RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
SEMA4D-224ENST00000544513 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
SEMA4D-224ENST00000544513 A8MWL6 223 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 TMEM250H0YL14 139 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 PMCHP20382 165 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 IFITM2Q01629 132 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 ODF1Q14990 250 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 CT83Q5H943 113 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 TMEM101Q96IK0 257 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
SEMA4D-224ENST00000544513 GATCO43716 136 aaKnown RBP8.61□□□□□ -1.03
SEMA4D-224ENST00000544513 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
SEMA4D-224ENST00000544513 CD164L2Q6UWJ8 174 aa8.61□□□□□ -1.03
SEMA4D-224ENST00000544513 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
SEMA4D-224ENST00000544513 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
SEMA4D-224ENST00000544513 ST20Q9HBF5 79 aa8.61□□□□□ -1.03
SEMA4D-224ENST00000544513 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
SEMA4D-224ENST00000544513 MRAP2Q96G30 205 aa8.6□□□□□ -1.03
SEMA4D-224ENST00000544513 TMEM242Q9NWH2 141 aa8.6□□□□□ -1.03
SEMA4D-224ENST00000544513 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
SEMA4D-224ENST00000544513 SS18Q15532 418 aa8.59□□□□□ -1.03
SEMA4D-224ENST00000544513 CLLU1Q5K131 121 aa8.59□□□□□ -1.03
SEMA4D-224ENST00000544513 REG3GQ6UW15 175 aa8.59□□□□□ -1.03
SEMA4D-224ENST00000544513 Q6ZRP5 223 aa8.59□□□□□ -1.03
SEMA4D-224ENST00000544513 ZNF664Q8N3J9 261 aa8.59□□□□□ -1.03
SEMA4D-224ENST00000544513 TMEM191AQ9H0A3 160 aa8.59□□□□□ -1.03
SEMA4D-224ENST00000544513 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
SEMA4D-224ENST00000544513 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
SEMA4D-224ENST00000544513 ZNF561-AS1K7EIQ3 104 aa8.57□□□□□ -1.04
SEMA4D-224ENST00000544513 RAB4AP20338 218 aa8.57□□□□□ -1.04
SEMA4D-224ENST00000544513 CAMPP49913 170 aa8.57□□□□□ -1.04
SEMA4D-224ENST00000544513 TSKUQ8WUA8 353 aa8.57□□□□□ -1.04
SEMA4D-224ENST00000544513 C7orf77A4D0Y5 90 aa8.56□□□□□ -1.04
SEMA4D-224ENST00000544513 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
SEMA4D-224ENST00000544513 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
SEMA4D-224ENST00000544513 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
SEMA4D-224ENST00000544513 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
SEMA4D-224ENST00000544513 LOC107984640A0A0U1RRK4 108 aa8.55□□□□□ -1.04
SEMA4D-224ENST00000544513 C1orf196B1AJZ1 125 aa8.55□□□□□ -1.04
SEMA4D-224ENST00000544513 LINC01551Q86U37 167 aa8.55□□□□□ -1.04
SEMA4D-224ENST00000544513 NUP35Q8NFH5 326 aa8.55□□□□□ -1.04
SEMA4D-224ENST00000544513 BORCS7Q96B45 105 aa8.55□□□□□ -1.04
SEMA4D-224ENST00000544513 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
SEMA4D-224ENST00000544513 COX7A2LO14548 114 aa8.54□□□□□ -1.04
SEMA4D-224ENST00000544513 VCYO14598 125 aa8.54□□□□□ -1.04
SEMA4D-224ENST00000544513 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
SEMA4D-224ENST00000544513 NRACQ8N912 160 aa8.54□□□□□ -1.04
SEMA4D-224ENST00000544513 ISOC2Q96AB3 205 aa8.54□□□□□ -1.04
SEMA4D-224ENST00000544513 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
SEMA4D-224ENST00000544513 GAGE2BQ13066 116 aa8.53□□□□□ -1.04
SEMA4D-224ENST00000544513 PEA15Q15121 130 aa8.53□□□□□ -1.04
SEMA4D-224ENST00000544513 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
SEMA4D-224ENST00000544513 SMIM7Q9BQ49 75 aa8.53□□□□□ -1.04
SEMA4D-224ENST00000544513 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
SEMA4D-224ENST00000544513 LPAP08519 4548 aa8.52□□□□□ -1.05
SEMA4D-224ENST00000544513 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
SEMA4D-224ENST00000544513 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.52□□□□□ -1.05
SEMA4D-224ENST00000544513 APOMO95445 188 aa8.52□□□□□ -1.05
SEMA4D-224ENST00000544513 MALP21145 153 aa8.52□□□□□ -1.05
SEMA4D-224ENST00000544513 CEBPGP53567 150 aa8.52□□□□□ -1.05
SEMA4D-224ENST00000544513 SMDT1Q9H4I9 107 aa8.52□□□□□ -1.05
SEMA4D-224ENST00000544513 PPP1R17O96001 155 aa8.51□□□□□ -1.05
SEMA4D-224ENST00000544513 SUMO2P61956 95 aaKnown RBP8.51□□□□□ -1.05
SEMA4D-224ENST00000544513 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
SEMA4D-224ENST00000544513 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
SEMA4D-224ENST00000544513 V9GYV3 84 aa8.51□□□□□ -1.05
SEMA4D-224ENST00000544513 FCER1GP30273 86 aa8.5□□□□□ -1.05
SEMA4D-224ENST00000544513 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
SEMA4D-224ENST00000544513 RIGQ13278 110 aa8.5□□□□□ -1.05
SEMA4D-224ENST00000544513 RNF151Q2KHN1 245 aa8.5□□□□□ -1.05
SEMA4D-224ENST00000544513 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
SEMA4D-224ENST00000544513 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
SEMA4D-224ENST00000544513 CAMK2N2Q96S95 79 aa8.5□□□□□ -1.05
SEMA4D-224ENST00000544513 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
SEMA4D-224ENST00000544513 LINC00862A6NCI5 91 aa8.49□□□□□ -1.05
SEMA4D-224ENST00000544513 ZNF727A8MUV8 499 aa8.49□□□□□ -1.05
SEMA4D-224ENST00000544513 FAM104AQ969W3 186 aa8.49□□□□□ -1.05
SEMA4D-224ENST00000544513 PPP1R2P9O14990 202 aa8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 SRP19P09132 144 aaKnown RBP8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 FAM104BQ5XKR9 115 aa8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 UQCC3Q6UW78 93 aa8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 Q6ZUT4 128 aa8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 COMMD7Q86VX2 200 aa8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 KIR2DL4Q99706 377 aa8.48□□□□□ -1.05
SEMA4D-224ENST00000544513 TRBV24-1A0A075B6N3 115 aa8.47□□□□□ -1.05
SEMA4D-224ENST00000544513 MT-ND6P03923 174 aa8.47□□□□□ -1.05
SEMA4D-224ENST00000544513 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
SEMA4D-224ENST00000544513 MRPL51Q4U2R6 128 aaKnown RBP8.47□□□□□ -1.05
SEMA4D-224ENST00000544513 OR10D4PQ8NGN7 298 aa8.47□□□□□ -1.05
SEMA4D-224ENST00000544513 OPRPNQ99935 248 aaPredicted RBP8.47□□□□□ -1.05
SEMA4D-224ENST00000544513 C20orf78Q9BR46 151 aa8.47□□□□□ -1.05
SEMA4D-224ENST00000544513 SRSF3P84103 164 aaKnown RBP8.46□□□□□ -1.06
SEMA4D-224ENST00000544513 SPAG11BQ08648 103 aa8.46□□□□□ -1.06
SEMA4D-224ENST00000544513 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.06
SEMA4D-224ENST00000544513 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
SEMA4D-224ENST00000544513 NAT8BQ9UHF3 227 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms