RNA–Protein interactions for RNA: ENST00000552917.1

RFX4-212, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-212ENST00000552917 CKS2P33552 79 aa7.9□□□□□ -1.14
RFX4-212ENST00000552917 HBBP68871 147 aa7.9□□□□□ -1.14
RFX4-212ENST00000552917 MRPL54Q6P161 138 aaKnown RBP7.9□□□□□ -1.14
RFX4-212ENST00000552917 KIR2DL4Q99706 377 aa7.9□□□□□ -1.14
RFX4-212ENST00000552917 A0A1B0GXF2 115 aa7.89□□□□□ -1.15
RFX4-212ENST00000552917 F8W036 122 aa7.89□□□□□ -1.15
RFX4-212ENST00000552917 PNRC1Q12796 327 aaPredicted RBP7.89□□□□□ -1.15
RFX4-212ENST00000552917 SDIM1Q6ZPB5 146 aa7.89□□□□□ -1.15
RFX4-212ENST00000552917 C20orf78Q9BR46 151 aa7.89□□□□□ -1.15
RFX4-212ENST00000552917 CDC42SE2Q9NRR3 84 aa7.89□□□□□ -1.15
RFX4-212ENST00000552917 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
RFX4-212ENST00000552917 TRBV24-1A0A075B6N3 115 aa7.88□□□□□ -1.15
RFX4-212ENST00000552917 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
RFX4-212ENST00000552917 SLPIP03973 132 aa7.88□□□□□ -1.15
RFX4-212ENST00000552917 RPL32P62910 135 aaKnown RBP7.88□□□□□ -1.15
RFX4-212ENST00000552917 SMAGPQ0VAQ4 97 aa7.88□□□□□ -1.15
RFX4-212ENST00000552917 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
RFX4-212ENST00000552917 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
RFX4-212ENST00000552917 VPS13BQ7Z7G8 4022 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 TNFRSF6BO95407 300 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 PPBPP02775 128 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 XCL1P47992 114 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 FOXI1Q12951 378 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 SS18Q15532 418 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 CLLU1Q5K131 121 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 ATP5L2Q7Z4Y8 100 aa7.87□□□□□ -1.15
RFX4-212ENST00000552917 CSDC2Q9Y534 153 aaKnown RBP7.87□□□□□ -1.15
RFX4-212ENST00000552917 IGHV3-64A0A075B6Q5 118 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 D6R8Y8 96 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 TCAPO15273 167 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 CCL25O15444 150 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 MT-ND4LP03901 98 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 TMEM18Q96B42 140 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 UBE2D4Q9Y2X8 147 aa7.86□□□□□ -1.15
RFX4-212ENST00000552917 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.86□□□□□ -1.15
RFX4-212ENST00000552917 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
RFX4-212ENST00000552917 PHOX2AO14813 284 aa7.85□□□□□ -1.15
RFX4-212ENST00000552917 ANAPC16Q96DE5 110 aa7.85□□□□□ -1.15
RFX4-212ENST00000552917 SMIM2Q9BVW6 85 aa7.85□□□□□ -1.15
RFX4-212ENST00000552917 C1orf196B1AJZ1 125 aa7.84□□□□□ -1.15
RFX4-212ENST00000552917 PANO1I0J062 215 aa7.84□□□□□ -1.15
RFX4-212ENST00000552917 NPYP01303 97 aa7.84□□□□□ -1.15
RFX4-212ENST00000552917 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
RFX4-212ENST00000552917 ORMDL3Q8N138 153 aa7.84□□□□□ -1.15
RFX4-212ENST00000552917 TIMM21Q9BVV7 248 aa7.84□□□□□ -1.15
RFX4-212ENST00000552917 FLG2Q5D862 2391 aaPredicted RBP7.84□□□□□ -1.15
RFX4-212ENST00000552917 IGHV1-58A0A0C4DH39 117 aa7.83□□□□□ -1.16
RFX4-212ENST00000552917 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
RFX4-212ENST00000552917 TMEM136Q6ZRR5 245 aa7.83□□□□□ -1.16
RFX4-212ENST00000552917 MYCBP2O75592 4640 aa7.82□□□□□ -1.16
RFX4-212ENST00000552917 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
RFX4-212ENST00000552917 RNASE13Q5GAN3 156 aaKnown RBP7.82□□□□□ -1.16
RFX4-212ENST00000552917 DPH3Q96FX2 82 aa7.82□□□□□ -1.16
RFX4-212ENST00000552917 PRELID3AQ96N28 172 aa7.82□□□□□ -1.16
RFX4-212ENST00000552917 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
RFX4-212ENST00000552917 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
RFX4-212ENST00000552917 IFITM2Q01629 132 aa7.81□□□□□ -1.16
RFX4-212ENST00000552917 COX6A2Q02221 97 aa7.81□□□□□ -1.16
RFX4-212ENST00000552917 UQCC3Q6UW78 93 aa7.81□□□□□ -1.16
RFX4-212ENST00000552917 Q6ZUT4 128 aa7.81□□□□□ -1.16
RFX4-212ENST00000552917 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
RFX4-212ENST00000552917 COX7A2LO14548 114 aa7.8□□□□□ -1.16
RFX4-212ENST00000552917 CHTF8P0CG12 524 aa7.8□□□□□ -1.16
RFX4-212ENST00000552917 RAB5AP20339 215 aa7.8□□□□□ -1.16
RFX4-212ENST00000552917 MALP21145 153 aa7.8□□□□□ -1.16
RFX4-212ENST00000552917 RPL37AP61513 92 aaKnown RBP7.8□□□□□ -1.16
RFX4-212ENST00000552917 PRSS3P2Q8NHM4 247 aa7.8□□□□□ -1.16
RFX4-212ENST00000552917 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
RFX4-212ENST00000552917 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
RFX4-212ENST00000552917 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
RFX4-212ENST00000552917 A0A087WYN8 130 aa7.79□□□□□ -1.16
RFX4-212ENST00000552917 TMEM218A2RU14 115 aa7.79□□□□□ -1.16
RFX4-212ENST00000552917 PRSS47A8MTI9 375 aa7.79□□□□□ -1.16
RFX4-212ENST00000552917 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
RFX4-212ENST00000552917 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
RFX4-212ENST00000552917 IMMP2LQ96T52 175 aa7.79□□□□□ -1.16
RFX4-212ENST00000552917 ADCYAP1P18509 176 aa7.78□□□□□ -1.16
RFX4-212ENST00000552917 MRPS36P82909 103 aaKnown RBP7.78□□□□□ -1.16
RFX4-212ENST00000552917 FAM104AQ969W3 186 aa7.78□□□□□ -1.16
RFX4-212ENST00000552917 CARD19Q96LW7 228 aa7.78□□□□□ -1.16
RFX4-212ENST00000552917 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
RFX4-212ENST00000552917 PKIGQ9Y2B9 76 aa7.78□□□□□ -1.16
RFX4-212ENST00000552917 HERC1Q15751 4861 aa7.78□□□□□ -1.16
RFX4-212ENST00000552917 LOC389332A0A1B0GUA5 103 aa7.77□□□□□ -1.17
RFX4-212ENST00000552917 J3QL48 77 aa7.77□□□□□ -1.17
RFX4-212ENST00000552917 SYCNQ0VAF6 134 aa7.77□□□□□ -1.17
RFX4-212ENST00000552917 C5orf38Q86SI9 138 aa7.77□□□□□ -1.17
RFX4-212ENST00000552917 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
RFX4-212ENST00000552917 CTDSP1Q9GZU7 261 aa7.77□□□□□ -1.17
RFX4-212ENST00000552917 PLAC8Q9NZF1 115 aa7.77□□□□□ -1.17
RFX4-212ENST00000552917 IGKV2-24A0A0C4DH68 120 aa7.76□□□□□ -1.17
RFX4-212ENST00000552917 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
RFX4-212ENST00000552917 APOMO95445 188 aa7.76□□□□□ -1.17
RFX4-212ENST00000552917 IFI27P40305 119 aaPredicted RBP7.76□□□□□ -1.17
RFX4-212ENST00000552917 MAJINQ3KP22 176 aa7.76□□□□□ -1.17
RFX4-212ENST00000552917 SEC11CQ9BY50 192 aa7.76□□□□□ -1.17
RFX4-212ENST00000552917 PYGO1Q9Y3Y4 419 aa7.76□□□□□ -1.17
RFX4-212ENST00000552917 IGLV4-69A0A075B6H9 119 aa7.75□□□□□ -1.17
RFX4-212ENST00000552917 IFITM10A6NMD0 228 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms