RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 STPG4Q8N801 248 aa12.53□□□□□ -0.4
SLC38A1-208ENST00000550173 TSKUQ8WUA8 353 aa12.53□□□□□ -0.4
SLC38A1-208ENST00000550173 TMEM191AQ9H0A3 160 aa12.53□□□□□ -0.4
SLC38A1-208ENST00000550173 hCG_2014768A0A024R1R8 64 aa12.52□□□□□ -0.41
SLC38A1-208ENST00000550173 LINC01551Q86U37 167 aa12.52□□□□□ -0.41
SLC38A1-208ENST00000550173 FAM210AQ96ND0 272 aa12.52□□□□□ -0.41
SLC38A1-208ENST00000550173 A0A096LNI7 61 aa12.51□□□□□ -0.41
SLC38A1-208ENST00000550173 IGHV1-58A0A0C4DH39 117 aa12.51□□□□□ -0.41
SLC38A1-208ENST00000550173 RAB4AP20338 218 aa12.51□□□□□ -0.41
SLC38A1-208ENST00000550173 POLR2KP53803 58 aaKnown RBP12.51□□□□□ -0.41
SLC38A1-208ENST00000550173 SS18Q15532 418 aa12.51□□□□□ -0.41
SLC38A1-208ENST00000550173 LINC00526Q96FQ7 95 aa12.51□□□□□ -0.41
SLC38A1-208ENST00000550173 ZNF727A8MUV8 499 aa12.5□□□□□ -0.41
SLC38A1-208ENST00000550173 MRPL52Q86TS9 123 aaKnown RBP12.5□□□□□ -0.41
SLC38A1-208ENST00000550173 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
SLC38A1-208ENST00000550173 OSTCQ9NRP0 149 aa12.5□□□□□ -0.41
SLC38A1-208ENST00000550173 CDC42SE2Q9NRR3 84 aa12.5□□□□□ -0.41
SLC38A1-208ENST00000550173 TRBV27A0A0K0K1C4 114 aa12.49□□□□□ -0.41
SLC38A1-208ENST00000550173 PKIGQ9Y2B9 76 aa12.49□□□□□ -0.41
SLC38A1-208ENST00000550173 C7orf77A4D0Y5 90 aa12.48□□□□□ -0.41
SLC38A1-208ENST00000550173 ZNF664Q8N3J9 261 aa12.48□□□□□ -0.41
SLC38A1-208ENST00000550173 CARD19Q96LW7 228 aa12.48□□□□□ -0.41
SLC38A1-208ENST00000550173 SMKR1H3BMG3 65 aa12.47□□□□□ -0.41
SLC38A1-208ENST00000550173 SRP19P09132 144 aaKnown RBP12.47□□□□□ -0.41
SLC38A1-208ENST00000550173 RIGQ13278 110 aa12.47□□□□□ -0.41
SLC38A1-208ENST00000550173 CD164L2Q6UWJ8 174 aa12.47□□□□□ -0.41
SLC38A1-208ENST00000550173 LINC00474Q9P2X8 69 aa12.47□□□□□ -0.41
SLC38A1-208ENST00000550173 ZNF561-AS1K7EIQ3 104 aa12.46□□□□□ -0.41
SLC38A1-208ENST00000550173 FCER1GP30273 86 aa12.46□□□□□ -0.41
SLC38A1-208ENST00000550173 PRR3P79522 188 aaKnown RBP12.46□□□□□ -0.41
SLC38A1-208ENST00000550173 V9GYV3 84 aa12.46□□□□□ -0.41
SLC38A1-208ENST00000550173 VCYO14598 125 aa12.45□□□□□ -0.42
SLC38A1-208ENST00000550173 SYCNQ0VAF6 134 aa12.45□□□□□ -0.42
SLC38A1-208ENST00000550173 NUP35Q8NFH5 326 aa12.44□□□□□ -0.42
SLC38A1-208ENST00000550173 PPP1R17O96001 155 aa12.43□□□□□ -0.42
SLC38A1-208ENST00000550173 UBR4Q5T4S7 5183 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 C1orf196B1AJZ1 125 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 MALP21145 153 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 CAMPP49913 170 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 SUMO2P61956 95 aaKnown RBP12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 NRACQ8N912 160 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 KIR2DL4Q99706 377 aa12.42□□□□□ -0.42
SLC38A1-208ENST00000550173 TMEM241Q24JQ0 296 aa12.41□□□□□ -0.42
SLC38A1-208ENST00000550173 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
SLC38A1-208ENST00000550173 NAT8BQ9UHF3 227 aa12.41□□□□□ -0.42
SLC38A1-208ENST00000550173 UBE2D4Q9Y2X8 147 aa12.41□□□□□ -0.42
SLC38A1-208ENST00000550173 IGLV4-69A0A075B6H9 119 aa12.4□□□□□ -0.42
SLC38A1-208ENST00000550173 COX7A2LO14548 114 aa12.4□□□□□ -0.42
SLC38A1-208ENST00000550173 LINC01600Q96MT4 127 aa12.4□□□□□ -0.42
SLC38A1-208ENST00000550173 CSDC2Q9Y534 153 aaKnown RBP12.4□□□□□ -0.42
SLC38A1-208ENST00000550173 TRAV13-1A0A0B4J241 112 aa12.39□□□□□ -0.43
SLC38A1-208ENST00000550173 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
SLC38A1-208ENST00000550173 PPP1R2P9O14990 202 aa12.39□□□□□ -0.43
SLC38A1-208ENST00000550173 RPL23P62829 140 aaKnown RBP12.39□□□□□ -0.43
SLC38A1-208ENST00000550173 FAM74A3Q4VXF1 159 aa12.39□□□□□ -0.43
SLC38A1-208ENST00000550173 PTTG1IPP53801 180 aa12.38□□□□□ -0.43
SLC38A1-208ENST00000550173 GAGE2BQ13066 116 aa12.38□□□□□ -0.43
SLC38A1-208ENST00000550173 ADIRFQ15847 76 aa12.38□□□□□ -0.43
SLC38A1-208ENST00000550173 MRPL51Q4U2R6 128 aaKnown RBP12.38□□□□□ -0.43
SLC38A1-208ENST00000550173 FAM104BQ5XKR9 115 aa12.38□□□□□ -0.43
SLC38A1-208ENST00000550173 TMEM18Q96B42 140 aa12.37□□□□□ -0.43
SLC38A1-208ENST00000550173 CAMK2N2Q96S95 79 aa12.37□□□□□ -0.43
SLC38A1-208ENST00000550173 SPINK6Q6UWN8 80 aa12.36□□□□□ -0.43
SLC38A1-208ENST00000550173 Q6ZRP5 223 aa12.36□□□□□ -0.43
SLC38A1-208ENST00000550173 Q6ZUT4 128 aa12.36□□□□□ -0.43
SLC38A1-208ENST00000550173 C5orf38Q86SI9 138 aa12.36□□□□□ -0.43
SLC38A1-208ENST00000550173 TIMM21Q9BVV7 248 aa12.35□□□□□ -0.43
SLC38A1-208ENST00000550173 NAT8Q9UHE5 227 aa12.35□□□□□ -0.43
SLC38A1-208ENST00000550173 SMIM27A0A1W2PRY6 76 aa12.34□□□□□ -0.43
SLC38A1-208ENST00000550173 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
SLC38A1-208ENST00000550173 CKS2P33552 79 aa12.34□□□□□ -0.43
SLC38A1-208ENST00000550173 REG3GQ6UW15 175 aa12.34□□□□□ -0.43
SLC38A1-208ENST00000550173 C20orf78Q9BR46 151 aa12.34□□□□□ -0.43
SLC38A1-208ENST00000550173 A0A0J9YXV3 536 aa12.33□□□□□ -0.44
SLC38A1-208ENST00000550173 A0A1B0GW15 77 aa12.33□□□□□ -0.44
SLC38A1-208ENST00000550173 C9JQL5 133 aa12.33□□□□□ -0.44
SLC38A1-208ENST00000550173 APOMO95445 188 aa12.33□□□□□ -0.44
SLC38A1-208ENST00000550173 C2orf48Q96LS8 159 aa12.33□□□□□ -0.44
SLC38A1-208ENST00000550173 TRBV24-1A0A075B6N3 115 aa12.32□□□□□ -0.44
SLC38A1-208ENST00000550173 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLC38A1-208ENST00000550173 TNXBP22105 4242 aa12.31□□□□□ -0.44
SLC38A1-208ENST00000550173 A0A1W2PNN7 141 aa12.31□□□□□ -0.44
SLC38A1-208ENST00000550173 TCAPO15273 167 aa12.31□□□□□ -0.44
SLC38A1-208ENST00000550173 TNFRSF6BO95407 300 aa12.31□□□□□ -0.44
SLC38A1-208ENST00000550173 RPL39P62891 51 aaKnown RBP12.31□□□□□ -0.44
SLC38A1-208ENST00000550173 RPL32P62910 135 aaKnown RBP12.31□□□□□ -0.44
SLC38A1-208ENST00000550173 SPAG11BQ08648 103 aa12.31□□□□□ -0.44
SLC38A1-208ENST00000550173 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.3□□□□□ -0.44
SLC38A1-208ENST00000550173 SRSF3P84103 164 aaKnown RBP12.3□□□□□ -0.44
SLC38A1-208ENST00000550173 RPL18AQ02543 176 aaKnown RBP12.3□□□□□ -0.44
SLC38A1-208ENST00000550173 ODF1Q14990 250 aa12.3□□□□□ -0.44
SLC38A1-208ENST00000550173 PEA15Q15121 130 aa12.3□□□□□ -0.44
SLC38A1-208ENST00000550173 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
SLC38A1-208ENST00000550173 SMIM2Q9BVW6 85 aa12.3□□□□□ -0.44
SLC38A1-208ENST00000550173 KRTAP10-8P60410 259 aa12.29□□□□□ -0.44
SLC38A1-208ENST00000550173 C9orf116Q5BN46 136 aaPredicted RBP12.29□□□□□ -0.44
SLC38A1-208ENST00000550173 OPRPNQ99935 248 aaPredicted RBP12.29□□□□□ -0.44
SLC38A1-208ENST00000550173 A0A1B0GVG6 124 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms