RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 LST1O00453 97 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 EBI3Q14213 229 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 PRIMA1Q86XR5 153 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 FAM218AQ96MZ4 157 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 IGHV4OR15-8A0A075B7B6 117 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 A0A087WW49 117 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 NDUFA4O00483 81 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 KIR2DL5BQ8NHK3 375 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 UBE2E2Q96LR5 201 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 C14orf132Q9NPU4 83 aa6.5□□□□□ -1.37
SYNE2-217ENST00000555022 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 ADORA2A-AS1P86434 159 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 C9orf129Q5T035 196 aaKnown RBP6.49□□□□□ -1.37
SYNE2-217ENST00000555022 APRG1Q8IVJ8 170 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 NRGNQ92686 78 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 DEFB131AP59861 70 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 VSIG2Q96IQ7 327 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 CFAP46Q8IYW2 2715 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 KLLNB2CW77 178 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 SOSTDC1Q6X4U4 206 aa6.49□□□□□ -1.37
SYNE2-217ENST00000555022 CITED2Q99967 270 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-217ENST00000555022 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
SYNE2-217ENST00000555022 DSCR8Q96T75 97 aa6.48□□□□□ -1.37
SYNE2-217ENST00000555022 LENEPQ9Y5L5 61 aa6.48□□□□□ -1.37
SYNE2-217ENST00000555022 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
SYNE2-217ENST00000555022 OR13C6PQ8NH95 151 aa6.48□□□□□ -1.37
SYNE2-217ENST00000555022 IGHV4-61A0A0C4DH41 118 aa6.48□□□□□ -1.37
SYNE2-217ENST00000555022 LMO4P61968 165 aa6.48□□□□□ -1.37
SYNE2-217ENST00000555022 HIST1H4AP62805 103 aaKnown RBP6.48□□□□□ -1.37
SYNE2-217ENST00000555022 LY6DQ14210 128 aa6.48□□□□□ -1.37
SYNE2-217ENST00000555022 FAM223BA6NKX1 122 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 PFN2P35080 140 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 TIRAPP58753 221 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 SNRPD3P62318 126 aaKnown RBP6.47□□□□□ -1.37
SYNE2-217ENST00000555022 FAM223AQ8IWN6 122 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 DCANP1Q8TF63 244 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 H3BT86 120 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 IGHV1-69P01742 117 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 RNF152Q8N8N0 203 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 XCL2Q9UBD3 114 aa6.47□□□□□ -1.37
SYNE2-217ENST00000555022 A0A0J9YX75 114 aa6.46□□□□□ -1.38
SYNE2-217ENST00000555022 IGHV4-59P01825 116 aa6.46□□□□□ -1.38
SYNE2-217ENST00000555022 C9orf85Q96MD7 179 aa6.46□□□□□ -1.38
SYNE2-217ENST00000555022 ACANP16112 2415 aa6.46□□□□□ -1.38
SYNE2-217ENST00000555022 NCR3O14931 201 aa6.45□□□□□ -1.38
SYNE2-217ENST00000555022 C11orf71Q6IPW1 123 aa6.45□□□□□ -1.38
SYNE2-217ENST00000555022 FAM19A4Q96LR4 140 aa6.45□□□□□ -1.38
SYNE2-217ENST00000555022 ANKRD17O75179 2603 aaKnown RBP6.45□□□□□ -1.38
SYNE2-217ENST00000555022 A0A1B0GX51 115 aa6.45□□□□□ -1.38
SYNE2-217ENST00000555022 C19orf84I3L1E1 186 aa6.45□□□□□ -1.38
SYNE2-217ENST00000555022 CIRBPQ14011 172 aaKnown RBP6.45□□□□□ -1.38
SYNE2-217ENST00000555022 FAM19A5Q7Z5A7 132 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-217ENST00000555022 CSDC2Q9Y534 153 aaKnown RBP6.45□□□□□ -1.38
SYNE2-217ENST00000555022 SLURP1P55000 103 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 TEX15Q9BXT5 2789 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 TRGV1A0A0A0MS02 117 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 DNAL4O96015 105 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 C3orf22Q8N5N4 141 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 AVPP01185 164 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 LINC00158P58513 81 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 HILS1P60008 231 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 MRPS36P82909 103 aaKnown RBP6.44□□□□□ -1.38
SYNE2-217ENST00000555022 CLPSL2Q6UWE3 100 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 CHCHD7Q9BUK0 85 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
SYNE2-217ENST00000555022 MED14OSP0DP75 135 aa6.43□□□□□ -1.38
SYNE2-217ENST00000555022 A0A087WYN8 130 aa6.43□□□□□ -1.38
SYNE2-217ENST00000555022 A0A1W2PRX2 142 aa6.43□□□□□ -1.38
SYNE2-217ENST00000555022 PLA2G2AP14555 144 aa6.43□□□□□ -1.38
SYNE2-217ENST00000555022 Q6Q795 121 aa6.43□□□□□ -1.38
SYNE2-217ENST00000555022 COX7A2LO14548 114 aa6.42□□□□□ -1.38
SYNE2-217ENST00000555022 HIVEP2P31629 2446 aa6.42□□□□□ -1.38
SYNE2-217ENST00000555022 LECT2O14960 151 aa6.42□□□□□ -1.38
SYNE2-217ENST00000555022 LOC100131303A0A0U1RQF7 123 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 C19orf54Q5BKX5 351 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 MIR7-3HGQ8N6C7 128 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 SPANXDQ9BXN6 97 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 SPANXCQ9NY87 97 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 RBMY1BA6NDE4 496 aaKnown RBP6.41□□□□□ -1.38
SYNE2-217ENST00000555022 RBMY1EA6NEQ0 496 aaKnown RBP6.41□□□□□ -1.38
SYNE2-217ENST00000555022 RBMY1DP0C7P1 496 aaKnown RBP6.41□□□□□ -1.38
SYNE2-217ENST00000555022 PRR3P79522 188 aaKnown RBP6.41□□□□□ -1.38
SYNE2-217ENST00000555022 HRCT1Q6UXD1 115 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 SETXQ7Z333 2677 aaKnown RBP6.41□□□□□ -1.38
SYNE2-217ENST00000555022 PAX4O43316 350 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 C10orf105Q8TEF2 133 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 APCP25054 2843 aa6.41□□□□□ -1.38
SYNE2-217ENST00000555022 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.38
SYNE2-217ENST00000555022 IGHV4-30-2A0A087WSY4 118 aa6.4□□□□□ -1.38
SYNE2-217ENST00000555022 CRPP02741 224 aa6.4□□□□□ -1.38
SYNE2-217ENST00000555022 LINC00242Q5T6M2 205 aa6.4□□□□□ -1.38
SYNE2-217ENST00000555022 USMG5Q96IX5 58 aa6.4□□□□□ -1.38
SYNE2-217ENST00000555022 PEMTQ9UBM1 199 aa6.4□□□□□ -1.38
SYNE2-217ENST00000555022 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms