RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 BTF3L4Q96K17 158 aa11.22□□□□□ -0.61
PRKCH-210ENST00000554835 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.61
PRKCH-210ENST00000554835 POLR2KP53803 58 aaKnown RBP11.21□□□□□ -0.61
PRKCH-210ENST00000554835 SYCNQ0VAF6 134 aa11.21□□□□□ -0.61
PRKCH-210ENST00000554835 REG3GQ6UW15 175 aa11.21□□□□□ -0.61
PRKCH-210ENST00000554835 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
PRKCH-210ENST00000554835 Q6ZRP5 223 aa11.21□□□□□ -0.61
PRKCH-210ENST00000554835 TAGLN2P37802 199 aaKnown RBP11.2□□□□□ -0.62
PRKCH-210ENST00000554835 PTTG1IPP53801 180 aa11.2□□□□□ -0.62
PRKCH-210ENST00000554835 FAM231DQ6ZW35 169 aa11.2□□□□□ -0.62
PRKCH-210ENST00000554835 MRPL52Q86TS9 123 aaKnown RBP11.2□□□□□ -0.62
PRKCH-210ENST00000554835 SLC51BQ86UW2 128 aa11.2□□□□□ -0.62
PRKCH-210ENST00000554835 MRAP2Q96G30 205 aa11.2□□□□□ -0.62
PRKCH-210ENST00000554835 ST20Q9HBF5 79 aa11.2□□□□□ -0.62
PRKCH-210ENST00000554835 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
PRKCH-210ENST00000554835 SS18Q15532 418 aa11.19□□□□□ -0.62
PRKCH-210ENST00000554835 ZNF664Q8N3J9 261 aa11.19□□□□□ -0.62
PRKCH-210ENST00000554835 A0A1W2PNN7 141 aa11.18□□□□□ -0.62
PRKCH-210ENST00000554835 A8MWL6 223 aa11.18□□□□□ -0.62
PRKCH-210ENST00000554835 CAMPP49913 170 aa11.18□□□□□ -0.62
PRKCH-210ENST00000554835 PKIGQ9Y2B9 76 aa11.18□□□□□ -0.62
PRKCH-210ENST00000554835 IGLV4-69A0A075B6H9 119 aa11.17□□□□□ -0.62
PRKCH-210ENST00000554835 TRBV27A0A0K0K1C4 114 aa11.17□□□□□ -0.62
PRKCH-210ENST00000554835 GAGE2BQ13066 116 aa11.17□□□□□ -0.62
PRKCH-210ENST00000554835 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
PRKCH-210ENST00000554835 RAB4AP20338 218 aa11.16□□□□□ -0.62
PRKCH-210ENST00000554835 CT83Q5H943 113 aa11.16□□□□□ -0.62
PRKCH-210ENST00000554835 TCTE3Q8IZS6 198 aa11.16□□□□□ -0.62
PRKCH-210ENST00000554835 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
PRKCH-210ENST00000554835 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
PRKCH-210ENST00000554835 C7orf77A4D0Y5 90 aa11.15□□□□□ -0.62
PRKCH-210ENST00000554835 NUP35Q8NFH5 326 aa11.15□□□□□ -0.62
PRKCH-210ENST00000554835 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
PRKCH-210ENST00000554835 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
PRKCH-210ENST00000554835 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
PRKCH-210ENST00000554835 FAM210AQ96ND0 272 aa11.14□□□□□ -0.63
PRKCH-210ENST00000554835 A0A1B0GUT8 65 aa11.13□□□□□ -0.63
PRKCH-210ENST00000554835 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
PRKCH-210ENST00000554835 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.13□□□□□ -0.63
PRKCH-210ENST00000554835 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
PRKCH-210ENST00000554835 PSORS1C2Q9UIG4 136 aa11.13□□□□□ -0.63
PRKCH-210ENST00000554835 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
PRKCH-210ENST00000554835 C1orf196B1AJZ1 125 aa11.12□□□□□ -0.63
PRKCH-210ENST00000554835 COX7A2LO14548 114 aa11.12□□□□□ -0.63
PRKCH-210ENST00000554835 C9orf116Q5BN46 136 aaPredicted RBP11.12□□□□□ -0.63
PRKCH-210ENST00000554835 APOMO95445 188 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 MALP21145 153 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 CEBPGP53567 150 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 NRACQ8N912 160 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 ISOC2Q96AB3 205 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
PRKCH-210ENST00000554835 CSDC2Q9Y534 153 aaKnown RBP11.11□□□□□ -0.63
PRKCH-210ENST00000554835 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
PRKCH-210ENST00000554835 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
PRKCH-210ENST00000554835 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
PRKCH-210ENST00000554835 VCYO14598 125 aa11.09□□□□□ -0.63
PRKCH-210ENST00000554835 ALKAL2Q6UX46 152 aa11.09□□□□□ -0.63
PRKCH-210ENST00000554835 PHF5AQ7RTV0 110 aaKnown RBP11.09□□□□□ -0.63
PRKCH-210ENST00000554835 C5orf38Q86SI9 138 aa11.09□□□□□ -0.63
PRKCH-210ENST00000554835 C2orf48Q96LS8 159 aa11.09□□□□□ -0.63
PRKCH-210ENST00000554835 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
PRKCH-210ENST00000554835 FCER1GP30273 86 aa11.08□□□□□ -0.64
PRKCH-210ENST00000554835 Q6ZUT4 128 aa11.08□□□□□ -0.64
PRKCH-210ENST00000554835 MT-ND6P03923 174 aa11.07□□□□□ -0.64
PRKCH-210ENST00000554835 SUMO2P61956 95 aaKnown RBP11.07□□□□□ -0.64
PRKCH-210ENST00000554835 BLOC1S1P78537 153 aa11.07□□□□□ -0.64
PRKCH-210ENST00000554835 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
PRKCH-210ENST00000554835 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
PRKCH-210ENST00000554835 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
PRKCH-210ENST00000554835 OSTCQ9NRP0 149 aa11.07□□□□□ -0.64
PRKCH-210ENST00000554835 V9GYV3 84 aa11.07□□□□□ -0.64
PRKCH-210ENST00000554835 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
PRKCH-210ENST00000554835 KRTAP11-1Q8IUC1 163 aa11.06□□□□□ -0.64
PRKCH-210ENST00000554835 SPAG11BQ08648 103 aa11.04□□□□□ -0.64
PRKCH-210ENST00000554835 RNF151Q2KHN1 245 aa11.04□□□□□ -0.64
PRKCH-210ENST00000554835 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
PRKCH-210ENST00000554835 RIGQ13278 110 aa11.03□□□□□ -0.64
PRKCH-210ENST00000554835 MRPL51Q4U2R6 128 aaKnown RBP11.03□□□□□ -0.64
PRKCH-210ENST00000554835 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
PRKCH-210ENST00000554835 KIR2DL4Q99706 377 aa11.03□□□□□ -0.64
PRKCH-210ENST00000554835 TIMM21Q9BVV7 248 aa11.03□□□□□ -0.64
PRKCH-210ENST00000554835 ZNF727A8MUV8 499 aa11.02□□□□□ -0.65
PRKCH-210ENST00000554835 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
PRKCH-210ENST00000554835 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.65
PRKCH-210ENST00000554835 C10orf25Q5T742 122 aa11.02□□□□□ -0.65
PRKCH-210ENST00000554835 EIF5A2Q9GZV4 153 aaKnown RBP11.02□□□□□ -0.65
PRKCH-210ENST00000554835 IGHV3OR16-9A0A0B4J2B5 98 aa11.01□□□□□ -0.65
PRKCH-210ENST00000554835 PPP1R17O96001 155 aa11.01□□□□□ -0.65
PRKCH-210ENST00000554835 IGLV7-43P04211 117 aa11.01□□□□□ -0.65
PRKCH-210ENST00000554835 SMAGPQ0VAQ4 97 aa11.01□□□□□ -0.65
PRKCH-210ENST00000554835 FAM104BQ5XKR9 115 aa11.01□□□□□ -0.65
PRKCH-210ENST00000554835 OR10D4PQ8NGN7 298 aa11.01□□□□□ -0.65
PRKCH-210ENST00000554835 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
PRKCH-210ENST00000554835 KRTAP7-1Q8IUC3 87 aa11□□□□□ -0.65
PRKCH-210ENST00000554835 ORAOV1Q8WV07 137 aa11□□□□□ -0.65
PRKCH-210ENST00000554835 MUC2Q02817 5179 aa11□□□□□ -0.65
PRKCH-210ENST00000554835 TRBV24-1A0A075B6N3 115 aa10.99□□□□□ -0.65
PRKCH-210ENST00000554835 PPP1R2P9O14990 202 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms