RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 C14orf177Q52M58 125 aa9.15□□□□□ -0.94
DDX54-210ENST00000552375 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.94
DDX54-210ENST00000552375 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.94
DDX54-210ENST00000552375 RNASE13Q5GAN3 156 aaKnown RBP9.14□□□□□ -0.95
DDX54-210ENST00000552375 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
DDX54-210ENST00000552375 BTF3L4Q96K17 158 aa9.14□□□□□ -0.95
DDX54-210ENST00000552375 PRELID3AQ96N28 172 aa9.14□□□□□ -0.95
DDX54-210ENST00000552375 KIR2DL4Q99706 377 aa9.14□□□□□ -0.95
DDX54-210ENST00000552375 GAGE12HA6NDE8 117 aa9.13□□□□□ -0.95
DDX54-210ENST00000552375 H7C423 109 aa9.13□□□□□ -0.95
DDX54-210ENST00000552375 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
DDX54-210ENST00000552375 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
DDX54-210ENST00000552375 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
DDX54-210ENST00000552375 LOC389332A0A1B0GUA5 103 aa9.12□□□□□ -0.95
DDX54-210ENST00000552375 TCAPO15273 167 aa9.12□□□□□ -0.95
DDX54-210ENST00000552375 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
DDX54-210ENST00000552375 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
DDX54-210ENST00000552375 C20orf78Q9BR46 151 aa9.12□□□□□ -0.95
DDX54-210ENST00000552375 CTDSP1Q9GZU7 261 aa9.12□□□□□ -0.95
DDX54-210ENST00000552375 RPS10P5Q9NQ39 176 aa9.12□□□□□ -0.95
DDX54-210ENST00000552375 TRBV24-1A0A075B6N3 115 aa9.11□□□□□ -0.95
DDX54-210ENST00000552375 TRAV8-4A0A0B4J246 113 aa9.11□□□□□ -0.95
DDX54-210ENST00000552375 PRSS1P07477 247 aa9.11□□□□□ -0.95
DDX54-210ENST00000552375 RPL39P62891 51 aaKnown RBP9.11□□□□□ -0.95
DDX54-210ENST00000552375 LINC00528Q8N1L1 170 aa9.11□□□□□ -0.95
DDX54-210ENST00000552375 CHCHD10Q8WYQ3 142 aaPredicted RBP9.11□□□□□ -0.95
DDX54-210ENST00000552375 CARHSP1Q9Y2V2 147 aaKnown RBP9.11□□□□□ -0.95
DDX54-210ENST00000552375 PPBPP02775 128 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 S100PP25815 95 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 Q6ZUT4 128 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 CLRN3Q8NCR9 226 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 IMMP2LQ96T52 175 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 CHAC1Q9BUX1 264 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
DDX54-210ENST00000552375 APOC3P02656 99 aa9.09□□□□□ -0.95
DDX54-210ENST00000552375 XCL1P47992 114 aa9.09□□□□□ -0.95
DDX54-210ENST00000552375 RPL32P62910 135 aaKnown RBP9.09□□□□□ -0.95
DDX54-210ENST00000552375 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
DDX54-210ENST00000552375 C10orf91Q5T1B1 145 aa9.09□□□□□ -0.95
DDX54-210ENST00000552375 MRPL52Q86TS9 123 aaKnown RBP9.09□□□□□ -0.95
DDX54-210ENST00000552375 hDV102S1A0JD36 115 aa9.08□□□□□ -0.96
DDX54-210ENST00000552375 PHOX2AO14813 284 aa9.08□□□□□ -0.96
DDX54-210ENST00000552375 CCL25O15444 150 aa9.08□□□□□ -0.96
DDX54-210ENST00000552375 PLA2G1BP04054 148 aaKnown RBP9.08□□□□□ -0.96
DDX54-210ENST00000552375 HIGD2BQ4VC39 106 aa9.08□□□□□ -0.96
DDX54-210ENST00000552375 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
DDX54-210ENST00000552375 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
DDX54-210ENST00000552375 CDC42SE2Q9NRR3 84 aa9.08□□□□□ -0.96
DDX54-210ENST00000552375 LINC00959A0A1B0GUT2 108 aa9.07□□□□□ -0.96
DDX54-210ENST00000552375 RHEBQ15382 184 aa9.07□□□□□ -0.96
DDX54-210ENST00000552375 C15orf56Q8N910 161 aa9.07□□□□□ -0.96
DDX54-210ENST00000552375 RAB5AP20339 215 aa9.06□□□□□ -0.96
DDX54-210ENST00000552375 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
DDX54-210ENST00000552375 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
DDX54-210ENST00000552375 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
DDX54-210ENST00000552375 TRAV9-1A0A075B6T8 112 aa9.05□□□□□ -0.96
DDX54-210ENST00000552375 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
DDX54-210ENST00000552375 SMAGPQ0VAQ4 97 aa9.05□□□□□ -0.96
DDX54-210ENST00000552375 FOXI1Q12951 378 aa9.05□□□□□ -0.96
DDX54-210ENST00000552375 SS18Q15532 418 aa9.05□□□□□ -0.96
DDX54-210ENST00000552375 NDUFA5Q16718 116 aa9.04□□□□□ -0.96
DDX54-210ENST00000552375 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
DDX54-210ENST00000552375 TGIF2-C20orf24A0A0A6YYL0 155 aa9.03□□□□□ -0.96
DDX54-210ENST00000552375 Q8N8P6 123 aa9.03□□□□□ -0.96
DDX54-210ENST00000552375 C9orf163Q8N9P6 203 aa9.03□□□□□ -0.96
DDX54-210ENST00000552375 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
DDX54-210ENST00000552375 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
DDX54-210ENST00000552375 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.97
DDX54-210ENST00000552375 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.97
DDX54-210ENST00000552375 TIMM21Q9BVV7 248 aa9.02□□□□□ -0.97
DDX54-210ENST00000552375 MRPL18Q9H0U6 180 aaKnown RBP9.02□□□□□ -0.97
DDX54-210ENST00000552375 CSDC2Q9Y534 153 aaKnown RBP9.02□□□□□ -0.97
DDX54-210ENST00000552375 IFITM10A6NMD0 228 aa9.01□□□□□ -0.97
DDX54-210ENST00000552375 SNAPINO95295 136 aa9.01□□□□□ -0.97
DDX54-210ENST00000552375 SLPIP03973 132 aa9.01□□□□□ -0.97
DDX54-210ENST00000552375 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
DDX54-210ENST00000552375 SVBPQ8N300 66 aa9.01□□□□□ -0.97
DDX54-210ENST00000552375 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
DDX54-210ENST00000552375 GNB1LQ9BYB4 327 aa9.01□□□□□ -0.97
DDX54-210ENST00000552375 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
DDX54-210ENST00000552375 LRP1Q07954 4544 aaKnown RBP9.01□□□□□ -0.97
DDX54-210ENST00000552375 PRSS47A8MTI9 375 aa9□□□□□ -0.97
DDX54-210ENST00000552375 FABP9Q0Z7S8 132 aa9□□□□□ -0.97
DDX54-210ENST00000552375 CFAP161Q6P656 301 aa9□□□□□ -0.97
DDX54-210ENST00000552375 CD164L2Q6UWJ8 174 aa9□□□□□ -0.97
DDX54-210ENST00000552375 SLC7A5P1Q8MH63 180 aa9□□□□□ -0.97
DDX54-210ENST00000552375 FAT3Q8TDW7 4589 aa8.99□□□□□ -0.97
DDX54-210ENST00000552375 IGLV4-3A0A075B6K6 122 aa8.99□□□□□ -0.97
DDX54-210ENST00000552375 ZC2HC1BQ5TFG8 222 aa8.99□□□□□ -0.97
DDX54-210ENST00000552375 C2orf66Q6UXQ4 117 aa8.99□□□□□ -0.97
DDX54-210ENST00000552375 C5orf38Q86SI9 138 aa8.99□□□□□ -0.97
DDX54-210ENST00000552375 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
DDX54-210ENST00000552375 CYSLTR1Q9Y271 337 aa8.99□□□□□ -0.97
DDX54-210ENST00000552375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
DDX54-210ENST00000552375 GVQW2A0A096LPI5 108 aaPredicted RBP8.98□□□□□ -0.97
DDX54-210ENST00000552375 IGHV1-58A0A0C4DH39 117 aa8.98□□□□□ -0.97
DDX54-210ENST00000552375 C1orf196B1AJZ1 125 aa8.98□□□□□ -0.97
DDX54-210ENST00000552375 COX7A2LO14548 114 aa8.98□□□□□ -0.97
DDX54-210ENST00000552375 MALP21145 153 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms