RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	GYPE	P15421	78 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285	MPV17L2	Q567V2	206 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285	ERAS	Q7Z444	233 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285	VSIG2	Q96IQ7	327 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285	PRO0255	Q9UI72	69 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285		A0A096LPF7	62 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285		F5H768	121 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285	ATP5G1	P05496	136 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285	TM2D3	Q9BRN9	247 aa		10.18	□□□□□ -0.78
PDE1B-206	ENST00000550285	BAALC	Q8WXS3	180 aa		10.17	□□□□□ -0.78
PDE1B-206	ENST00000550285	LINC00694	P0DN24	101 aa		10.17	□□□□□ -0.78
PDE1B-206	ENST00000550285	ODF1	Q14990	250 aa		10.17	□□□□□ -0.78
PDE1B-206	ENST00000550285	DAZ4	Q86SG3	579 aa	Known RBP	10.17	□□□□□ -0.78
PDE1B-206	ENST00000550285	ZMAT4	Q9H898	229 aa		10.17	□□□□□ -0.78
PDE1B-206	ENST00000550285	DAZ3	Q9NR90	486 aa	Known RBP	10.17	□□□□□ -0.78
PDE1B-206	ENST00000550285	TRAV26-1	A0A087WT03	109 aa		10.16	□□□□□ -0.78
PDE1B-206	ENST00000550285	PAX4	O43316	350 aa		10.16	□□□□□ -0.78
PDE1B-206	ENST00000550285	GTF2H5	Q6ZYL4	71 aa		10.16	□□□□□ -0.78
PDE1B-206	ENST00000550285	FAM104A	Q969W3	186 aa		10.16	□□□□□ -0.78
PDE1B-206	ENST00000550285	SPATA25	Q9BR10	227 aa		10.16	□□□□□ -0.78
PDE1B-206	ENST00000550285	C11orf68	Q9H3H3	251 aa	Known RBP	10.16	□□□□□ -0.78
PDE1B-206	ENST00000550285	COX8A	P10176	69 aa		10.15	□□□□□ -0.78
PDE1B-206	ENST00000550285		Q6ZTC4	211 aa		10.15	□□□□□ -0.78
PDE1B-206	ENST00000550285	TP73-AS1	Q9UF72	201 aa		10.15	□□□□□ -0.78
PDE1B-206	ENST00000550285	NANOS2	P60321	138 aa	Known RBP	10.14	□□□□□ -0.79
PDE1B-206	ENST00000550285	MRPL35	Q9NZE8	188 aa	Known RBP	10.14	□□□□□ -0.79
PDE1B-206	ENST00000550285	GAGE10	A6NGK3	116 aa		10.14	□□□□□ -0.79
PDE1B-206	ENST00000550285	TCTA	P57738	103 aa		10.14	□□□□□ -0.79
PDE1B-206	ENST00000550285	RNASE13	Q5GAN3	156 aa	Known RBP	10.14	□□□□□ -0.79
PDE1B-206	ENST00000550285	TIMM17A	Q99595	171 aa		10.14	□□□□□ -0.79
PDE1B-206	ENST00000550285	TRAV8-6	A0A0B4J262	113 aa		10.13	□□□□□ -0.79
PDE1B-206	ENST00000550285	PRSS29P	A6NIE9	313 aa		10.13	□□□□□ -0.79
PDE1B-206	ENST00000550285	UBE2D4	Q9Y2X8	147 aa		10.13	□□□□□ -0.79
PDE1B-206	ENST00000550285	IGLV4-3	A0A075B6K6	122 aa		10.13	□□□□□ -0.79
PDE1B-206	ENST00000550285		A0A087WX48	190 aa		10.13	□□□□□ -0.79
PDE1B-206	ENST00000550285	TMEM141	Q96I45	108 aa		10.13	□□□□□ -0.79
PDE1B-206	ENST00000550285	ATP6V0E2	Q8NHE4	81 aa		10.12	□□□□□ -0.79
PDE1B-206	ENST00000550285	TEX48	A0A1B0GUV7	120 aa		10.11	□□□□□ -0.79
PDE1B-206	ENST00000550285	FGF6	P10767	208 aa		10.11	□□□□□ -0.79
PDE1B-206	ENST00000550285	SEC11A	P67812	179 aa		10.11	□□□□□ -0.79
PDE1B-206	ENST00000550285	C11orf45	Q8TAV5	145 aa		10.11	□□□□□ -0.79
PDE1B-206	ENST00000550285	GTSF1L	Q9H1H1	148 aa		10.11	□□□□□ -0.79
PDE1B-206	ENST00000550285	TRAV12-1	A0A0B4J245	112 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	C2orf91	Q6ZV80	131 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	MEGF8	Q7Z7M0	2845 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	PRKDC	P78527	4128 aa	Known RBP	10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	TRBV6-8	A0A0A6YYG3	113 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	LINC01549	A6NIU2	74 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	PMVK	Q15126	192 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	BOD1L2	Q8IYS8	172 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	PYGO1	Q9Y3Y4	419 aa		10.1	□□□□□ -0.79
PDE1B-206	ENST00000550285	IGKC	P01834	107 aa		10.09	□□□□□ -0.79
PDE1B-206	ENST00000550285		Q6ZUT4	128 aa		10.09	□□□□□ -0.79
PDE1B-206	ENST00000550285		F8VRH5	84 aa		10.09	□□□□□ -0.79
PDE1B-206	ENST00000550285	KRTAP21-3	Q3LHN1	58 aa		10.09	□□□□□ -0.79
PDE1B-206	ENST00000550285	SIGMAR1	Q99720	223 aa		10.09	□□□□□ -0.79
PDE1B-206	ENST00000550285	TMEM243	Q9BU79	118 aa		10.09	□□□□□ -0.79
PDE1B-206	ENST00000550285	IGLV4-69	A0A075B6H9	119 aa		10.08	□□□□□ -0.8
PDE1B-206	ENST00000550285	TRBV25-1	A0A075B6N4	114 aa		10.08	□□□□□ -0.8
PDE1B-206	ENST00000550285	DPM2	O94777	84 aa		10.08	□□□□□ -0.8
PDE1B-206	ENST00000550285	GAGE6	Q13070	117 aa		10.08	□□□□□ -0.8
PDE1B-206	ENST00000550285	OR5A1	Q8NGJ0	315 aa		10.08	□□□□□ -0.8
PDE1B-206	ENST00000550285		K7EP34	96 aa		10.07	□□□□□ -0.8
PDE1B-206	ENST00000550285	VCX2	Q9H322	139 aa		10.07	□□□□□ -0.8
PDE1B-206	ENST00000550285	SPANXA1	Q9NS26	97 aa		10.07	□□□□□ -0.8
PDE1B-206	ENST00000550285	C9orf118	A6NHY6	69 aa		10.07	□□□□□ -0.8
PDE1B-206	ENST00000550285		H3BRM9	83 aa		10.07	□□□□□ -0.8
PDE1B-206	ENST00000550285	SIVA1	O15304	175 aa		10.06	□□□□□ -0.8
PDE1B-206	ENST00000550285	AMELX	Q99217	191 aa		10.06	□□□□□ -0.8
PDE1B-206	ENST00000550285	B9D2	Q9BPU9	175 aa		10.06	□□□□□ -0.8
PDE1B-206	ENST00000550285	CHCHD5	Q9BSY4	110 aa		10.06	□□□□□ -0.8
PDE1B-206	ENST00000550285	DEFB131B	A0A096LNP1	70 aa		10.06	□□□□□ -0.8
PDE1B-206	ENST00000550285	C11orf86	A6NJI1	115 aa		10.06	□□□□□ -0.8
PDE1B-206	ENST00000550285	UBE2L6	O14933	153 aa		10.05	□□□□□ -0.8
PDE1B-206	ENST00000550285	MRPL23	Q16540	153 aa	Known RBP	10.05	□□□□□ -0.8
PDE1B-206	ENST00000550285	DGAT2L7P	Q6IED9	249 aa		10.05	□□□□□ -0.8
PDE1B-206	ENST00000550285		A0A0J9YXV3	536 aa		10.05	□□□□□ -0.8
PDE1B-206	ENST00000550285	MTURN	Q8N3F0	131 aa		10.05	□□□□□ -0.8
PDE1B-206	ENST00000550285	ICOS	Q9Y6W8	199 aa		10.05	□□□□□ -0.8
PDE1B-206	ENST00000550285	IGLV4-60	A0A075B6I1	120 aa		10.04	□□□□□ -0.8
PDE1B-206	ENST00000550285		Q8N3U1	123 aa		10.04	□□□□□ -0.8
PDE1B-206	ENST00000550285	TIMM21	Q9BVV7	248 aa		10.04	□□□□□ -0.8
PDE1B-206	ENST00000550285	STAB2	Q8WWQ8	2551 aa		10.04	□□□□□ -0.8
PDE1B-206	ENST00000550285	IGKV2D-26	A0A0A0MRZ7	120 aa		10.03	□□□□□ -0.8
PDE1B-206	ENST00000550285	PLN	P26678	52 aa		10.03	□□□□□ -0.8
PDE1B-206	ENST00000550285	NMU	P48645	174 aa		10.03	□□□□□ -0.8
PDE1B-206	ENST00000550285	PCP2	Q8IVA1	136 aa		10.03	□□□□□ -0.8
PDE1B-206	ENST00000550285		A6NDN8	102 aa		10.03	□□□□□ -0.8
PDE1B-206	ENST00000550285	HSD52	Q0P140	79 aa		10.03	□□□□□ -0.8
PDE1B-206	ENST00000550285	CDC42SE2	Q9NRR3	84 aa		10.03	□□□□□ -0.8
PDE1B-206	ENST00000550285	MRPS36	P82909	103 aa	Known RBP	10.02	□□□□□ -0.81
PDE1B-206	ENST00000550285	TMEM97	Q5BJF2	176 aa		10.02	□□□□□ -0.81
PDE1B-206	ENST00000550285	TTTY13	Q9BZ97	58 aa		10.02	□□□□□ -0.81
PDE1B-206	ENST00000550285	CSDC2	Q9Y534	153 aa	Known RBP	10.02	□□□□□ -0.81
PDE1B-206	ENST00000550285	TMEM262	E9PQX1	116 aa		10.01	□□□□□ -0.81
PDE1B-206	ENST00000550285	PAPPA-AS1	Q5QFB9	102 aa		10.01	□□□□□ -0.81
PDE1B-206	ENST00000550285	CHAC1	Q9BUX1	264 aa		10.01	□□□□□ -0.81
PDE1B-206	ENST00000550285	CKS1B	P61024	79 aa		10.01	□□□□□ -0.81
PDE1B-206	ENST00000550285	LYPD5	Q6UWN5	251 aa		10.01	□□□□□ -0.81
PDE1B-206	ENST00000550285		H7C423	109 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms