RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 C9JQL5 133 aa10.04□□□□□ -0.8
RAPGEF3-217ENST00000548434 PHOX2AO14813 284 aa10.04□□□□□ -0.8
RAPGEF3-217ENST00000548434 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
RAPGEF3-217ENST00000548434 ST20Q9HBF5 79 aa10.04□□□□□ -0.8
RAPGEF3-217ENST00000548434 LRP2P98164 4655 aa10.04□□□□□ -0.8
RAPGEF3-217ENST00000548434 hCG_2014768A0A024R1R8 64 aa10.03□□□□□ -0.8
RAPGEF3-217ENST00000548434 A0A096LNI7 61 aa10.03□□□□□ -0.8
RAPGEF3-217ENST00000548434 CCL25O15444 150 aa10.03□□□□□ -0.8
RAPGEF3-217ENST00000548434 NUP35Q8NFH5 326 aa10.03□□□□□ -0.8
RAPGEF3-217ENST00000548434 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
RAPGEF3-217ENST00000548434 MRAP2Q96G30 205 aa10.03□□□□□ -0.8
RAPGEF3-217ENST00000548434 ZNF727A8MUV8 499 aa10.02□□□□□ -0.81
RAPGEF3-217ENST00000548434 ISOC2Q96AB3 205 aa10.02□□□□□ -0.81
RAPGEF3-217ENST00000548434 EIF5A2Q9GZV4 153 aaKnown RBP10.02□□□□□ -0.81
RAPGEF3-217ENST00000548434 CSDC2Q9Y534 153 aaKnown RBP10.02□□□□□ -0.81
RAPGEF3-217ENST00000548434 SMKR1H3BMG3 65 aa10.01□□□□□ -0.81
RAPGEF3-217ENST00000548434 XCL1P47992 114 aa10.01□□□□□ -0.81
RAPGEF3-217ENST00000548434 CEBPGP53567 150 aa10.01□□□□□ -0.81
RAPGEF3-217ENST00000548434 ZNF664Q8N3J9 261 aa10.01□□□□□ -0.81
RAPGEF3-217ENST00000548434 LINC00526Q96FQ7 95 aa10.01□□□□□ -0.81
RAPGEF3-217ENST00000548434 IGHV1-58A0A0C4DH39 117 aa10□□□□□ -0.81
RAPGEF3-217ENST00000548434 A0A1B0GVG6 124 aa10□□□□□ -0.81
RAPGEF3-217ENST00000548434 RPL23P62829 140 aaKnown RBP10□□□□□ -0.81
RAPGEF3-217ENST00000548434 MAJINQ3KP22 176 aa10□□□□□ -0.81
RAPGEF3-217ENST00000548434 CD164L2Q6UWJ8 174 aa10□□□□□ -0.81
RAPGEF3-217ENST00000548434 PLA2G2DQ9UNK4 145 aa10□□□□□ -0.81
RAPGEF3-217ENST00000548434 PRR3P79522 188 aaKnown RBP9.99□□□□□ -0.81
RAPGEF3-217ENST00000548434 DPH3Q96FX2 82 aa9.99□□□□□ -0.81
RAPGEF3-217ENST00000548434 IGKV2-24A0A0C4DH68 120 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 SMIM27A0A1W2PRY6 76 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 C7orf77A4D0Y5 90 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 VCYO14598 125 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 SRSF3P84103 164 aaKnown RBP9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 STPG4Q8N801 248 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 TMEM101Q96IK0 257 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 BTF3L4Q96K17 158 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
RAPGEF3-217ENST00000548434 TRBV24-1A0A075B6N3 115 aa9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 SUMO2P61956 95 aaKnown RBP9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 TMEM241Q24JQ0 296 aa9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 MRPL51Q4U2R6 128 aaKnown RBP9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 FAM74A3Q4VXF1 159 aa9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 FAM104BQ5XKR9 115 aa9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 BORCS7Q96B45 105 aa9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 LINC01600Q96MT4 127 aa9.97□□□□□ -0.81
RAPGEF3-217ENST00000548434 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.82
RAPGEF3-217ENST00000548434 RIGQ13278 110 aa9.96□□□□□ -0.82
RAPGEF3-217ENST00000548434 SS18Q15532 418 aa9.96□□□□□ -0.82
RAPGEF3-217ENST00000548434 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
RAPGEF3-217ENST00000548434 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
RAPGEF3-217ENST00000548434 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
RAPGEF3-217ENST00000548434 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
RAPGEF3-217ENST00000548434 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
RAPGEF3-217ENST00000548434 NAT8BQ9UHF3 227 aa9.94□□□□□ -0.82
RAPGEF3-217ENST00000548434 A0A1B0GXF2 115 aa9.93□□□□□ -0.82
RAPGEF3-217ENST00000548434 C1orf196B1AJZ1 125 aa9.93□□□□□ -0.82
RAPGEF3-217ENST00000548434 PPP1R17O96001 155 aa9.93□□□□□ -0.82
RAPGEF3-217ENST00000548434 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
RAPGEF3-217ENST00000548434 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
RAPGEF3-217ENST00000548434 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 A0A1W2PNN7 141 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 LINC00862A6NCI5 91 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 PTTG1IPP53801 180 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 ODF1Q14990 250 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 Q6ZUT4 128 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 NAT8Q9UHE5 227 aa9.92□□□□□ -0.82
RAPGEF3-217ENST00000548434 CAMPP49913 170 aa9.91□□□□□ -0.82
RAPGEF3-217ENST00000548434 PPP1R2P9O14990 202 aa9.9□□□□□ -0.82
RAPGEF3-217ENST00000548434 RPL39P62891 51 aaKnown RBP9.9□□□□□ -0.82
RAPGEF3-217ENST00000548434 ADIRFQ15847 76 aa9.9□□□□□ -0.82
RAPGEF3-217ENST00000548434 C2orf48Q96LS8 159 aa9.9□□□□□ -0.82
RAPGEF3-217ENST00000548434 IGHV3OR16-9A0A0B4J2B5 98 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 COX7A2LO14548 114 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 FCER1GP30273 86 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 KIR2DL4Q99706 377 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 SMDT1Q9H4I9 107 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
RAPGEF3-217ENST00000548434 A0A0J9YXV3 536 aa9.88□□□□□ -0.83
RAPGEF3-217ENST00000548434 A0A1B0GW15 77 aa9.88□□□□□ -0.83
RAPGEF3-217ENST00000548434 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
RAPGEF3-217ENST00000548434 C5orf38Q86SI9 138 aa9.88□□□□□ -0.83
RAPGEF3-217ENST00000548434 OPRPNQ99935 248 aaPredicted RBP9.88□□□□□ -0.83
RAPGEF3-217ENST00000548434 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
RAPGEF3-217ENST00000548434 LOC107984640A0A0U1RRK4 108 aa9.87□□□□□ -0.83
RAPGEF3-217ENST00000548434 NPYP01303 97 aa9.87□□□□□ -0.83
RAPGEF3-217ENST00000548434 MRPS36P82909 103 aaKnown RBP9.87□□□□□ -0.83
RAPGEF3-217ENST00000548434 RNF151Q2KHN1 245 aa9.87□□□□□ -0.83
RAPGEF3-217ENST00000548434 SMIM2Q9BVW6 85 aa9.87□□□□□ -0.83
RAPGEF3-217ENST00000548434 PKIGQ9Y2B9 76 aa9.87□□□□□ -0.83
RAPGEF3-217ENST00000548434 CKS2P33552 79 aa9.86□□□□□ -0.83
RAPGEF3-217ENST00000548434 Q6ZRP5 223 aa9.86□□□□□ -0.83
RAPGEF3-217ENST00000548434 D6R8Y8 96 aa9.85□□□□□ -0.83
RAPGEF3-217ENST00000548434 APOMO95445 188 aa9.85□□□□□ -0.83
RAPGEF3-217ENST00000548434 SMAGPQ0VAQ4 97 aa9.85□□□□□ -0.83
RAPGEF3-217ENST00000548434 PEA15Q15121 130 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms