RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 HLA-DQA1P01909 254 aa7.76□□□□□ -1.17
YBX3-217ENST00000546164 RPL32P62910 135 aaKnown RBP7.76□□□□□ -1.17
YBX3-217ENST00000546164 AMMECR1LQ6DCA0 310 aa7.76□□□□□ -1.17
YBX3-217ENST00000546164 MRPL52Q86TS9 123 aaKnown RBP7.76□□□□□ -1.17
YBX3-217ENST00000546164 C20orf78Q9BR46 151 aa7.76□□□□□ -1.17
YBX3-217ENST00000546164 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
YBX3-217ENST00000546164 IGLV10-54A0A075B6I4 117 aa7.75□□□□□ -1.17
YBX3-217ENST00000546164 TMEM218A2RU14 115 aa7.75□□□□□ -1.17
YBX3-217ENST00000546164 C7orf77A4D0Y5 90 aa7.75□□□□□ -1.17
YBX3-217ENST00000546164 PPBPP02775 128 aa7.75□□□□□ -1.17
YBX3-217ENST00000546164 ADCYAP1P18509 176 aa7.75□□□□□ -1.17
YBX3-217ENST00000546164 CKS2P33552 79 aa7.75□□□□□ -1.17
YBX3-217ENST00000546164 RNASEKQ6P5S7 137 aaKnown RBP7.75□□□□□ -1.17
YBX3-217ENST00000546164 Q6ZSA8 131 aa7.75□□□□□ -1.17
YBX3-217ENST00000546164 PHOX2AO14813 284 aa7.74□□□□□ -1.17
YBX3-217ENST00000546164 CLRN3Q8NCR9 226 aa7.74□□□□□ -1.17
YBX3-217ENST00000546164 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
YBX3-217ENST00000546164 KIR2DL4Q99706 377 aa7.74□□□□□ -1.17
YBX3-217ENST00000546164 D6R8Y8 96 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 TCAPO15273 167 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 TNFRSF6BO95407 300 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 PRSS1P07477 247 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 FCER1GP30273 86 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 OR5A1Q8NGJ0 315 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 TMEM101Q96IK0 257 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 IMMP2LQ96T52 175 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 FAM30AQ9NZY2 134 aa7.73□□□□□ -1.17
YBX3-217ENST00000546164 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
YBX3-217ENST00000546164 SEC11CQ9BY50 192 aa7.72□□□□□ -1.17
YBX3-217ENST00000546164 CDC42SE2Q9NRR3 84 aa7.72□□□□□ -1.17
YBX3-217ENST00000546164 CSDC2Q9Y534 153 aaKnown RBP7.72□□□□□ -1.17
YBX3-217ENST00000546164 NPYP01303 97 aa7.71□□□□□ -1.18
YBX3-217ENST00000546164 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.18
YBX3-217ENST00000546164 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
YBX3-217ENST00000546164 ORMDL3Q8N138 153 aa7.71□□□□□ -1.18
YBX3-217ENST00000546164 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
YBX3-217ENST00000546164 CTDSP1Q9GZU7 261 aa7.71□□□□□ -1.18
YBX3-217ENST00000546164 IGKV3OR2-268A0A0C4DH90 116 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
YBX3-217ENST00000546164 LINC01620Q4KN68 170 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 TMEM136Q6ZRR5 245 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 COMMD7Q86VX2 200 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 ZNF664Q8N3J9 261 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 TIMM21Q9BVV7 248 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 LAMTOR2Q9Y2Q5 125 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 UBE2D4Q9Y2X8 147 aa7.7□□□□□ -1.18
YBX3-217ENST00000546164 LINC00959A0A1B0GUT2 108 aa7.69□□□□□ -1.18
YBX3-217ENST00000546164 PRSS47A8MTI9 375 aa7.69□□□□□ -1.18
YBX3-217ENST00000546164 EPM2AB3EWF7 344 aa7.69□□□□□ -1.18
YBX3-217ENST00000546164 C10orf91Q5T1B1 145 aa7.69□□□□□ -1.18
YBX3-217ENST00000546164 C9orf163Q8N9P6 203 aa7.69□□□□□ -1.18
YBX3-217ENST00000546164 TMEM18Q96B42 140 aa7.69□□□□□ -1.18
YBX3-217ENST00000546164 PRELID3AQ96N28 172 aa7.69□□□□□ -1.18
YBX3-217ENST00000546164 TRAV9-1A0A075B6T8 112 aa7.68□□□□□ -1.18
YBX3-217ENST00000546164 HAMPP81172 84 aa7.68□□□□□ -1.18
YBX3-217ENST00000546164 FOXI1Q12951 378 aa7.68□□□□□ -1.18
YBX3-217ENST00000546164 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
YBX3-217ENST00000546164 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
YBX3-217ENST00000546164 SRRM2Q9UQ35 2752 aaKnown RBP7.68□□□□□ -1.18
YBX3-217ENST00000546164 hDV102S1A0JD36 115 aa7.67□□□□□ -1.18
YBX3-217ENST00000546164 CCL25O15444 150 aa7.67□□□□□ -1.18
YBX3-217ENST00000546164 Q5VSD8 79 aa7.67□□□□□ -1.18
YBX3-217ENST00000546164 CHAC1Q9BUX1 264 aa7.67□□□□□ -1.18
YBX3-217ENST00000546164 AP5S1Q9NUS5 200 aa7.67□□□□□ -1.18
YBX3-217ENST00000546164 CARHSP1Q9Y2V2 147 aaKnown RBP7.67□□□□□ -1.18
YBX3-217ENST00000546164 GVQW2A0A096LPI5 108 aaPredicted RBP7.66□□□□□ -1.18
YBX3-217ENST00000546164 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
YBX3-217ENST00000546164 SLPIP03973 132 aa7.66□□□□□ -1.18
YBX3-217ENST00000546164 XCL1P47992 114 aa7.66□□□□□ -1.18
YBX3-217ENST00000546164 SS18Q15532 418 aa7.66□□□□□ -1.18
YBX3-217ENST00000546164 CD164L2Q6UWJ8 174 aa7.66□□□□□ -1.18
YBX3-217ENST00000546164 SCXQ7RTU7 201 aa7.66□□□□□ -1.18
YBX3-217ENST00000546164 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
YBX3-217ENST00000546164 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
YBX3-217ENST00000546164 C1orf196B1AJZ1 125 aa7.65□□□□□ -1.18
YBX3-217ENST00000546164 RPL39P62891 51 aaKnown RBP7.65□□□□□ -1.18
YBX3-217ENST00000546164 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.18
YBX3-217ENST00000546164 SDIM1Q6ZPB5 146 aa7.65□□□□□ -1.18
YBX3-217ENST00000546164 Q6ZUT4 128 aa7.65□□□□□ -1.18
YBX3-217ENST00000546164 FAM104AQ969W3 186 aa7.65□□□□□ -1.18
YBX3-217ENST00000546164 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.18
YBX3-217ENST00000546164 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
YBX3-217ENST00000546164 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
YBX3-217ENST00000546164 RAB5AP20339 215 aa7.64□□□□□ -1.19
YBX3-217ENST00000546164 RHEBQ15382 184 aa7.64□□□□□ -1.19
YBX3-217ENST00000546164 Q8N8P6 123 aa7.64□□□□□ -1.19
YBX3-217ENST00000546164 IGHV1-58A0A0C4DH39 117 aa7.63□□□□□ -1.19
YBX3-217ENST00000546164 K7EMI3 77 aa7.63□□□□□ -1.19
YBX3-217ENST00000546164 S100PP25815 95 aa7.63□□□□□ -1.19
YBX3-217ENST00000546164 CIRBP-AS1Q8TBR5 109 aa7.63□□□□□ -1.19
YBX3-217ENST00000546164 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
YBX3-217ENST00000546164 PYGO1Q9Y3Y4 419 aa7.63□□□□□ -1.19
YBX3-217ENST00000546164 IGHV3-64A0A075B6Q5 118 aa7.62□□□□□ -1.19
YBX3-217ENST00000546164 LOC389332A0A1B0GUA5 103 aa7.62□□□□□ -1.19
YBX3-217ENST00000546164 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
YBX3-217ENST00000546164 HIGD2BQ4VC39 106 aa7.62□□□□□ -1.19
YBX3-217ENST00000546164 RNASE13Q5GAN3 156 aaKnown RBP7.62□□□□□ -1.19
YBX3-217ENST00000546164 GNB1LQ9BYB4 327 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms