RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 TSHBP01222 138 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 IGHV3-53P01767 116 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 DAZ2Q13117 558 aaKnown RBP4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 C5orf47Q569G3 176 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 Q6ZTI0 123 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 MAPKAPK5-AS1Q8N8E1 139 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 C16orf74Q96GX8 76 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 PRADC1Q9BSG0 188 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 MRPL16Q9NX20 251 aaKnown RBP4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 IGLV4-69A0A075B6H9 119 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 IGHV4-28A0A0C4DH34 117 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 A0A1W2PPM0 123 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 H3BUT2 72 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 RS1O15537 224 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 TCTAP57738 103 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 RRN3P1Q2M238 152 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 SCGB1D4Q6XE38 83 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 Q6ZVH6 145 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 SPANXA1Q9NS26 97 aa4.97□□□□□ -1.61
HMGCS2-204ENST00000544913 TRBV10-1A0A0K0K1A3 114 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 A0A1B0GWB2 263 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 GAGE12BA1L429 117 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 SMIM9A6NGZ8 99 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 K7EP34 96 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 P0DMU3 169 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 FAM231AP0DMU4 169 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 FAM231CP0DMU5 169 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 RPL39P62891 51 aaKnown RBP4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 CFAP126Q5VTH2 177 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 NEGR1Q7Z3B1 354 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 PLEKHB2Q96CS7 222 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 TM2D3Q9BRN9 247 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 NOP10Q9NPE3 64 aaKnown RBP4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 SPANXB1Q9NS25 103 aaPredicted RBP4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 CELA1Q9UNI1 258 aa4.96□□□□□ -1.62
HMGCS2-204ENST00000544913 TRBV7-3A0A075B6L6 115 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 LEPROTO15243 131 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 DEFB4AO15263 64 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 FXYD2P54710 66 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 SRSF9Q13242 221 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 TMEM170BQ5T4T1 132 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 Q6ZSN1 163 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 AMELXQ99217 191 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 SIGMAR1Q99720 223 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 TIMM21Q9BVV7 248 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 Q9UF83 564 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 MIFP14174 115 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 LGALS3P17931 250 aaKnown RBP4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 C12orf74Q32Q52 190 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 TTTY13Q9BZ97 58 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 GEMIN7Q9H840 131 aaKnown RBP4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 NHP2Q9NX24 153 aaKnown RBP4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 SPCS1Q9Y6A9 102 aa4.95□□□□□ -1.62
HMGCS2-204ENST00000544913 IGLV4-3A0A075B6K6 122 aa4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 TRGV1A0A0A0MS02 117 aa4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 TMEM223A0PJW6 202 aa4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 J3QQQ9 107 aa4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 MRPS36P82909 103 aaKnown RBP4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 LYRM7Q5U5X0 104 aa4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 PHLDA1Q8WV24 401 aaPredicted RBP4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 RAB37Q96AX2 223 aa4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 DYNC2H1Q8NCM8 4307 aaKnown RBP4.94□□□□□ -1.62
HMGCS2-204ENST00000544913 TRAV4A0A0B4J268 109 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 F8WDY8 70 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 EMP1P54849 157 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 RPL36AP83881 106 aaKnown RBP4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 FAM222AQ5U5X8 452 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 DAZ4Q86SG3 579 aaKnown RBP4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 SLC25A29Q8N8R3 303 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 ZNRF2Q8NHG8 242 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 RPL36ALQ969Q0 106 aaKnown RBP4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 DAZ3Q9NR90 486 aaKnown RBP4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 A0A0J9YY99 117 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 TINCRA0A1B0GVN0 87 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 IGLL5B9A064 214 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 GAGE7O76087 117 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 GAGE12FP0CL80 117 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 GAGE12GP0CL81 117 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 GAGE12IP0CL82 117 aa4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 C11orf68Q9H3H3 251 aaKnown RBP4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 CSDC2Q9Y534 153 aaKnown RBP4.93□□□□□ -1.62
HMGCS2-204ENST00000544913 DNAH7Q8WXX0 4024 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 IGHV3-73A0A0B4J1V6 119 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 F8W1H4 67 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 H7C423 109 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 MRAPQ8TCY5 172 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 B9D2Q9BPU9 175 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 CHCHD7Q9BUK0 85 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 UBE2D4Q9Y2X8 147 aa4.92□□□□□ -1.62
HMGCS2-204ENST00000544913 TGP01266 2768 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 LYRM9A8MSI8 78 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 ZNF22P17026 224 aaPredicted RBP4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 UBE2D1P51668 147 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 TIRAPP58753 221 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 RPL24P83731 157 aaKnown RBP4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 DEFB121Q5J5C9 76 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 DGAT2L7PQ6IED9 249 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 SPATA25Q9BR10 227 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 GTSF1LQ9H1H1 148 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms