RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 FAM229BQ4G0N7 80 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 MINOS1Q5TGZ0 78 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 ENHOQ6UWT2 76 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 UNQ9165/PRO28630Q6UXU0 137 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 SMIM11BQ8TCY0 68 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 Q9H8V8 135 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 ESM1Q9NQ30 184 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 IGHV3OR16-12A0A075B7B8 117 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 A0A0U1RQV1 116 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 A0A1W2PNU3 283 aaPredicted RBP3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 CCL21O00585 134 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 NCR3O14931 201 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 SAA4P35542 130 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 COX6A2Q02221 97 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 Q1T7F1 81 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 LINC00242Q5T6M2 205 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 Q8N9W7 124 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 CCL17Q92583 94 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 CACNA1EQ15878 2313 aa3.71□□□□□ -1.82
LSM3P2-201ENST00000551246 ZGRF1Q86YA3 2104 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3OR16-8A0A075B7F1 116 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3-66A0A0C4DH42 116 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 LCE6AA0A183 80 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 COX7A1P24310 79 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 CXCL6P80162 114 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 RBM3P98179 157 aaKnown RBP3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 ESRGQ1W209 222 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 DEFB104AQ8WTQ1 72 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 DNAJC13O75165 2243 aa3.7□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3-35A0A0C4DH35 117 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 E7EQL1 145 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 CRPP02741 224 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 HOXD3P31249 432 aaPredicted RBP3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 DEFB1P60022 68 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 C9orf66Q5T8R8 295 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 Q6ZQT0 140 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 C6orf223Q8N319 242 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 TMEM105Q8N8V8 129 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 WFDC9Q8NEX5 89 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 TM2D3Q9BRN9 247 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 LINC00467Q9BRT7 94 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 ORMDL1Q9P0S3 153 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 FAM215AQ9Y5M1 114 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 MINOS1-NBL1R4GNA1 71 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 CHD9Q3L8U1 2897 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 NACAE9PAV3 2078 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 UTRNP46939 3433 aa3.69□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV1OR15-1A0A075B7D0 117 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3OR16-13A0A075B7E8 117 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 A0A096LNT2 108 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3-74A0A0B4J1X5 117 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 TMEM89A2RUT3 159 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 A8MTW9 85 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 NDUFA4O00483 81 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 PRYO14603 147 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 LECT2O14960 151 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 CCL18P55774 89 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 LINC01547P58512 204 aaPredicted RBP3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 NANOS2P60321 138 aaKnown RBP3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 LMO4P61968 165 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 SNRPD3P62318 126 aaKnown RBP3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 PRB3Q04118 309 aaPredicted RBP3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 CLEC19AQ6UXS0 136 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 UBL5Q9BZL1 73 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 SNURFQ9Y675 71 aa3.68□□□□□ -1.82
LSM3P2-201ENST00000551246 CADP27708 2225 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 CHD7Q9P2D1 2997 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3-49A0A0A0MS15 119 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 F6UB75 175 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 K7EQG2 157 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV4-31P0DP07 118 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV4-38-2P0DP08 117 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 RPL36AP83881 106 aaKnown RBP3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 RPL36ALQ969Q0 106 aaKnown RBP3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 SND1-IT1Q9HBX3 110 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 MOB4Q9Y3A3 225 aa3.67□□□□□ -1.82
LSM3P2-201ENST00000551246 FAM186AA6NE01 2351 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 TRBV6-4A0A1B0GX49 114 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 K7EMT4 169 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 TMEM256-PLSCR3K7ERE1 68 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 ATP6V0E1O15342 81 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 LY6HO94772 140 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 IGHV3-53P01767 116 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 RNASE13Q5GAN3 156 aaKnown RBP3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 Q6ZVQ6 151 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 Q8N814 137 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 TMEM254Q8TBM7 123 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 MED13Q9UHV7 2174 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 ARHGAP32A7KAX9 2087 aa3.66□□□□□ -1.82
LSM3P2-201ENST00000551246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 K7EQD1 137 aa3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 PDE6GP18545 87 aa3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 NREPQ16612 68 aa3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 FAM74A4Q5TZK3 123 aa3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 Q6ZRP5 223 aa3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 ZCCHC13Q8WW36 166 aaKnown RBP3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 Q9UF83 564 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms