RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 BORCS8Q96FH0 119 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 TTTY10Q9BZA0 68 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 MAP1LC3BQ9GZQ8 125 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 OR5AC2Q9NZP5 309 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 FLG2Q5D862 2391 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-210ENST00000553693 TRAV10A0A0B4J240 114 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 TSTD3H0UI37 97 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 CYB5AP00167 134 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 PRH1P02810 166 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 SMR3BP02814 79 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-210ENST00000553693 IGKV1-16P04430 117 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 BAALC-AS2P0C853 105 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 APELAP0DMC3 54 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 MGST1P10620 155 aaKnown RBP1.38□□□□□ -2.19
SCFD1-210ENST00000553693 CRYGAP11844 174 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 RBP2P50120 134 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 SMIM11AP58511 58 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 FXYD3Q14802 87 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 PLGLAQ15195 96 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 RPL13AP3Q6NVV1 102 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 Q8NDZ9 215 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 GRPEL2Q8TAA5 225 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 ARL11Q969Q4 196 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 ADAT3Q96EY9 351 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-210ENST00000553693 SLC25A21Q9BQT8 299 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-210ENST00000553693 SLC50A1Q9BRV3 221 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 PRADC1Q9BSG0 188 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 CMC2Q9NRP2 79 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 METTL1Q9UBP6 276 aaKnown RBP1.38□□□□□ -2.19
SCFD1-210ENST00000553693 OR52A1Q9UKL2 312 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 R4GMQ9 66 aa1.38□□□□□ -2.19
SCFD1-210ENST00000553693 TRGV2A0A075B6R0 118 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 DEFB131BA0A096LNP1 70 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 H3BUA1 57 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 GPR31O00270 319 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 FAM107AO95990 144 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 IFNA17P01571 189 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 IFNGP01579 166 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 ZNF705BP0CI00 300 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-210ENST00000553693 SRIP30626 198 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 RHOGP84095 191 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 PIGYQ3MUY2 71 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 MORN2Q502X0 79 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 RPL39P5Q59GN2 51 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 ZNF833PQ6ZTB9 187 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 AKAP14Q86UN6 197 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 COA5Q86WW8 74 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 UBE2DNLQ8IWF7 75 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 OR10AC1Q8NH08 325 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 OR4K15Q8NH41 348 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 USMG5Q96IX5 58 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 LINC00467Q9BRT7 94 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 NPCDR1Q9BY65 106 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 COA4Q9NYJ1 87 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 LAMTOR2Q9Y2Q5 125 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 LRP2P98164 4655 aa1.37□□□□□ -2.19
SCFD1-210ENST00000553693 LRP1Q07954 4544 aaKnown RBP1.37□□□□□ -2.19
SCFD1-210ENST00000553693 NBDYA0A0U1RRE5 68 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 LOC107986453A0A1B0GWG9 222 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 TMEM30CPA0ZSE6 113 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 BBIP1A8MTZ0 92 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 A8MWV9 139 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 GEMIN2O14893 280 aaKnown RBP1.36□□□□□ -2.19
SCFD1-210ENST00000553693 TIMM17BO60830 172 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 SCTP09683 121 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 SAA2P0DJI9 122 aaPredicted RBP1.36□□□□□ -2.19
SCFD1-210ENST00000553693 NDUFA6P56556 154 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 HAMPP81172 84 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 ESRGQ1W209 222 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 Q6ZQT0 140 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 NUP35Q8NFH5 326 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 OR51A4Q8NGJ6 313 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 OR10K1Q8NGX5 313 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 OR10J5Q8NHC4 309 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 PYDC1Q8WXC3 89 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 PP6455Q8WZ26 134 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 TAF9BQ9HBM6 251 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 C14orf132Q9NPU4 83 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 SAR1AQ9NR31 198 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 SPANXA1Q9NS26 97 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 TRAPPC2LQ9UL33 140 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 HSPB11Q9Y547 144 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 LY96Q9Y6Y9 160 aa1.36□□□□□ -2.19
SCFD1-210ENST00000553693 FAT3Q8TDW7 4589 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 IGKV3-7A0A075B6H7 116 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 TRAV1-1A0A0B4J248 108 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 A0A0G2JND7 137 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 FAM223BA6NKX1 122 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 IBA57-AS1B1ANH7 110 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 ZNF670-ZNF695F2Z2N8 137 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 TMEM256-PLSCR3K7ERE1 68 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 M0R129 80 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 YPEL1O60688 119 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 CST7O76096 145 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 TRGC2P03986 189 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 CTSDP07339 412 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-210ENST00000553693 PRB4P10163 310 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-210ENST00000553693 MIFP14174 115 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 TMBIM6P55061 237 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 RTL8BQ17RB0 113 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms