RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PRELID3AQ96N28 172 aa7.96□□□□□ -1.14
SRP54-206ENST00000555317 SMIM2Q9BVW6 85 aa7.96□□□□□ -1.14
SRP54-206ENST00000555317 NPYP01303 97 aa7.95□□□□□ -1.14
SRP54-206ENST00000555317 RAB5AP20339 215 aa7.95□□□□□ -1.14
SRP54-206ENST00000555317 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
SRP54-206ENST00000555317 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
SRP54-206ENST00000555317 GAGE12HA6NDE8 117 aa7.94□□□□□ -1.14
SRP54-206ENST00000555317 CLRN3Q8NCR9 226 aa7.94□□□□□ -1.14
SRP54-206ENST00000555317 LAMTOR2Q9Y2Q5 125 aa7.94□□□□□ -1.14
SRP54-206ENST00000555317 hDV102S1A0JD36 115 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 RHEBQ15382 184 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 SS18Q15532 418 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 NDUFA5Q16718 116 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 CFAP161Q6P656 301 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 ZNF664Q8N3J9 261 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 CHCHD10Q8WYQ3 142 aaPredicted RBP7.93□□□□□ -1.14
SRP54-206ENST00000555317 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
SRP54-206ENST00000555317 HSPG2P98160 4391 aa7.92□□□□□ -1.14
SRP54-206ENST00000555317 XCL1P47992 114 aa7.92□□□□□ -1.14
SRP54-206ENST00000555317 KRTAP26-1Q6PEX3 210 aa7.92□□□□□ -1.14
SRP54-206ENST00000555317 RPS10P5Q9NQ39 176 aa7.92□□□□□ -1.14
SRP54-206ENST00000555317 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
SRP54-206ENST00000555317 CARHSP1Q9Y2V2 147 aaKnown RBP7.92□□□□□ -1.14
SRP54-206ENST00000555317 APOBP04114 4563 aaKnown RBP7.91□□□□□ -1.14
SRP54-206ENST00000555317 LOC389332A0A1B0GUA5 103 aa7.91□□□□□ -1.14
SRP54-206ENST00000555317 PRSS1P07477 247 aa7.91□□□□□ -1.14
SRP54-206ENST00000555317 UBE2D4Q9Y2X8 147 aa7.91□□□□□ -1.14
SRP54-206ENST00000555317 CSDC2Q9Y534 153 aaKnown RBP7.91□□□□□ -1.14
SRP54-206ENST00000555317 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.9□□□□□ -1.14
SRP54-206ENST00000555317 LINC00959A0A1B0GUT2 108 aa7.9□□□□□ -1.14
SRP54-206ENST00000555317 CCL25O15444 150 aa7.9□□□□□ -1.14
SRP54-206ENST00000555317 LINC01620Q4KN68 170 aa7.9□□□□□ -1.14
SRP54-206ENST00000555317 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
SRP54-206ENST00000555317 Q8N1X5 172 aa7.9□□□□□ -1.14
SRP54-206ENST00000555317 TIMM21Q9BVV7 248 aa7.9□□□□□ -1.14
SRP54-206ENST00000555317 SPANXA1Q9NS26 97 aa7.9□□□□□ -1.14
SRP54-206ENST00000555317 C1orf196B1AJZ1 125 aa7.89□□□□□ -1.15
SRP54-206ENST00000555317 APOC3P02656 99 aa7.89□□□□□ -1.15
SRP54-206ENST00000555317 XGP55808 180 aa7.89□□□□□ -1.15
SRP54-206ENST00000555317 RPL39P62891 51 aaKnown RBP7.89□□□□□ -1.15
SRP54-206ENST00000555317 COX19Q49B96 90 aa7.89□□□□□ -1.15
SRP54-206ENST00000555317 RNASE13Q5GAN3 156 aaKnown RBP7.89□□□□□ -1.15
SRP54-206ENST00000555317 TRAV13-1A0A0B4J241 112 aa7.88□□□□□ -1.15
SRP54-206ENST00000555317 SNAPINO95295 136 aa7.88□□□□□ -1.15
SRP54-206ENST00000555317 IFI27P40305 119 aaPredicted RBP7.88□□□□□ -1.15
SRP54-206ENST00000555317 HAMPP81172 84 aa7.88□□□□□ -1.15
SRP54-206ENST00000555317 Q6ZUT4 128 aa7.88□□□□□ -1.15
SRP54-206ENST00000555317 SVBPQ8N300 66 aa7.88□□□□□ -1.15
SRP54-206ENST00000555317 Q8N8P6 123 aa7.88□□□□□ -1.15
SRP54-206ENST00000555317 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
SRP54-206ENST00000555317 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
SRP54-206ENST00000555317 MALP21145 153 aa7.87□□□□□ -1.15
SRP54-206ENST00000555317 FOXI1Q12951 378 aa7.87□□□□□ -1.15
SRP54-206ENST00000555317 ORMDL2Q53FV1 153 aa7.87□□□□□ -1.15
SRP54-206ENST00000555317 CD164L2Q6UWJ8 174 aa7.87□□□□□ -1.15
SRP54-206ENST00000555317 GNB1LQ9BYB4 327 aa7.87□□□□□ -1.15
SRP54-206ENST00000555317 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
SRP54-206ENST00000555317 PRSS47A8MTI9 375 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 K7EMI3 77 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 MT-ND6P03923 174 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
SRP54-206ENST00000555317 KIAA1644Q3SXP7 199 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 C15orf56Q8N910 161 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 CYSLTR1Q9Y271 337 aa7.86□□□□□ -1.15
SRP54-206ENST00000555317 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 IGHV1-58A0A0C4DH39 117 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 COX7A2LO14548 114 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 SMR3BP02814 79 aaPredicted RBP7.85□□□□□ -1.15
SRP54-206ENST00000555317 G0S2P27469 103 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 MRPS36P82909 103 aaKnown RBP7.85□□□□□ -1.15
SRP54-206ENST00000555317 Q6ZSA8 131 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 C9orf163Q8N9P6 203 aa7.85□□□□□ -1.15
SRP54-206ENST00000555317 GVQW2A0A096LPI5 108 aaPredicted RBP7.84□□□□□ -1.15
SRP54-206ENST00000555317 FABP9Q0Z7S8 132 aa7.84□□□□□ -1.15
SRP54-206ENST00000555317 Q5VSD8 79 aa7.84□□□□□ -1.15
SRP54-206ENST00000555317 Q6ZN92 141 aa7.84□□□□□ -1.15
SRP54-206ENST00000555317 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 APOMO95445 188 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 C2orf66Q6UXQ4 117 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 TMEM141Q96I45 108 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 OPRPNQ99935 248 aaPredicted RBP7.83□□□□□ -1.16
SRP54-206ENST00000555317 C2orf88Q9BSF0 95 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 CHAC1Q9BUX1 264 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 MRPL18Q9H0U6 180 aaKnown RBP7.83□□□□□ -1.16
SRP54-206ENST00000555317 PYGO1Q9Y3Y4 419 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
SRP54-206ENST00000555317 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
SRP54-206ENST00000555317 TEX43Q6ZNM6 134 aa7.82□□□□□ -1.16
SRP54-206ENST00000555317 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
SRP54-206ENST00000555317 PKIGQ9Y2B9 76 aa7.82□□□□□ -1.16
SRP54-206ENST00000555317 IGLV4-3A0A075B6K6 122 aa7.81□□□□□ -1.16
SRP54-206ENST00000555317 TGIF2-C20orf24A0A0A6YYL0 155 aa7.81□□□□□ -1.16
SRP54-206ENST00000555317 PAPPA-AS1Q5QFB9 102 aa7.81□□□□□ -1.16
SRP54-206ENST00000555317 DPH3Q96FX2 82 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms