RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 NPYP01303 97 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 FCER1GP30273 86 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 HAMPP81172 84 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 OR5A1Q8NGJ0 315 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 TMEM101Q96IK0 257 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 BTF3L4Q96K17 158 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 SEC11CQ9BY50 192 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 DGAT2L7PQ6IED9 249 aa12.59□□□□□ -0.39
GPN3-210ENST00000552180 CLRN3Q8NCR9 226 aa12.59□□□□□ -0.39
GPN3-210ENST00000552180 IMMP2LQ96T52 175 aa12.59□□□□□ -0.39
GPN3-210ENST00000552180 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
GPN3-210ENST00000552180 GAGE12HA6NDE8 117 aa12.58□□□□□ -0.4
GPN3-210ENST00000552180 TMEM136Q6ZRR5 245 aa12.58□□□□□ -0.4
GPN3-210ENST00000552180 ORMDL3Q8N138 153 aa12.58□□□□□ -0.4
GPN3-210ENST00000552180 CHCHD10Q8WYQ3 142 aaPredicted RBP12.58□□□□□ -0.4
GPN3-210ENST00000552180 CSDC2Q9Y534 153 aaKnown RBP12.58□□□□□ -0.4
GPN3-210ENST00000552180 LINC00959A0A1B0GUT2 108 aa12.57□□□□□ -0.4
GPN3-210ENST00000552180 C10orf91Q5T1B1 145 aa12.57□□□□□ -0.4
GPN3-210ENST00000552180 ZNF664Q8N3J9 261 aa12.57□□□□□ -0.4
GPN3-210ENST00000552180 CTDSP1Q9GZU7 261 aa12.57□□□□□ -0.4
GPN3-210ENST00000552180 UBE2D4Q9Y2X8 147 aa12.57□□□□□ -0.4
GPN3-210ENST00000552180 PRELID3AQ96N28 172 aa12.56□□□□□ -0.4
GPN3-210ENST00000552180 PRSS47A8MTI9 375 aa12.55□□□□□ -0.4
GPN3-210ENST00000552180 TCAPO15273 167 aa12.55□□□□□ -0.4
GPN3-210ENST00000552180 SMR3BP02814 79 aaPredicted RBP12.55□□□□□ -0.4
GPN3-210ENST00000552180 FOXI1Q12951 378 aa12.55□□□□□ -0.4
GPN3-210ENST00000552180 C15orf56Q8N910 161 aa12.55□□□□□ -0.4
GPN3-210ENST00000552180 C9orf163Q8N9P6 203 aa12.55□□□□□ -0.4
GPN3-210ENST00000552180 TIMM21Q9BVV7 248 aa12.55□□□□□ -0.4
GPN3-210ENST00000552180 SLPIP03973 132 aa12.54□□□□□ -0.4
GPN3-210ENST00000552180 CNBPP62633 177 aaKnown RBP12.54□□□□□ -0.4
GPN3-210ENST00000552180 SRRM2Q9UQ35 2752 aaKnown RBP12.53□□□□□ -0.4
GPN3-210ENST00000552180 EPM2AB3EWF7 344 aa12.53□□□□□ -0.4
GPN3-210ENST00000552180 FAM104AQ969W3 186 aa12.53□□□□□ -0.4
GPN3-210ENST00000552180 LAMTOR2Q9Y2Q5 125 aa12.53□□□□□ -0.4
GPN3-210ENST00000552180 hDV102S1A0JD36 115 aa12.52□□□□□ -0.41
GPN3-210ENST00000552180 CCL25O15444 150 aa12.52□□□□□ -0.41
GPN3-210ENST00000552180 RPL39P62891 51 aaKnown RBP12.52□□□□□ -0.41
GPN3-210ENST00000552180 SMAGPQ0VAQ4 97 aa12.52□□□□□ -0.41
GPN3-210ENST00000552180 CARHSP1Q9Y2V2 147 aaKnown RBP12.52□□□□□ -0.41
GPN3-210ENST00000552180 TRAV9-1A0A075B6T8 112 aa12.51□□□□□ -0.41
GPN3-210ENST00000552180 XCL1P47992 114 aa12.51□□□□□ -0.41
GPN3-210ENST00000552180 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
GPN3-210ENST00000552180 TMEM18Q96B42 140 aa12.51□□□□□ -0.41
GPN3-210ENST00000552180 SS18Q15532 418 aa12.5□□□□□ -0.41
GPN3-210ENST00000552180 Q5VSD8 79 aa12.5□□□□□ -0.41
GPN3-210ENST00000552180 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
GPN3-210ENST00000552180 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
GPN3-210ENST00000552180 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
GPN3-210ENST00000552180 CD164L2Q6UWJ8 174 aa12.49□□□□□ -0.41
GPN3-210ENST00000552180 Q6ZUT4 128 aa12.49□□□□□ -0.41
GPN3-210ENST00000552180 SCXQ7RTU7 201 aa12.49□□□□□ -0.41
GPN3-210ENST00000552180 GVQW2A0A096LPI5 108 aaPredicted RBP12.47□□□□□ -0.41
GPN3-210ENST00000552180 LOC389332A0A1B0GUA5 103 aa12.47□□□□□ -0.41
GPN3-210ENST00000552180 C1orf196B1AJZ1 125 aa12.47□□□□□ -0.41
GPN3-210ENST00000552180 RAB5AP20339 215 aa12.47□□□□□ -0.41
GPN3-210ENST00000552180 MAP1LC3AQ9H492 121 aa12.47□□□□□ -0.41
GPN3-210ENST00000552180 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
GPN3-210ENST00000552180 AP5S1Q9NUS5 200 aa12.47□□□□□ -0.41
GPN3-210ENST00000552180 MRPS36P82909 103 aaKnown RBP12.46□□□□□ -0.41
GPN3-210ENST00000552180 HIGD2BQ4VC39 106 aa12.46□□□□□ -0.41
GPN3-210ENST00000552180 Q8N8P6 123 aa12.46□□□□□ -0.41
GPN3-210ENST00000552180 CIRBP-AS1Q8TBR5 109 aa12.46□□□□□ -0.41
GPN3-210ENST00000552180 OPRPNQ99935 248 aaPredicted RBP12.46□□□□□ -0.41
GPN3-210ENST00000552180 FAM229AH3BQW9 127 aa12.45□□□□□ -0.42
GPN3-210ENST00000552180 RHEBQ15382 184 aa12.45□□□□□ -0.42
GPN3-210ENST00000552180 TRAV13-1A0A0B4J241 112 aa12.44□□□□□ -0.42
GPN3-210ENST00000552180 PANO1I0J062 215 aa12.44□□□□□ -0.42
GPN3-210ENST00000552180 S100PP25815 95 aa12.44□□□□□ -0.42
GPN3-210ENST00000552180 KIAA1644Q3SXP7 199 aa12.44□□□□□ -0.42
GPN3-210ENST00000552180 GNB1LQ9BYB4 327 aa12.44□□□□□ -0.42
GPN3-210ENST00000552180 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.44□□□□□ -0.42
GPN3-210ENST00000552180 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.43□□□□□ -0.42
GPN3-210ENST00000552180 IGHV1-58A0A0C4DH39 117 aa12.43□□□□□ -0.42
GPN3-210ENST00000552180 RPS10P5Q9NQ39 176 aa12.43□□□□□ -0.42
GPN3-210ENST00000552180 PYGO1Q9Y3Y4 419 aa12.43□□□□□ -0.42
GPN3-210ENST00000552180 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
GPN3-210ENST00000552180 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
GPN3-210ENST00000552180 LINC00528Q8N1L1 170 aa12.41□□□□□ -0.42
GPN3-210ENST00000552180 MYCBP2O75592 4640 aa12.41□□□□□ -0.42
GPN3-210ENST00000552180 K7EMI3 77 aa12.4□□□□□ -0.42
GPN3-210ENST00000552180 COX7A2LO14548 114 aa12.4□□□□□ -0.42
GPN3-210ENST00000552180 IFI27P40305 119 aaPredicted RBP12.4□□□□□ -0.42
GPN3-210ENST00000552180 LINC00526Q96FQ7 95 aa12.4□□□□□ -0.42
GPN3-210ENST00000552180 NXT2Q9NPJ8 142 aaKnown RBP12.4□□□□□ -0.42
GPN3-210ENST00000552180 IGLV4-3A0A075B6K6 122 aa12.39□□□□□ -0.43
GPN3-210ENST00000552180 INAFM2P0DMQ5 153 aa12.39□□□□□ -0.43
GPN3-210ENST00000552180 APOC3P02656 99 aa12.38□□□□□ -0.43
GPN3-210ENST00000552180 COX19Q49B96 90 aa12.38□□□□□ -0.43
GPN3-210ENST00000552180 ORMDL2Q53FV1 153 aa12.38□□□□□ -0.43
GPN3-210ENST00000552180 C2orf66Q6UXQ4 117 aa12.38□□□□□ -0.43
GPN3-210ENST00000552180 C5orf38Q86SI9 138 aa12.38□□□□□ -0.43
GPN3-210ENST00000552180 ALKBH7Q9BT30 221 aaPredicted RBP12.38□□□□□ -0.43
GPN3-210ENST00000552180 IGHV3OR16-9A0A0B4J2B5 98 aa12.37□□□□□ -0.43
GPN3-210ENST00000552180 CYSLTR1Q9Y271 337 aa12.37□□□□□ -0.43
GPN3-210ENST00000552180 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
GPN3-210ENST00000552180 MALP21145 153 aa12.36□□□□□ -0.43
GPN3-210ENST00000552180 COX6A2Q02221 97 aa12.36□□□□□ -0.43
GPN3-210ENST00000552180 TMEM141Q96I45 108 aa12.36□□□□□ -0.43
GPN3-210ENST00000552180 PKHD1L1Q86WI1 4243 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms