RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 LYPD2Q6UXB3 125 aa2.53□□□□□ -2
LRFN5-204ENST00000554171 DYNLRB2Q8TF09 96 aa2.53□□□□□ -2
LRFN5-204ENST00000554171 SHANK1Q9Y566 2161 aa2.53□□□□□ -2.01
LRFN5-204ENST00000554171 MUSTN1Q8IVN3 82 aa2.53□□□□□ -2.01
LRFN5-204ENST00000554171 TMEM105Q8N8V8 129 aa2.53□□□□□ -2.01
LRFN5-204ENST00000554171 IGHV3-43A0A0B4J1X8 118 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 CPSF4LA6NMK7 179 aaKnown RBP2.52□□□□□ -2.01
LRFN5-204ENST00000554171 IGHV4-39P01824 125 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 SPANXN1Q5VSR9 72 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 ORMDL3Q8N138 153 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 WFDC9Q8NEX5 89 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 MYO7AQ13402 2215 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 IGKV1OR2-108A0A075B7D4 117 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 IGKV3-11P04433 115 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 SVEP1Q4LDE5 3571 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 MYCBP2O75592 4640 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 ZNF407Q9C0G0 2248 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 IGHV3-35A0A0C4DH35 117 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 C15orf56Q8N910 161 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 R4GMQ9 66 aa2.52□□□□□ -2.01
LRFN5-204ENST00000554171 DNAH7Q8WXX0 4024 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 IGHV4-59P01825 116 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 LAMA1P25391 3075 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 CELA1Q9UNI1 258 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 MUC4Q99102 2169 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 IGLV2-23P01705 113 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 DSCR9P59020 149 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 PRR4Q16378 134 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 C1orf134Q5TEV5 83 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 LIMD2Q9BT23 127 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 ZNF815PA8K554 130 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 MIR17HGQ75NE6 70 aa2.51□□□□□ -2.01
LRFN5-204ENST00000554171 ZZEF1O43149 2961 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 FRYQ5TBA9 3013 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 CYSRT1A8MQ03 144 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 RPS18P62269 152 aaKnown RBP2.5□□□□□ -2.01
LRFN5-204ENST00000554171 KRTAP16-1A8MUX0 517 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 SMIM29Q86T20 159 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 DNAH6Q9C0G6 4158 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 ZNHIT1O43257 154 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 IGKV1-17P01599 117 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 LINC00483Q53H64 154 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 ENHOQ6UWT2 76 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 NPBQ8NG41 125 aa2.5□□□□□ -2.01
LRFN5-204ENST00000554171 IGKV3D-15A0A087WSY6 115 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 IGHV4-28A0A0C4DH34 117 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 SPTBP11277 2137 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 FSHBP01225 129 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 TMEM14CQ9P0S9 112 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 IGHV4-61A0A0C4DH41 118 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 A0A1B0GUT8 65 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 ELOF1P60002 83 aaKnown RBP2.49□□□□□ -2.01
LRFN5-204ENST00000554171 NDUFA4L2Q9NRX3 87 aa2.49□□□□□ -2.01
LRFN5-204ENST00000554171 SLPIP03973 132 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 CHTF8P0CG12 524 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 IAPPP10997 89 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 SPINK7P58062 85 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 RETNLBQ9BQ08 111 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 MALRD1Q5VYJ5 2156 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 SPRR4Q96PI1 79 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 TMEM167BQ9NRX6 74 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 CACNA1IQ9P0X4 2223 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 FRAS1Q86XX4 4008 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 A0A0J9YXY3 114 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 LINC01547P58512 204 aaPredicted RBP2.48□□□□□ -2.01
LRFN5-204ENST00000554171 IGHV4-4A0A075B6R2 117 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 ZNF137PP52743 207 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 XAGE1AQ9HD64 81 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 C8orf17Q9NRJ1 99 aa2.48□□□□□ -2.01
LRFN5-204ENST00000554171 M0R1W7 72 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 CMC4P56277 68 aaPredicted RBP2.47□□□□□ -2.01
LRFN5-204ENST00000554171 NREPQ16612 68 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 FREM1Q5H8C1 2179 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 LOC110117498A0A087WWA1 95 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 NDUFA3O95167 84 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 RPS27P42677 84 aaKnown RBP2.47□□□□□ -2.01
LRFN5-204ENST00000554171 CSAG1Q6PB30 78 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.47□□□□□ -2.01
LRFN5-204ENST00000554171 Q86TA4 180 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 CELSR3Q9NYQ7 3312 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 TRBV6-5A0A0K0K1A5 114 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 IGKV2-29A2NJV5 120 aaPredicted RBP2.47□□□□□ -2.01
LRFN5-204ENST00000554171 MIAQ16674 131 aa2.47□□□□□ -2.01
LRFN5-204ENST00000554171 FREM2Q5SZK8 3169 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 IGHV4-30-4P0DP06 118 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 C9orf163Q8N9P6 203 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 CELSR2Q9HCU4 2923 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 A0A1B0GVT2 93 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 M0R2N4 97 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 LECT2O14960 151 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 PRKDCP78527 4128 aaKnown RBP2.46□□□□□ -2.02
LRFN5-204ENST00000554171 IGHV3-73A0A0B4J1V6 119 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
LRFN5-204ENST00000554171 RNASE13Q5GAN3 156 aaKnown RBP2.46□□□□□ -2.02
LRFN5-204ENST00000554171 REG3GQ6UW15 175 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 MED13Q9UHV7 2174 aa2.46□□□□□ -2.02
LRFN5-204ENST00000554171 SPANXN5Q5MJ07 72 aa2.45□□□□□ -2.02
LRFN5-204ENST00000554171 NTM-AS1Q6ZSK4 140 aa2.45□□□□□ -2.02
LRFN5-204ENST00000554171 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms