RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 H0Y9J4 135 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 CTRLP40313 264 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 FOXI1Q12951 378 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 PHF5AQ7RTV0 110 aaKnown RBP6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 PGLYRP4Q96LB8 373 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 SMIM7Q9BQ49 75 aa6.78□□□□□ -1.32
AP000439.1-201ENST00000544004 ZNF727A8MUV8 499 aa6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 A8MWL6 223 aa6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 KRTAP1-4P0C5Y4 121 aa6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 UBE2D1P51668 147 aa6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 FOXA3P55318 350 aaPredicted RBP6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 SYCNQ0VAF6 134 aa6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 C9orf116Q5BN46 136 aaPredicted RBP6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 BORCS7Q96B45 105 aa6.77□□□□□ -1.33
AP000439.1-201ENST00000544004 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
AP000439.1-201ENST00000544004 LOC107984640A0A0U1RRK4 108 aa6.76□□□□□ -1.33
AP000439.1-201ENST00000544004 COTL1Q14019 142 aa6.76□□□□□ -1.33
AP000439.1-201ENST00000544004 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
AP000439.1-201ENST00000544004 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
AP000439.1-201ENST00000544004 FAM210AQ96ND0 272 aa6.76□□□□□ -1.33
AP000439.1-201ENST00000544004 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
AP000439.1-201ENST00000544004 SRP19P09132 144 aaKnown RBP6.75□□□□□ -1.33
AP000439.1-201ENST00000544004 XCL1P47992 114 aa6.75□□□□□ -1.33
AP000439.1-201ENST00000544004 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
AP000439.1-201ENST00000544004 TSPAN13O95857 204 aa6.74□□□□□ -1.33
AP000439.1-201ENST00000544004 RPL13AP40429 203 aaKnown RBP6.74□□□□□ -1.33
AP000439.1-201ENST00000544004 AMMECR1LQ6DCA0 310 aa6.74□□□□□ -1.33
AP000439.1-201ENST00000544004 RNASEKQ6P5S7 137 aaKnown RBP6.74□□□□□ -1.33
AP000439.1-201ENST00000544004 LINC01551Q86U37 167 aa6.74□□□□□ -1.33
AP000439.1-201ENST00000544004 RPL39LQ96EH5 51 aaKnown RBP6.74□□□□□ -1.33
AP000439.1-201ENST00000544004 CCL25O15444 150 aa6.73□□□□□ -1.33
AP000439.1-201ENST00000544004 FGF6P10767 208 aa6.73□□□□□ -1.33
AP000439.1-201ENST00000544004 TMEM241Q24JQ0 296 aa6.73□□□□□ -1.33
AP000439.1-201ENST00000544004 CT83Q5H943 113 aa6.73□□□□□ -1.33
AP000439.1-201ENST00000544004 TEX261Q6UWH6 196 aa6.73□□□□□ -1.33
AP000439.1-201ENST00000544004 TSKUQ8WUA8 353 aa6.73□□□□□ -1.33
AP000439.1-201ENST00000544004 A0A087WZ39 114 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 HIGD1CA8MV81 97 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 PMCHP20382 165 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 CAMPP49913 170 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 OR5A1Q8NGJ0 315 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 ISOC2Q96AB3 205 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
AP000439.1-201ENST00000544004 IGLV4-69A0A075B6H9 119 aa6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 LINC00959A0A1B0GUT2 108 aa6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 IGKV2-29A2NJV5 120 aaPredicted RBP6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 RPL18AQ02543 176 aaKnown RBP6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 PEA15Q15121 130 aa6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 ADIRFQ15847 76 aa6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 FAM74A3Q4VXF1 159 aa6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 KRTAP11-1Q8IUC1 163 aa6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
AP000439.1-201ENST00000544004 SDHAF1A6NFY7 115 aa6.7□□□□□ -1.34
AP000439.1-201ENST00000544004 C9JQL5 133 aa6.7□□□□□ -1.34
AP000439.1-201ENST00000544004 APOMO95445 188 aa6.7□□□□□ -1.34
AP000439.1-201ENST00000544004 APCSP02743 223 aa6.7□□□□□ -1.34
AP000439.1-201ENST00000544004 RIGQ13278 110 aa6.7□□□□□ -1.34
AP000439.1-201ENST00000544004 ST20Q9HBF5 79 aa6.7□□□□□ -1.34
AP000439.1-201ENST00000544004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 I3L3M4 83 aa6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 NCR2O95944 276 aa6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 RPL23P62829 140 aaKnown RBP6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 SRSF3P84103 164 aaKnown RBP6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 TMEM191AQ9H0A3 160 aa6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 NAT8Q9UHE5 227 aa6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 V9GYV3 84 aa6.69□□□□□ -1.34
AP000439.1-201ENST00000544004 H7C423 109 aa6.68□□□□□ -1.34
AP000439.1-201ENST00000544004 RAB4AP20338 218 aa6.68□□□□□ -1.34
AP000439.1-201ENST00000544004 CD164L2Q6UWJ8 174 aa6.68□□□□□ -1.34
AP000439.1-201ENST00000544004 AMN1Q8IY45 258 aa6.68□□□□□ -1.34
AP000439.1-201ENST00000544004 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
AP000439.1-201ENST00000544004 NAT8BQ9UHF3 227 aa6.68□□□□□ -1.34
AP000439.1-201ENST00000544004 CARHSP1Q9Y2V2 147 aaKnown RBP6.68□□□□□ -1.34
AP000439.1-201ENST00000544004 TRBV6-5A0A0K0K1A5 114 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 ZNF25P17030 456 aaPredicted RBP6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 SS18Q15532 418 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 MRAP2Q96G30 205 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 TMEM101Q96IK0 257 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 BTF3L4Q96K17 158 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 OPRPNQ99935 248 aaPredicted RBP6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 CDIP1Q9H305 208 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 TMEM242Q9NWH2 141 aa6.67□□□□□ -1.34
AP000439.1-201ENST00000544004 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
AP000439.1-201ENST00000544004 TSHBP01222 138 aa6.66□□□□□ -1.34
AP000439.1-201ENST00000544004 VCYO14598 125 aa6.65□□□□□ -1.34
AP000439.1-201ENST00000544004 MALP21145 153 aa6.65□□□□□ -1.34
AP000439.1-201ENST00000544004 FCER1GP30273 86 aa6.65□□□□□ -1.34
AP000439.1-201ENST00000544004 SMDT1Q9H4I9 107 aa6.65□□□□□ -1.34
AP000439.1-201ENST00000544004 SMIM27A0A1W2PRY6 76 aa6.64□□□□□ -1.35
AP000439.1-201ENST00000544004 POLR2KP53803 58 aaKnown RBP6.64□□□□□ -1.35
AP000439.1-201ENST00000544004 LINC01547P58512 204 aaPredicted RBP6.64□□□□□ -1.35
AP000439.1-201ENST00000544004 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
AP000439.1-201ENST00000544004 RETNLBQ9BQ08 111 aa6.64□□□□□ -1.35
AP000439.1-201ENST00000544004 PPP1R17O96001 155 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms