RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 LINC00959A0A1B0GUT2 108 aa13.54□□□□□ -0.24
USP44-204ENST00000547951 CCL25O15444 150 aa13.54□□□□□ -0.24
USP44-204ENST00000547951 NDUFS6O75380 124 aaKnown RBP13.54□□□□□ -0.24
USP44-204ENST00000547951 ZNF25P17030 456 aaPredicted RBP13.54□□□□□ -0.24
USP44-204ENST00000547951 NUP35Q8NFH5 326 aa13.54□□□□□ -0.24
USP44-204ENST00000547951 PLAC8Q9NZF1 115 aa13.54□□□□□ -0.24
USP44-204ENST00000547951 ISOC2Q96AB3 205 aa13.53□□□□□ -0.24
USP44-204ENST00000547951 IGKV2-24A0A0C4DH68 120 aa13.52□□□□□ -0.25
USP44-204ENST00000547951 TRBV27A0A0K0K1C4 114 aa13.52□□□□□ -0.25
USP44-204ENST00000547951 MRAP2Q96G30 205 aa13.52□□□□□ -0.25
USP44-204ENST00000547951 TMEM101Q96IK0 257 aa13.52□□□□□ -0.25
USP44-204ENST00000547951 BTF3L4Q96K17 158 aa13.52□□□□□ -0.25
USP44-204ENST00000547951 RPL23P62829 140 aaKnown RBP13.51□□□□□ -0.25
USP44-204ENST00000547951 SRSF3P84103 164 aaKnown RBP13.51□□□□□ -0.25
USP44-204ENST00000547951 NRACQ8N912 160 aa13.51□□□□□ -0.25
USP44-204ENST00000547951 CDC42SE2Q9NRR3 84 aa13.51□□□□□ -0.25
USP44-204ENST00000547951 PHOX2AO14813 284 aa13.5□□□□□ -0.25
USP44-204ENST00000547951 MT1HL1P0DM35 61 aa13.5□□□□□ -0.25
USP44-204ENST00000547951 MAJINQ3KP22 176 aa13.5□□□□□ -0.25
USP44-204ENST00000547951 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
USP44-204ENST00000547951 A0A096LNI7 61 aa13.49□□□□□ -0.25
USP44-204ENST00000547951 RIGQ13278 110 aa13.49□□□□□ -0.25
USP44-204ENST00000547951 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
USP44-204ENST00000547951 C7orf77A4D0Y5 90 aa13.48□□□□□ -0.25
USP44-204ENST00000547951 ADIRFQ15847 76 aa13.48□□□□□ -0.25
USP44-204ENST00000547951 RNASE13Q5GAN3 156 aaKnown RBP13.48□□□□□ -0.25
USP44-204ENST00000547951 SERTAD4-AS1Q5TG53 156 aa13.48□□□□□ -0.25
USP44-204ENST00000547951 ZNF664Q8N3J9 261 aa13.48□□□□□ -0.25
USP44-204ENST00000547951 MRPL51Q4U2R6 128 aaKnown RBP13.46□□□□□ -0.25
USP44-204ENST00000547951 STPG4Q8N801 248 aa13.46□□□□□ -0.25
USP44-204ENST00000547951 IGHV1-58A0A0C4DH39 117 aa13.45□□□□□ -0.26
USP44-204ENST00000547951 VCYO14598 125 aa13.45□□□□□ -0.26
USP44-204ENST00000547951 FCER1GP30273 86 aa13.45□□□□□ -0.26
USP44-204ENST00000547951 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
USP44-204ENST00000547951 SS18Q15532 418 aa13.45□□□□□ -0.26
USP44-204ENST00000547951 NAT8BQ9UHF3 227 aa13.45□□□□□ -0.26
USP44-204ENST00000547951 FAM74A3Q4VXF1 159 aa13.44□□□□□ -0.26
USP44-204ENST00000547951 FAM104BQ5XKR9 115 aa13.44□□□□□ -0.26
USP44-204ENST00000547951 CD164L2Q6UWJ8 174 aa13.44□□□□□ -0.26
USP44-204ENST00000547951 Q6ZRU5 148 aa13.44□□□□□ -0.26
USP44-204ENST00000547951 UBE2D4Q9Y2X8 147 aa13.44□□□□□ -0.26
USP44-204ENST00000547951 SMIM27A0A1W2PRY6 76 aa13.43□□□□□ -0.26
USP44-204ENST00000547951 CAMPP49913 170 aa13.43□□□□□ -0.26
USP44-204ENST00000547951 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
USP44-204ENST00000547951 NAT8Q9UHE5 227 aa13.43□□□□□ -0.26
USP44-204ENST00000547951 C7orf33Q8WU49 177 aa13.42□□□□□ -0.26
USP44-204ENST00000547951 Q6ZUT4 128 aa13.41□□□□□ -0.26
USP44-204ENST00000547951 PLA2G2DQ9UNK4 145 aa13.41□□□□□ -0.26
USP44-204ENST00000547951 PRR3P79522 188 aaKnown RBP13.4□□□□□ -0.26
USP44-204ENST00000547951 TNXBP22105 4242 aa13.39□□□□□ -0.27
USP44-204ENST00000547951 TRAV13-1A0A0B4J241 112 aa13.39□□□□□ -0.27
USP44-204ENST00000547951 SYCNQ0VAF6 134 aa13.39□□□□□ -0.27
USP44-204ENST00000547951 IGLV4-69A0A075B6H9 119 aa13.38□□□□□ -0.27
USP44-204ENST00000547951 ZNF561-AS1K7EIQ3 104 aa13.38□□□□□ -0.27
USP44-204ENST00000547951 PPP1R17O96001 155 aa13.38□□□□□ -0.27
USP44-204ENST00000547951 RPL39P62891 51 aaKnown RBP13.38□□□□□ -0.27
USP44-204ENST00000547951 MRPL54Q6P161 138 aaKnown RBP13.38□□□□□ -0.27
USP44-204ENST00000547951 FAM104AQ969W3 186 aa13.38□□□□□ -0.27
USP44-204ENST00000547951 KIR2DL4Q99706 377 aa13.38□□□□□ -0.27
USP44-204ENST00000547951 CSDC2Q9Y534 153 aaKnown RBP13.38□□□□□ -0.27
USP44-204ENST00000547951 C1orf196B1AJZ1 125 aa13.37□□□□□ -0.27
USP44-204ENST00000547951 PEA15Q15121 130 aa13.37□□□□□ -0.27
USP44-204ENST00000547951 UBR4Q5T4S7 5183 aa13.36□□□□□ -0.27
USP44-204ENST00000547951 COX7A2LO14548 114 aa13.36□□□□□ -0.27
USP44-204ENST00000547951 PPP1R2P9O14990 202 aa13.36□□□□□ -0.27
USP44-204ENST00000547951 CKS2P33552 79 aa13.36□□□□□ -0.27
USP44-204ENST00000547951 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
USP44-204ENST00000547951 TRBV24-1A0A075B6N3 115 aa13.35□□□□□ -0.27
USP44-204ENST00000547951 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
USP44-204ENST00000547951 MALP21145 153 aa13.35□□□□□ -0.27
USP44-204ENST00000547951 OPRPNQ99935 248 aaPredicted RBP13.35□□□□□ -0.27
USP44-204ENST00000547951 C20orf78Q9BR46 151 aa13.35□□□□□ -0.27
USP44-204ENST00000547951 A0A1B0GXF2 115 aa13.34□□□□□ -0.27
USP44-204ENST00000547951 D6R8Y8 96 aa13.34□□□□□ -0.27
USP44-204ENST00000547951 NPYP01303 97 aa13.34□□□□□ -0.27
USP44-204ENST00000547951 TIMM21Q9BVV7 248 aa13.34□□□□□ -0.27
USP44-204ENST00000547951 LINC00862A6NCI5 91 aa13.33□□□□□ -0.28
USP44-204ENST00000547951 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
USP44-204ENST00000547951 ODF1Q14990 250 aa13.33□□□□□ -0.28
USP44-204ENST00000547951 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.28
USP44-204ENST00000547951 LINC00474Q9P2X8 69 aa13.33□□□□□ -0.28
USP44-204ENST00000547951 A0A1B0GW15 77 aa13.32□□□□□ -0.28
USP44-204ENST00000547951 RPL32P62910 135 aaKnown RBP13.32□□□□□ -0.28
USP44-204ENST00000547951 HBBP68871 147 aa13.32□□□□□ -0.28
USP44-204ENST00000547951 GAGE2BQ13066 116 aa13.32□□□□□ -0.28
USP44-204ENST00000547951 TCAPO15273 167 aa13.31□□□□□ -0.28
USP44-204ENST00000547951 A0A0J9YXV3 536 aa13.3□□□□□ -0.28
USP44-204ENST00000547951 A0A1W2PNN7 141 aa13.3□□□□□ -0.28
USP44-204ENST00000547951 SMAGPQ0VAQ4 97 aa13.3□□□□□ -0.28
USP44-204ENST00000547951 CAMK2N2Q96S95 79 aa13.3□□□□□ -0.28
USP44-204ENST00000547951 SMDT1Q9H4I9 107 aa13.3□□□□□ -0.28
USP44-204ENST00000547951 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
USP44-204ENST00000547951 TMEM18Q96B42 140 aa13.29□□□□□ -0.28
USP44-204ENST00000547951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.28□□□□□ -0.28
USP44-204ENST00000547951 PKIGQ9Y2B9 76 aa13.28□□□□□ -0.28
USP44-204ENST00000547951 F8W036 122 aa13.27□□□□□ -0.29
USP44-204ENST00000547951 SPAG11BQ08648 103 aa13.27□□□□□ -0.29
USP44-204ENST00000547951 C2orf48Q96LS8 159 aa13.27□□□□□ -0.29
USP44-204ENST00000547951 APOMO95445 188 aa13.26□□□□□ -0.29
USP44-204ENST00000547951 LINC01600Q96MT4 127 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms