RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 BTF3L4Q96K17 158 aa6.3□□□□□ -1.4
ACTN1-208ENST00000553370 TRAV26-2A0A0B4J265 109 aa6.29□□□□□ -1.4
ACTN1-208ENST00000553370 NDUFS6O75380 124 aaKnown RBP6.29□□□□□ -1.4
ACTN1-208ENST00000553370 STPG4Q8N801 248 aa6.29□□□□□ -1.4
ACTN1-208ENST00000553370 C15orf56Q8N910 161 aa6.29□□□□□ -1.4
ACTN1-208ENST00000553370 CHCHD10Q8WYQ3 142 aaPredicted RBP6.29□□□□□ -1.4
ACTN1-208ENST00000553370 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
ACTN1-208ENST00000553370 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.28□□□□□ -1.4
ACTN1-208ENST00000553370 IGKV2-29A2NJV5 120 aaPredicted RBP6.28□□□□□ -1.4
ACTN1-208ENST00000553370 C19orf71A6NCJ1 209 aa6.28□□□□□ -1.4
ACTN1-208ENST00000553370 CTRLP40313 264 aa6.28□□□□□ -1.4
ACTN1-208ENST00000553370 BORCS7Q96B45 105 aa6.28□□□□□ -1.4
ACTN1-208ENST00000553370 RPP21Q9H633 154 aaKnown RBP6.28□□□□□ -1.4
ACTN1-208ENST00000553370 PLAC8Q9NZF1 115 aa6.28□□□□□ -1.4
ACTN1-208ENST00000553370 TRAV1-1A0A0B4J248 108 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 NCR2O95944 276 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 BCL2P10415 239 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 XCL1P47992 114 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 IFITM2Q01629 132 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 TEX261Q6UWH6 196 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
ACTN1-208ENST00000553370 SLPIP03973 132 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 FGF6P10767 208 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 PMCHP20382 165 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 PRR3P79522 188 aaKnown RBP6.26□□□□□ -1.41
ACTN1-208ENST00000553370 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 GATD1Q8NB37 220 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 OR5A1Q8NGJ0 315 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 PRSS3P2Q8NHM4 247 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 RPL39LQ96EH5 51 aaKnown RBP6.26□□□□□ -1.41
ACTN1-208ENST00000553370 CARD19Q96LW7 228 aa6.26□□□□□ -1.41
ACTN1-208ENST00000553370 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
ACTN1-208ENST00000553370 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
ACTN1-208ENST00000553370 H7C423 109 aa6.25□□□□□ -1.41
ACTN1-208ENST00000553370 ZNF25P17030 456 aaPredicted RBP6.25□□□□□ -1.41
ACTN1-208ENST00000553370 TAGLN2P37802 199 aaKnown RBP6.25□□□□□ -1.41
ACTN1-208ENST00000553370 CEBPGP53567 150 aa6.25□□□□□ -1.41
ACTN1-208ENST00000553370 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
ACTN1-208ENST00000553370 RNASE7Q9H1E1 156 aaKnown RBP6.25□□□□□ -1.41
ACTN1-208ENST00000553370 TRBV20OR9-2A0A075B6H5 130 aa6.24□□□□□ -1.41
ACTN1-208ENST00000553370 A0A096LNI7 61 aa6.24□□□□□ -1.41
ACTN1-208ENST00000553370 IGHV1-58A0A0C4DH39 117 aa6.24□□□□□ -1.41
ACTN1-208ENST00000553370 I3L3M4 83 aa6.24□□□□□ -1.41
ACTN1-208ENST00000553370 CCL25O15444 150 aa6.24□□□□□ -1.41
ACTN1-208ENST00000553370 GATCO43716 136 aaKnown RBP6.24□□□□□ -1.41
ACTN1-208ENST00000553370 SS18Q15532 418 aa6.24□□□□□ -1.41
ACTN1-208ENST00000553370 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
ACTN1-208ENST00000553370 ISOC2Q96AB3 205 aa6.23□□□□□ -1.41
ACTN1-208ENST00000553370 ST20Q9HBF5 79 aa6.23□□□□□ -1.41
ACTN1-208ENST00000553370 TMEM242Q9NWH2 141 aa6.23□□□□□ -1.41
ACTN1-208ENST00000553370 A8MWL6 223 aa6.22□□□□□ -1.41
ACTN1-208ENST00000553370 FCER1GP30273 86 aa6.22□□□□□ -1.41
ACTN1-208ENST00000553370 SMAGPQ0VAQ4 97 aa6.22□□□□□ -1.41
ACTN1-208ENST00000553370 LINC00526Q96FQ7 95 aa6.22□□□□□ -1.41
ACTN1-208ENST00000553370 CNFNQ9BYD5 112 aa6.22□□□□□ -1.41
ACTN1-208ENST00000553370 LINC00959A0A1B0GUT2 108 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 K7EN84 100 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.42
ACTN1-208ENST00000553370 RAB14P61106 215 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 SPINK6Q6UWN8 80 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 Q6ZRP5 223 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 OCC1Q8TAD7 63 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 LINC01600Q96MT4 127 aa6.21□□□□□ -1.42
ACTN1-208ENST00000553370 TNXBP22105 4242 aa6.2□□□□□ -1.42
ACTN1-208ENST00000553370 LOC107984640A0A0U1RRK4 108 aa6.2□□□□□ -1.42
ACTN1-208ENST00000553370 C7orf77A4D0Y5 90 aa6.2□□□□□ -1.42
ACTN1-208ENST00000553370 NDUFA5Q16718 116 aa6.2□□□□□ -1.42
ACTN1-208ENST00000553370 CLLU1Q5K131 121 aa6.2□□□□□ -1.42
ACTN1-208ENST00000553370 LRP2P98164 4655 aa6.2□□□□□ -1.42
ACTN1-208ENST00000553370 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
ACTN1-208ENST00000553370 COX7A2LO14548 114 aa6.19□□□□□ -1.42
ACTN1-208ENST00000553370 TSHBP01222 138 aa6.19□□□□□ -1.42
ACTN1-208ENST00000553370 MT-ND6P03923 174 aa6.19□□□□□ -1.42
ACTN1-208ENST00000553370 RPL18AQ02543 176 aaKnown RBP6.19□□□□□ -1.42
ACTN1-208ENST00000553370 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
ACTN1-208ENST00000553370 ALKAL2Q6UX46 152 aa6.19□□□□□ -1.42
ACTN1-208ENST00000553370 CAMK2N2Q96S95 79 aa6.19□□□□□ -1.42
ACTN1-208ENST00000553370 A0A1B0GUT8 65 aa6.18□□□□□ -1.42
ACTN1-208ENST00000553370 ZNF664Q8N3J9 261 aa6.18□□□□□ -1.42
ACTN1-208ENST00000553370 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 TRAV13-1A0A0B4J241 112 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 TRBV6-5A0A0K0K1A5 114 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 LINC00862A6NCI5 91 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 HIGD1CA8MV81 97 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 C1orf196B1AJZ1 125 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 TMEM250H0YL14 139 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 APOMO95445 188 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 FAM231DQ6ZW35 169 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 FAM210AQ96ND0 272 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 KIR2DL4Q99706 377 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 SMIM7Q9BQ49 75 aa6.17□□□□□ -1.42
ACTN1-208ENST00000553370 EIF5A2Q9GZV4 153 aaKnown RBP6.17□□□□□ -1.42
ACTN1-208ENST00000553370 FAM231BA6NCW3 169 aa6.16□□□□□ -1.42
ACTN1-208ENST00000553370 PPP1R17O96001 155 aa6.16□□□□□ -1.42
ACTN1-208ENST00000553370 RNASE13Q5GAN3 156 aaKnown RBP6.16□□□□□ -1.42
ACTN1-208ENST00000553370 MRPL52Q86TS9 123 aaKnown RBP6.16□□□□□ -1.42
ACTN1-208ENST00000553370 TMEM18Q96B42 140 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms