RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 LINC00862A6NCI5 91 aa8.31□□□□□ -1.08
ACTN1-207ENST00000553290 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
ACTN1-207ENST00000553290 PPP1R2P9O14990 202 aa8.31□□□□□ -1.08
ACTN1-207ENST00000553290 FCER1GP30273 86 aa8.31□□□□□ -1.08
ACTN1-207ENST00000553290 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
ACTN1-207ENST00000553290 SMAGPQ0VAQ4 97 aa8.31□□□□□ -1.08
ACTN1-207ENST00000553290 NRACQ8N912 160 aa8.31□□□□□ -1.08
ACTN1-207ENST00000553290 HERC1Q15751 4861 aa8.3□□□□□ -1.08
ACTN1-207ENST00000553290 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
ACTN1-207ENST00000553290 S100A8P05109 93 aa8.3□□□□□ -1.08
ACTN1-207ENST00000553290 CAMPP49913 170 aa8.3□□□□□ -1.08
ACTN1-207ENST00000553290 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-207ENST00000553290 MRPL51Q4U2R6 128 aaKnown RBP8.3□□□□□ -1.08
ACTN1-207ENST00000553290 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
ACTN1-207ENST00000553290 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
ACTN1-207ENST00000553290 J3QL48 77 aa8.29□□□□□ -1.08
ACTN1-207ENST00000553290 RPL37AP61513 92 aaKnown RBP8.29□□□□□ -1.08
ACTN1-207ENST00000553290 FOXI1Q12951 378 aa8.29□□□□□ -1.08
ACTN1-207ENST00000553290 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
ACTN1-207ENST00000553290 SS18Q15532 418 aa8.29□□□□□ -1.08
ACTN1-207ENST00000553290 ZNF664Q8N3J9 261 aa8.29□□□□□ -1.08
ACTN1-207ENST00000553290 C20orf78Q9BR46 151 aa8.29□□□□□ -1.08
ACTN1-207ENST00000553290 TRBV24-1A0A075B6N3 115 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-207ENST00000553290 F8W036 122 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 PANO1I0J062 215 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 TCAPO15273 167 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 CCL25O15444 150 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 CKS2P33552 79 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 XCL1P47992 114 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 DPH3Q96FX2 82 aa8.28□□□□□ -1.08
ACTN1-207ENST00000553290 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
ACTN1-207ENST00000553290 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.09
ACTN1-207ENST00000553290 RPL32P62910 135 aaKnown RBP8.27□□□□□ -1.09
ACTN1-207ENST00000553290 HBBP68871 147 aa8.27□□□□□ -1.09
ACTN1-207ENST00000553290 TMEM18Q96B42 140 aa8.27□□□□□ -1.09
ACTN1-207ENST00000553290 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
ACTN1-207ENST00000553290 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
ACTN1-207ENST00000553290 CD164L2Q6UWJ8 174 aa8.26□□□□□ -1.09
ACTN1-207ENST00000553290 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
ACTN1-207ENST00000553290 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 C1orf196B1AJZ1 125 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 TNFRSF6BO95407 300 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 PPBPP02775 128 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 RAB14P61106 215 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 COX6A2Q02221 97 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 TIMM21Q9BVV7 248 aa8.25□□□□□ -1.09
ACTN1-207ENST00000553290 A0A087WYN8 130 aa8.24□□□□□ -1.09
ACTN1-207ENST00000553290 D6R8Y8 96 aa8.24□□□□□ -1.09
ACTN1-207ENST00000553290 PHOX2AO14813 284 aa8.24□□□□□ -1.09
ACTN1-207ENST00000553290 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
ACTN1-207ENST00000553290 PNRC1Q12796 327 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-207ENST00000553290 ATP5L2Q7Z4Y8 100 aa8.24□□□□□ -1.09
ACTN1-207ENST00000553290 PKIGQ9Y2B9 76 aa8.24□□□□□ -1.09
ACTN1-207ENST00000553290 ZNF561-AS1K7EIQ3 104 aa8.23□□□□□ -1.09
ACTN1-207ENST00000553290 OXTP01178 125 aa8.23□□□□□ -1.09
ACTN1-207ENST00000553290 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
ACTN1-207ENST00000553290 SMIM2Q9BVW6 85 aa8.23□□□□□ -1.09
ACTN1-207ENST00000553290 COX7A2LO14548 114 aa8.22□□□□□ -1.09
ACTN1-207ENST00000553290 NPYP01303 97 aa8.22□□□□□ -1.09
ACTN1-207ENST00000553290 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
ACTN1-207ENST00000553290 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 MT-ND4LP03901 98 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 MALP21145 153 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.1
ACTN1-207ENST00000553290 ORMDL3Q8N138 153 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 ANAPC16Q96DE5 110 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 CARD19Q96LW7 228 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 LINC00474Q9P2X8 69 aa8.21□□□□□ -1.1
ACTN1-207ENST00000553290 IGKV2-24A0A0C4DH68 120 aa8.2□□□□□ -1.1
ACTN1-207ENST00000553290 RPL39P62891 51 aaKnown RBP8.2□□□□□ -1.1
ACTN1-207ENST00000553290 SYCNQ0VAF6 134 aa8.2□□□□□ -1.1
ACTN1-207ENST00000553290 TMEM136Q6ZRR5 245 aa8.2□□□□□ -1.1
ACTN1-207ENST00000553290 Q6ZUT4 128 aa8.2□□□□□ -1.1
ACTN1-207ENST00000553290 C7orf33Q8WU49 177 aa8.2□□□□□ -1.1
ACTN1-207ENST00000553290 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
ACTN1-207ENST00000553290 SPANXA1Q9NS26 97 aa8.2□□□□□ -1.1
ACTN1-207ENST00000553290 A0A096LNI7 61 aa8.19□□□□□ -1.1
ACTN1-207ENST00000553290 RAB5AP20339 215 aa8.19□□□□□ -1.1
ACTN1-207ENST00000553290 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
ACTN1-207ENST00000553290 PRELID3AQ96N28 172 aa8.19□□□□□ -1.1
ACTN1-207ENST00000553290 PKHD1L1Q86WI1 4243 aa8.18□□□□□ -1.1
ACTN1-207ENST00000553290 APOMO95445 188 aa8.18□□□□□ -1.1
ACTN1-207ENST00000553290 HNRNPA3P51991 378 aaKnown RBP8.18□□□□□ -1.1
ACTN1-207ENST00000553290 CLLU1Q5K131 121 aa8.18□□□□□ -1.1
ACTN1-207ENST00000553290 STPG4Q8N801 248 aa8.18□□□□□ -1.1
ACTN1-207ENST00000553290 LAMTOR2Q9Y2Q5 125 aa8.18□□□□□ -1.1
ACTN1-207ENST00000553290 IGLV4-69A0A075B6H9 119 aa8.17□□□□□ -1.1
ACTN1-207ENST00000553290 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
ACTN1-207ENST00000553290 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
ACTN1-207ENST00000553290 FAM104AQ969W3 186 aa8.17□□□□□ -1.1
ACTN1-207ENST00000553290 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
ACTN1-207ENST00000553290 Q6ZRU5 148 aa8.16□□□□□ -1.1
ACTN1-207ENST00000553290 C2orf48Q96LS8 159 aa8.16□□□□□ -1.1
ACTN1-207ENST00000553290 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
ACTN1-207ENST00000553290 LOC107984640A0A0U1RRK4 108 aa8.15□□□□□ -1.1
ACTN1-207ENST00000553290 IFI27P40305 119 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms