22
FOXN3-209ENST00000555353 C1orf43Q9BWL3 253 aa13.65□□□□□ -0.22
FOXN3-209ENST00000555353 KRTAP10-2P60368 255 aa13.64□□□□□ -0.23
FOXN3-209ENST00000555353 MIAQ16674 131 aa13.64□□□□□ -0.23
FOXN3-209ENST00000555353 FAM104AQ969W3 186 aa13.64□□□□□ -0.23
FOXN3-209ENST00000555353 IGKV3OR2-268A0A0C4DH90 116 aa13.63□□□□□ -0.23
FOXN3-209ENST00000555353 PRR34Q9NV39 138 aa13.63□□□□□ -0.23
FOXN3-209ENST00000555353 LRCOL1A6NCL2 159 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 H0Y8G0 127 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 KRTDAPP60985 99 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 DNAH11Q96DT5 4516 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 CST9LQ9H4G1 147 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms